data_8FQ
# 
_chem_comp.id                                    8FQ 
_chem_comp.name                                  "~{N}-[(1~{S})-4-(2-fluoranylethanimidoylamino)-1-(4-methoxy-1-methyl-benzimidazol-2-yl)butyl]-3-oxidanylidene-1,2-dihydroisoindole-4-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H27 F N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-02-06 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        466.508 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8FQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5N0Y 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8FQ C27 C1  C 0 1 Y N N N N N -25.705 19.159 -26.257 0.214  -4.184 2.699  C27 8FQ 1  
8FQ C33 C2  C 0 1 Y N N N N N -18.691 17.291 -22.118 -5.204 3.503  -0.176 C33 8FQ 2  
8FQ C28 C3  C 0 1 Y N N N N N -25.239 18.418 -25.172 0.220  -2.839 2.376  C28 8FQ 3  
8FQ C26 C4  C 0 1 Y N N N N N -26.713 20.086 -26.078 -0.106 -5.131 1.741  C26 8FQ 4  
8FQ C32 C5  C 0 1 Y N N N N N -19.694 16.919 -22.990 -4.097 3.782  0.597  C32 8FQ 5  
8FQ C34 C6  C 0 1 Y N N N N N -18.897 17.325 -20.747 -5.252 2.351  -0.947 C34 8FQ 6  
8FQ C20 C7  C 0 1 Y N N N N N -26.750 19.522 -23.714 -0.424 -3.391 0.111  C20 8FQ 7  
8FQ C19 C8  C 0 1 Y N N N N N -25.745 18.575 -23.885 -0.098 -2.429 1.085  C19 8FQ 8  
8FQ C25 C9  C 0 1 Y N N N N N -27.213 20.248 -24.797 -0.423 -4.740 0.457  C25 8FQ 9  
8FQ C4  C10 C 0 1 Y N N N N N -21.126 16.584 -21.023 -3.059 1.737  -0.171 C4  8FQ 10 
8FQ C31 C11 C 0 1 Y N N N N N -20.893 16.580 -22.392 -3.019 2.905  0.606  C31 8FQ 11 
8FQ C3  C12 C 0 1 Y N N N N N -20.109 16.972 -20.164 -4.189 1.469  -0.956 C3  8FQ 12 
8FQ C6  C13 C 0 1 Y N N N N N -22.966 15.949 -21.867 -1.149 1.760  0.865  C6  8FQ 13 
8FQ C21 C14 C 0 1 N N N N N N -27.508 19.951 -22.511 -0.797 -3.277 -1.313 C21 8FQ 14 
8FQ C17 C15 C 0 1 N N N N N N -25.170 17.762 -22.777 -0.093 -0.990 0.738  C17 8FQ 15 
8FQ C13 C16 C 0 1 N N N N N N -24.103 9.788  -20.208 6.092  1.429  -0.727 C13 8FQ 16 
8FQ C24 C17 C 0 1 N N N N N N -28.270 21.186 -24.389 -0.808 -5.501 -0.787 C24 8FQ 17 
8FQ C14 C18 C 0 1 N N N N N N -24.582 9.041  -21.435 7.481  1.136  -0.220 C14 8FQ 18 
8FQ C30 C19 C 0 1 N N N N N N -22.295 16.025 -24.361 -1.295 3.910  2.177  C30 8FQ 19 
8FQ C1  C20 C 0 1 N N N N N N -19.388 17.329 -17.899 -5.431 0.131  -2.479 C1  8FQ 20 
8FQ C10 C21 C 0 1 N N N N N N -24.316 13.315 -21.057 2.649  1.306  0.728  C10 8FQ 21 
8FQ C9  C22 C 0 1 N N N N N N -24.478 14.101 -22.329 1.239  1.603  0.214  C9  8FQ 22 
8FQ C11 C23 C 0 1 N N N N N N -24.492 11.864 -21.393 3.663  1.558  -0.389 C11 8FQ 23 
8FQ C7  C24 C 0 1 N N S N N N -24.364 15.538 -22.011 0.225  1.351  1.332  C7  8FQ 24 
8FQ N5  N1  N 0 1 Y N N N N N -22.413 16.194 -20.695 -1.884 1.086  0.031  N5  8FQ 25 
8FQ N15 N2  N 0 1 N N N N N N -23.833 9.162  -19.113 5.918  1.827  -1.945 N15 8FQ 26 
8FQ N29 N3  N 0 1 Y N N N N N -22.089 16.172 -22.914 -1.798 2.893  1.251  N29 8FQ 27 
8FQ N23 N4  N 0 1 N N N N N N -28.257 21.024 -22.942 -1.020 -4.496 -1.835 N23 8FQ 28 
8FQ N16 N5  N 0 1 N N N N N N -25.036 16.384 -22.995 0.220  -0.073 1.675  N16 8FQ 29 
8FQ N12 N6  N 0 1 N N N N N N -23.978 11.138 -20.271 5.013  1.273  0.103  N12 8FQ 30 
8FQ O22 O1  O 0 1 N N N N N N -27.517 19.434 -21.402 -0.890 -2.231 -1.926 O22 8FQ 31 
8FQ O18 O2  O 0 1 N N N N N N -24.817 18.356 -21.759 -0.371 -0.636 -0.391 O18 8FQ 32 
8FQ O2  O3  O 0 1 N N N N N N -20.449 16.948 -18.788 -4.242 0.343  -1.714 O2  8FQ 33 
8FQ H1  H1  H 0 1 N N N N N N -25.278 19.008 -27.237 0.466  -4.497 3.701  H1  8FQ 34 
8FQ H2  H2  H 0 1 N N N N N N -17.723 17.562 -22.513 -6.042 4.184  -0.177 H2  8FQ 35 
8FQ H3  H3  H 0 1 N N N N N N -24.455 17.694 -25.337 0.470  -2.106 3.128  H3  8FQ 36 
8FQ H4  H4  H 0 1 N N N N N N -27.097 20.663 -26.906 -0.108 -6.179 2.001  H4  8FQ 37 
8FQ H5  H5  H 0 1 N N N N N N -19.552 16.895 -24.060 -4.067 4.681  1.194  H5  8FQ 38 
8FQ H6  H6  H 0 1 N N N N N N -18.085 17.638 -20.108 -6.127 2.141  -1.544 H6  8FQ 39 
8FQ H7  H7  H 0 1 N N N N N N -28.026 22.218 -24.680 -0.004 -6.179 -1.075 H7  8FQ 40 
8FQ H8  H8  H 0 1 N N N N N N -24.485 9.717  -22.298 7.703  1.786  0.626  H8  8FQ 41 
8FQ H9  H9  H 0 1 N N N N N N -23.924 8.170  -21.575 7.540  0.095  0.097  H9  8FQ 42 
8FQ H11 H11 H 0 1 N N N N N N -23.324 15.688 -24.553 -1.591 3.653  3.194  H11 8FQ 43 
8FQ H12 H12 H 0 1 N N N N N N -22.128 16.993 -24.855 -0.208 3.952  2.115  H12 8FQ 44 
8FQ H13 H13 H 0 1 N N N N N N -21.587 15.283 -24.759 -1.713 4.881  1.912  H13 8FQ 45 
8FQ H14 H14 H 0 1 N N N N N N -19.745 17.280 -16.860 -5.343 -0.802 -3.036 H14 8FQ 46 
8FQ H15 H15 H 0 1 N N N N N N -18.538 16.643 -18.028 -6.289 0.074  -1.808 H15 8FQ 47 
8FQ H16 H16 H 0 1 N N N N N N -19.068 18.356 -18.129 -5.567 0.958  -3.174 H16 8FQ 48 
8FQ H17 H17 H 0 1 N N N N N N -23.313 13.484 -20.637 2.871  1.956  1.574  H17 8FQ 49 
8FQ H18 H18 H 0 1 N N N N N N -25.077 13.625 -20.325 2.708  0.265  1.045  H18 8FQ 50 
8FQ H19 H19 H 0 1 N N N N N N -25.465 13.896 -22.769 1.179  2.645  -0.102 H19 8FQ 51 
8FQ H20 H20 H 0 1 N N N N N N -23.692 13.816 -23.044 1.016  0.953  -0.632 H20 8FQ 52 
8FQ H21 H21 H 0 1 N N N N N N -25.557 11.632 -21.544 3.440  0.908  -1.235 H21 8FQ 53 
8FQ H22 H22 H 0 1 N N N N N N -23.929 11.611 -22.303 3.604  2.599  -0.706 H22 8FQ 54 
8FQ H23 H23 H 0 1 N N N N N N -24.858 15.700 -21.042 0.499  1.936  2.210  H23 8FQ 55 
8FQ H24 H24 H 0 1 N N N N N N -23.543 9.785  -18.387 5.024  2.016  -2.271 H24 8FQ 56 
8FQ H25 H25 H 0 1 N N N N N N -25.403 15.976 -23.831 0.442  -0.355 2.576  H25 8FQ 57 
8FQ H26 H26 H 0 1 N N N N N N -23.523 11.629 -19.528 5.143  0.975  1.017  H26 8FQ 58 
8FQ F1  F1  F 0 1 N N N N N N -26.177 8.481  -21.396 8.408  1.367  -1.242 F1  8FQ 59 
8FQ H27 H27 H 0 1 N N N N N N -29.244 20.905 -24.816 -1.727 -6.061 -0.614 H27 8FQ 60 
8FQ H10 H10 H 0 1 N N N N N N -28.746 21.635 -22.319 -1.278 -4.680 -2.751 H10 8FQ 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8FQ C27 C26 DOUB Y N 1  
8FQ C27 C28 SING Y N 2  
8FQ C26 C25 SING Y N 3  
8FQ C28 C19 DOUB Y N 4  
8FQ C25 C24 SING N N 5  
8FQ C25 C20 DOUB Y N 6  
8FQ C24 N23 SING N N 7  
8FQ C30 N29 SING N N 8  
8FQ C19 C20 SING Y N 9  
8FQ C19 C17 SING N N 10 
8FQ C20 C21 SING N N 11 
8FQ N16 C17 SING N N 12 
8FQ N16 C7  SING N N 13 
8FQ C32 C31 DOUB Y N 14 
8FQ C32 C33 SING Y N 15 
8FQ N23 C21 SING N N 16 
8FQ N29 C31 SING Y N 17 
8FQ N29 C6  SING Y N 18 
8FQ C17 O18 DOUB N N 19 
8FQ C21 O22 DOUB N N 20 
8FQ C31 C4  SING Y N 21 
8FQ C9  C7  SING N N 22 
8FQ C9  C10 SING N N 23 
8FQ C33 C34 DOUB Y N 24 
8FQ C7  C6  SING N N 25 
8FQ C6  N5  DOUB Y N 26 
8FQ C14 C13 SING N N 27 
8FQ C11 C10 SING N N 28 
8FQ C11 N12 SING N N 29 
8FQ C4  N5  SING Y N 30 
8FQ C4  C3  DOUB Y N 31 
8FQ C34 C3  SING Y N 32 
8FQ N12 C13 SING N N 33 
8FQ C13 N15 DOUB N N 34 
8FQ C3  O2  SING N N 35 
8FQ O2  C1  SING N N 36 
8FQ C27 H1  SING N N 37 
8FQ C33 H2  SING N N 38 
8FQ C28 H3  SING N N 39 
8FQ C26 H4  SING N N 40 
8FQ C32 H5  SING N N 41 
8FQ C34 H6  SING N N 42 
8FQ C24 H7  SING N N 43 
8FQ C14 H8  SING N N 44 
8FQ C14 H9  SING N N 45 
8FQ C30 H11 SING N N 46 
8FQ C30 H12 SING N N 47 
8FQ C30 H13 SING N N 48 
8FQ C1  H14 SING N N 49 
8FQ C1  H15 SING N N 50 
8FQ C1  H16 SING N N 51 
8FQ C10 H17 SING N N 52 
8FQ C10 H18 SING N N 53 
8FQ C9  H19 SING N N 54 
8FQ C9  H20 SING N N 55 
8FQ C11 H21 SING N N 56 
8FQ C11 H22 SING N N 57 
8FQ C7  H23 SING N N 58 
8FQ N15 H24 SING N N 59 
8FQ N16 H25 SING N N 60 
8FQ N12 H26 SING N N 61 
8FQ C14 F1  SING N N 62 
8FQ C24 H27 SING N N 63 
8FQ N23 H10 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8FQ InChI            InChI                1.03  "InChI=1S/C24H27FN6O3/c1-31-17-9-4-10-18(34-2)21(17)30-22(31)16(8-5-11-27-19(26)12-25)29-23(32)15-7-3-6-14-13-28-24(33)20(14)15/h3-4,6-7,9-10,16H,5,8,11-13H2,1-2H3,(H2,26,27)(H,28,33)(H,29,32)/t16-/m0/s1" 
8FQ InChIKey         InChI                1.03  DMTSALXYYYZIBF-INIZCTEOSA-N                                                                                                                                                                                  
8FQ SMILES_CANONICAL CACTVS               3.385 "COc1cccc2n(C)c(nc12)[C@H](CCCNC(=N)CF)NC(=O)c3cccc4CNC(=O)c34"                                                                                                                                              
8FQ SMILES           CACTVS               3.385 "COc1cccc2n(C)c(nc12)[CH](CCCNC(=N)CF)NC(=O)c3cccc4CNC(=O)c34"                                                                                                                                               
8FQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "[H]/N=C(\CF)/NCCC[C@@H](c1nc2c(n1C)cccc2OC)NC(=O)c3cccc4c3C(=O)NC4"                                                                                                                                         
8FQ SMILES           "OpenEye OEToolkits" 2.0.6 "Cn1c2cccc(c2nc1C(CCCNC(=N)CF)NC(=O)c3cccc4c3C(=O)NC4)OC"                                                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           8FQ 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(1~{S})-4-(2-fluoranylethanimidoylamino)-1-(4-methoxy-1-methyl-benzimidazol-2-yl)butyl]-3-oxidanylidene-1,2-dihydroisoindole-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8FQ "Create component" 2017-02-06 EBI  
8FQ "Initial release"  2017-05-24 RCSB 
8FQ "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            8FQ 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C14 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
