data_5PQ
# 
_chem_comp.id                                    5PQ 
_chem_comp.name                                  "3-[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylamino]-4-oxidanyl-cyclobut-3-ene-1,2-dione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H17 N6 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2015-11-04 
_chem_comp.pdbx_modified_date                    2016-09-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        393.331 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5PQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5EKV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5PQ C4  C1  C 0 1 Y N N -0.133 -1.536 17.162 3.122  0.140  -0.212 C4  5PQ 1  
5PQ C5  C2  C 0 1 Y N N -0.801 -2.745 17.065 3.551  1.412  0.186  C5  5PQ 2  
5PQ C6  C3  C 0 1 N N N -2.158 -2.765 16.827 4.937  1.694  0.170  C6  5PQ 3  
5PQ C8  C4  C 0 1 Y N N 1.290  -3.165 17.438 1.390  1.383  0.348  C8  5PQ 4  
5PQ N1  N1  N 0 1 N N N -2.854 -1.560 16.685 5.786  0.721  -0.228 N1  5PQ 5  
5PQ N2  N2  N 0 1 N N N -2.789 0.805  16.657 6.193  -1.468 -1.003 N2  5PQ 6  
5PQ N3  N3  N 0 1 N N N -0.819 -0.379 17.022 4.023  -0.775 -0.589 N3  5PQ 7  
5PQ O6  O1  O 0 1 N N N -2.755 -3.837 16.740 5.355  2.789  0.508  O6  5PQ 8  
5PQ C2  C5  C 0 1 N N N -2.152 -0.355 16.788 5.308  -0.499 -0.604 C2  5PQ 9  
5PQ N7  N4  N 1 1 Y N N 0.096  -3.702 17.238 2.446  2.124  0.515  N7  5PQ 10 
5PQ CAA C6  C 0 1 N N N -0.192 -5.154 17.212 2.442  3.511  0.987  CAA 5PQ 11 
5PQ N9  N5  N 0 1 Y N N 1.153  -1.839 17.392 1.758  0.147  -0.101 N9  5PQ 12 
5PQ CAZ C7  C 0 1 N N R 2.272  -0.899 17.573 0.858  -0.967 -0.407 CAZ 5PQ 13 
5PQ OAN O2  O 0 1 N N N 3.422  -1.382 16.863 -0.491 -0.491 -0.606 OAN 5PQ 14 
5PQ CAX C8  C 0 1 N N R 2.713  -0.908 19.038 0.731  -1.917 0.811  CAX 5PQ 15 
5PQ OAH O3  O 0 1 N N N 2.154  0.223  19.711 1.776  -2.891 0.810  OAH 5PQ 16 
5PQ CAW C9  C 0 1 N N S 4.233  -0.759 18.965 -0.645 -2.582 0.561  CAW 5PQ 17 
5PQ OAG O4  O 0 1 N N N 4.624  0.466  19.589 -0.477 -3.859 -0.058 OAG 5PQ 18 
5PQ CAY C10 C 0 1 N N R 4.522  -0.683 17.464 -1.366 -1.611 -0.393 CAY 5PQ 19 
5PQ CAJ C11 C 0 1 N N N 5.827  -1.421 17.157 -2.675 -1.135 0.241  CAJ 5PQ 20 
5PQ NAL N6  N 0 1 N N N 5.543  -2.588 16.310 -3.402 -0.294 -0.713 NAL 5PQ 21 
5PQ CAQ C12 C 0 1 N N N 5.086  -3.583 17.064 -4.612 0.250  -0.364 CAQ 5PQ 22 
5PQ CAT C13 C 0 1 N N N 4.373  -4.909 16.790 -5.443 0.205  0.846  CAT 5PQ 23 
5PQ OAE O5  O 0 1 N N N 3.984  -5.495 15.781 -5.364 -0.316 1.942  OAE 5PQ 24 
5PQ CAS C14 C 0 1 N N N 4.343  -5.203 18.291 -6.421 1.070  0.147  CAS 5PQ 25 
5PQ OAD O6  O 0 1 N N N 3.921  -6.124 18.989 -7.496 1.569  0.423  OAD 5PQ 26 
5PQ CAP C15 C 0 1 N N N 5.057  -3.878 18.565 -5.532 1.069  -1.016 CAP 5PQ 27 
5PQ OAF O7  O 0 1 N N N 5.486  -3.229 19.681 -5.584 1.639  -2.240 OAF 5PQ 28 
5PQ H1  H1  H 0 1 N N N 2.210  -3.704 17.608 0.374  1.698  0.535  H1  5PQ 29 
5PQ H2  H2  H 0 1 N N N -3.839 -1.560 16.512 6.740  0.893  -0.251 H2  5PQ 30 
5PQ H3  H3  H 0 1 N N N -2.283 1.664  16.731 7.145  -1.280 -1.015 H3  5PQ 31 
5PQ H4  H4  H 0 1 N N N -3.774 0.818  16.484 5.868  -2.341 -1.273 H4  5PQ 32 
5PQ H5  H5  H 0 1 N N N 0.738  -5.716 17.384 2.364  4.185  0.133  H5  5PQ 33 
5PQ H6  H6  H 0 1 N N N -0.919 -5.398 18.001 1.592  3.666  1.651  H6  5PQ 34 
5PQ H7  H7  H 0 1 N N N -0.609 -5.427 16.232 3.367  3.714  1.526  H7  5PQ 35 
5PQ H8  H8  H 0 1 N N N 1.994  0.119  17.261 1.208  -1.512 -1.284 H8  5PQ 36 
5PQ H9  H9  H 0 1 N N N 2.438  -1.857 19.521 0.727  -1.354 1.744  H9  5PQ 37 
5PQ H10 H10 H 0 1 N N N 2.428  0.218  20.621 1.739  -3.508 1.553  H10 5PQ 38 
5PQ H11 H11 H 0 1 N N N 4.731  -1.631 19.413 -1.196 -2.682 1.496  H11 5PQ 39 
5PQ H12 H12 H 0 1 N N N 4.445  0.419  20.521 0.023  -4.492 0.475  H12 5PQ 40 
5PQ H13 H13 H 0 1 N N N 4.580  0.364  17.131 -1.571 -2.107 -1.342 H13 5PQ 41 
5PQ H14 H14 H 0 1 N N N 6.289  -1.755 18.098 -3.286 -1.998 0.504  H14 5PQ 42 
5PQ H15 H15 H 0 1 N N N 6.516  -0.744 16.630 -2.455 -0.558 1.139  H15 5PQ 43 
5PQ H16 H16 H 0 1 N N N 6.382  -2.877 15.849 -3.029 -0.123 -1.592 H16 5PQ 44 
5PQ H17 H17 H 0 1 N N N 5.280  -3.749 20.449 -6.379 2.166  -2.395 H17 5PQ 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5PQ OAE CAT DOUB N N 1  
5PQ NAL CAQ SING N N 2  
5PQ NAL CAJ SING N N 3  
5PQ N2  C2  SING N N 4  
5PQ N1  C2  SING N N 5  
5PQ N1  C6  SING N N 6  
5PQ O6  C6  DOUB N N 7  
5PQ C2  N3  DOUB N N 8  
5PQ CAT CAQ SING N N 9  
5PQ CAT CAS SING N N 10 
5PQ C6  C5  SING N N 11 
5PQ OAN CAY SING N N 12 
5PQ OAN CAZ SING N N 13 
5PQ N3  C4  SING N N 14 
5PQ CAQ CAP DOUB N N 15 
5PQ C5  C4  DOUB Y N 16 
5PQ C5  N7  SING Y N 17 
5PQ CAJ CAY SING N N 18 
5PQ C4  N9  SING Y N 19 
5PQ CAA N7  SING N N 20 
5PQ N7  C8  DOUB Y N 21 
5PQ N9  C8  SING Y N 22 
5PQ N9  CAZ SING N N 23 
5PQ CAY CAW SING N N 24 
5PQ CAZ CAX SING N N 25 
5PQ CAS CAP SING N N 26 
5PQ CAS OAD DOUB N N 27 
5PQ CAP OAF SING N N 28 
5PQ CAW CAX SING N N 29 
5PQ CAW OAG SING N N 30 
5PQ CAX OAH SING N N 31 
5PQ C8  H1  SING N N 32 
5PQ N1  H2  SING N N 33 
5PQ N2  H3  SING N N 34 
5PQ N2  H4  SING N N 35 
5PQ CAA H5  SING N N 36 
5PQ CAA H6  SING N N 37 
5PQ CAA H7  SING N N 38 
5PQ CAZ H8  SING N N 39 
5PQ CAX H9  SING N N 40 
5PQ OAH H10 SING N N 41 
5PQ CAW H11 SING N N 42 
5PQ OAG H12 SING N N 43 
5PQ CAY H13 SING N N 44 
5PQ CAJ H14 SING N N 45 
5PQ CAJ H15 SING N N 46 
5PQ NAL H16 SING N N 47 
5PQ OAF H17 SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5PQ InChI            InChI                1.03  "InChI=1S/C15H16N6O7/c1-20-3-21(12-6(20)13(27)19-15(16)18-12)14-11(26)7(22)4(28-14)2-17-5-8(23)10(25)9(5)24/h3-4,7,11,14,22,26H,2H2,1H3,(H4-,16,17,18,19,23,24,25,27)/p+1/t4-,7-,11-,14-/m1/s1" 
5PQ InChIKey         InChI                1.03  WRZJZJPEHQGNLE-CZCBHZRKSA-O                                                                                                                                                                     
5PQ SMILES_CANONICAL CACTVS               3.385 "C[n+]1cn([C@@H]2O[C@H](CNC3=C(O)C(=O)C3=O)[C@@H](O)[C@H]2O)c4N=C(N)NC(=O)c14"                                                                                                                  
5PQ SMILES           CACTVS               3.385 "C[n+]1cn([CH]2O[CH](CNC3=C(O)C(=O)C3=O)[CH](O)[CH]2O)c4N=C(N)NC(=O)c14"                                                                                                                        
5PQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C[n+]1cn(c2c1C(=O)NC(=N2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)CNC4=C(C(=O)C4=O)O)O)O"                                                                                                                
5PQ SMILES           "OpenEye OEToolkits" 2.0.4 "C[n+]1cn(c2c1C(=O)NC(=N2)N)C3C(C(C(O3)CNC4=C(C(=O)C4=O)O)O)O"                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5PQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "3-[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylamino]-4-oxidanyl-cyclobut-3-ene-1,2-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5PQ "Create component" 2015-11-04 EBI  
5PQ "Initial release"  2016-09-07 RCSB 
# 
