data_YXP
#

_chem_comp.id                                   YXP
_chem_comp.name                                 "{(5Z)-5-[(4-methoxyphenyl)methylidene]-2,4-dioxo-1,3-thiazolidin-3-yl}acetic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H11 N O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-04-06
_chem_comp.pdbx_modified_date                   2021-07-30
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       293.295
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YXP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7MDS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YXP  C4   C1   C  0  1  Y  N  N  -37.039   -8.050  18.301  -2.261  -0.271  -0.336  C4   YXP   1  
YXP  C5   C2   C  0  1  Y  N  N  -36.616   -8.839  17.223  -2.044   1.058   0.048  C5   YXP   2  
YXP  C6   C3   C  0  1  N  N  N  -35.228   -9.262  17.103  -0.675   1.572   0.183  C6   YXP   3  
YXP  C11  C4   C  0  1  N  N  N  -33.115  -10.007  16.066   1.794   1.013   0.375  C11  YXP   4  
YXP  C7   C5   C  0  1  N  N  N  -34.601   -9.993  16.162   0.358   0.712   0.369  C7   YXP   5  
YXP  C8   C6   C  0  1  N  N  N  -33.724  -11.493  14.326   2.041  -1.240   0.757  C8   YXP   6  
YXP  C9   C7   C  0  1  N  N  N  -31.344  -11.077  14.623   4.037   0.138   0.600  C9   YXP   7  
YXP  C10  C8   C  0  1  N  N  N  -30.737  -12.260  15.367   4.584  -0.033  -0.794  C10  YXP   8  
YXP  C12  C9   C  0  1  Y  N  N  -37.585   -9.184  16.271  -3.137   1.895   0.304  C12  YXP   9  
YXP  C13  C10  C  0  1  Y  N  N  -38.900   -8.771  16.387  -4.418   1.408   0.176  C13  YXP  10  
YXP  N1   N1   N  0  1  N  N  N  -32.728  -10.839  15.017   2.582  -0.030   0.578  N1   YXP  11  
YXP  C3   C11  C  0  1  Y  N  N  -38.352   -7.630  18.426  -3.546  -0.747  -0.461  C3   YXP  12  
YXP  C1   C12  C  0  1  N  N  N  -41.138   -7.199  18.799  -6.038  -1.753  -0.725  C1   YXP  13  
YXP  O1   O1   O  0  1  N  N  N  -40.609   -7.606  17.539  -5.894  -0.387  -0.330  O1   YXP  14  
YXP  C2   C13  C  0  1  Y  N  N  -39.293   -7.995  17.470  -4.628   0.088  -0.206  C2   YXP  15  
YXP  S1   S1   S  0  1  N  N  N  -35.268  -11.051  14.943   0.282  -1.037   0.663  S1   YXP  16  
YXP  O2   O2   O  0  1  N  N  N  -33.538  -12.270  13.412   2.640  -2.280   0.952  O2   YXP  17  
YXP  O3   O3   O  0  1  N  N  N  -31.548  -12.998  15.989   5.903   0.079  -1.016  O3   YXP  18  
YXP  O4   O4   O  0  1  N  N  N  -29.497  -12.382  15.292   3.835  -0.271  -1.712  O4   YXP  19  
YXP  O5   O5   O  0  1  N  N  N  -32.334   -9.402  16.786   2.227   2.137   0.202  O5   YXP  20  
YXP  H1   H1   H  0  1  N  N  N  -36.321   -7.762  19.055  -1.421  -0.919  -0.538  H1   YXP  21  
YXP  H2   H2   H  0  1  N  N  N  -34.590   -8.932  17.909  -0.490   2.635   0.133  H2   YXP  22  
YXP  H4   H4   H  0  1  N  N  N  -31.312  -11.282  13.543   4.479  -0.610   1.258  H4   YXP  23  
YXP  H5   H5   H  0  1  N  N  N  -30.752  -10.177  14.843   4.282   1.135   0.966  H5   YXP  24  
YXP  H6   H6   H  0  1  N  N  N  -37.297   -9.789  15.424  -2.975   2.921   0.600  H6   YXP  25  
YXP  H7   H7   H  0  1  N  N  N  -39.622   -9.052  15.635  -5.262   2.053   0.372  H7   YXP  26  
YXP  H8   H8   H  0  1  N  N  N  -38.646   -7.019  19.266  -3.715  -1.771  -0.761  H8   YXP  27  
YXP  H9   H9   H  0  1  N  N  N  -42.196   -6.922  18.681  -5.573  -1.900  -1.699  H9   YXP  28  
YXP  H10  H10  H  0  1  N  N  N  -41.055   -8.028  19.517  -5.554  -2.397   0.010  H10  YXP  29  
YXP  H11  H11  H  0  1  N  N  N  -40.571   -6.333  19.172  -7.097  -2.004  -0.786  H11  YXP  30  
YXP  H12  H12  H  0  1  N  N  N  -31.073  -13.699  16.419   6.206  -0.039  -1.926  H12  YXP  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YXP  O2   C8   DOUB  N  N   1  
YXP  C8   S1   SING  N  N   2  
YXP  C8   N1   SING  N  N   3  
YXP  C9   N1   SING  N  N   4  
YXP  C9   C10  SING  N  N   5  
YXP  S1   C7   SING  N  N   6  
YXP  N1   C11  SING  N  N   7  
YXP  O4   C10  DOUB  N  N   8  
YXP  C10  O3   SING  N  N   9  
YXP  C11  C7   SING  N  N  10  
YXP  C11  O5   DOUB  N  N  11  
YXP  C7   C6   DOUB  N  Z  12  
YXP  C12  C13  DOUB  Y  N  13  
YXP  C12  C5   SING  Y  N  14  
YXP  C13  C2   SING  Y  N  15  
YXP  C6   C5   SING  N  N  16  
YXP  C5   C4   DOUB  Y  N  17  
YXP  C2   O1   SING  N  N  18  
YXP  C2   C3   DOUB  Y  N  19  
YXP  O1   C1   SING  N  N  20  
YXP  C4   C3   SING  Y  N  21  
YXP  C4   H1   SING  N  N  22  
YXP  C6   H2   SING  N  N  23  
YXP  C9   H4   SING  N  N  24  
YXP  C9   H5   SING  N  N  25  
YXP  C12  H6   SING  N  N  26  
YXP  C13  H7   SING  N  N  27  
YXP  C3   H8   SING  N  N  28  
YXP  C1   H9   SING  N  N  29  
YXP  C1   H10  SING  N  N  30  
YXP  C1   H11  SING  N  N  31  
YXP  O3   H12  SING  N  N  32  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YXP  SMILES            ACDLabs               12.01  "OC(=O)CN1C(=O)C(=C/c2ccc(OC)cc2)/SC1=O"  
YXP  InChI             InChI                 1.03   "InChI=1S/C13H11NO5S/c1-19-9-4-2-8(3-5-9)6-10-12(17)14(7-11(15)16)13(18)20-10/h2-6H,7H2,1H3,(H,15,16)/b10-6-"  
YXP  InChIKey          InChI                 1.03   VMHLNIJHJPIPKG-POHAHGRESA-N  
YXP  SMILES_CANONICAL  CACTVS                3.385  "COc1ccc(cc1)/C=C/2SC(=O)N(CC(O)=O)C/2=O"  
YXP  SMILES            CACTVS                3.385  "COc1ccc(cc1)C=C2SC(=O)N(CC(O)=O)C2=O"  
YXP  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1ccc(cc1)/C=C\2/C(=O)N(C(=O)S2)CC(=O)O"  
YXP  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1ccc(cc1)C=C2C(=O)N(C(=O)S2)CC(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YXP  "SYSTEMATIC NAME"  ACDLabs               12.01  "{(5Z)-5-[(4-methoxyphenyl)methylidene]-2,4-dioxo-1,3-thiazolidin-3-yl}acetic acid"  
YXP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-[(5~{Z})-5-[(4-methoxyphenyl)methylidene]-2,4-bis(oxidanylidene)-1,3-thiazolidin-3-yl]ethanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YXP  "Create component"  2021-04-06  RCSB  
YXP  "Initial release"   2021-08-04  RCSB  
##
