data_YUP
#

_chem_comp.id                                   YUP
_chem_comp.name                                 "(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-1-(3,5-difluorophenyl)-3-hydroxy-4-[{4-[(1S)-1-hydroxyethyl]benzene-1-sulfonyl}(2-methylpropyl)amino]butan-2-yl}carbamate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H38 F2 N2 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-04-01
_chem_comp.pdbx_modified_date                   2022-04-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       612.682
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YUP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7M9R
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YUP  C13   C1   C  0  1  N  N  R  20.229  -0.562  14.658   -0.238   1.224   0.193  C13   YUP   1  
YUP  C15   C2   C  0  1  N  N  S  19.798  -0.268  16.124    0.867   0.204  -0.088  C15   YUP   2  
YUP  C17   C3   C  0  1  N  N  N  21.718   0.349  17.721    3.291   0.323  -0.300  C17   YUP   3  
YUP  C20   C4   C  0  1  N  N  R  23.322   1.303  19.333    5.655   0.314  -0.627  C20   YUP   4  
YUP  C21   C5   C  0  1  N  N  N  24.821   1.912  19.043    6.032   1.190  -1.842  C21   YUP   5  
YUP  C24   C6   C  0  1  N  N  R  23.441   3.532  19.960    7.847   1.380  -0.433  C24   YUP   6  
YUP  C26   C7   C  0  1  N  N  N  21.111   3.313  19.560    7.839   1.938   1.853  C26   YUP   7  
YUP  C28   C8   C  0  1  N  N  N  18.443   0.412  16.177    0.611  -1.063   0.730  C28   YUP   8  
YUP  C01   C9   C  0  1  Y  N  N  15.512  -6.141  12.917   -7.201  -0.848   0.173  C01   YUP   9  
YUP  C02   C10  C  0  1  Y  N  N  16.580  -6.884  13.711   -6.081  -1.432   0.733  C02   YUP  10  
YUP  C03   C11  C  0  1  Y  N  N  17.530  -6.117  14.645   -4.978  -0.658   1.042  C03   YUP  11  
YUP  C04   C12  C  0  1  Y  N  N  17.386  -4.573  14.764   -4.996   0.701   0.791  C04   YUP  12  
YUP  C05   C13  C  0  1  Y  N  N  16.342  -3.822  13.961   -6.116   1.286   0.231  C05   YUP  13  
YUP  C06   C14  C  0  1  Y  N  N  15.383  -4.598  13.022   -7.218   0.512  -0.079  C06   YUP  14  
YUP  C11   C15  C  0  1  N  N  N  20.438  -3.979  13.956   -2.782   2.740  -1.172  C11   YUP  15  
YUP  C12   C16  C  0  1  N  N  N  19.342  -1.655  14.082   -1.576   0.680  -0.312  C12   YUP  16  
YUP  C23   C17  C  0  1  N  N  S  22.855   2.097  20.286    6.889   0.396   0.293  C23   YUP  17  
YUP  C25   C18  C  0  1  N  N  N  21.361   2.195  20.198    6.514   1.187   1.572  C25   YUP  18  
YUP  C29   C19  C  0  1  Y  N  N  18.167   0.841  17.621    1.628  -2.113   0.361  C29   YUP  19  
YUP  C30   C20  C  0  1  Y  N  N  17.860  -0.212  18.663    1.367  -2.996  -0.669  C30   YUP  20  
YUP  C31   C21  C  0  1  Y  N  N  17.581   0.199  20.117    2.300  -3.961  -1.008  C31   YUP  21  
YUP  C32   C22  C  0  1  Y  N  N  17.616   1.678  20.511    3.496  -4.040  -0.316  C32   YUP  22  
YUP  C33   C23  C  0  1  Y  N  N  17.925   2.735  19.465    3.757  -3.154   0.716  C33   YUP  23  
YUP  C34   C24  C  0  1  Y  N  N  18.203   2.308  18.010    2.824  -2.187   1.050  C34   YUP  24  
YUP  C37   C25  C  0  1  N  N  N  21.986  -3.659  13.970   -3.720   2.228  -2.267  C37   YUP  25  
YUP  C38   C26  C  0  1  N  N  N  22.685  -4.618  12.996   -4.017   3.360  -3.253  C38   YUP  26  
YUP  C39   C27  C  0  1  N  N  N  22.565  -3.831  15.429   -3.053   1.068  -3.008  C39   YUP  27  
YUP  C40   C28  C  0  1  N  N  S  14.606  -6.976  11.997   -8.400  -1.693  -0.170  C40   YUP  28  
YUP  C41   C29  C  0  1  N  N  N  14.324  -8.293  12.628   -9.287  -1.846   1.067  C41   YUP  29  
YUP  F35   F1   F  0  1  N  N  N  17.307  -0.748  21.050    2.044  -4.825  -2.015  F35   YUP  30  
YUP  F36   F2   F  0  1  N  N  N  17.959   4.055  19.805    4.924  -3.230   1.393  F36   YUP  31  
YUP  N10   N1   N  0  1  N  N  N  19.700  -2.965  14.757   -2.612   1.703  -0.151  N10   YUP  32  
YUP  N16   N2   N  0  1  N  N  N  20.735   0.673  16.661    2.164   0.773   0.286  N16   YUP  33  
YUP  O08   O1   O  0  1  N  N  N  17.760  -2.584  16.574   -4.066   3.017   1.348  O08   YUP  34  
YUP  O09   O2   O  0  1  N  N  N  19.088  -4.465  16.913   -2.879   0.988   2.196  O09   YUP  35  
YUP  O14   O3   O  0  1  N  N  N  20.109   0.600  13.925   -0.321   1.461   1.600  O14   YUP  36  
YUP  O18   O4   O  0  1  N  N  N  21.731  -0.705  18.260    3.232  -0.554  -1.138  O18   YUP  37  
YUP  O19   O5   O  0  1  N  N  N  22.617   1.402  18.077    4.483   0.846   0.044  O19   YUP  38  
YUP  O22   O6   O  0  1  N  N  N  24.603   3.247  18.960    7.000   2.129  -1.332  O22   YUP  39  
YUP  O27   O7   O  0  1  N  N  N  22.501   4.180  19.440    8.375   2.266   0.562  O27   YUP  40  
YUP  O42   O8   O  0  1  N  N  N  15.348  -7.111  10.806   -7.965  -2.982  -0.607  O42   YUP  41  
YUP  S07   S1   S  0  1  N  N  N  18.499  -3.624  15.853   -3.590   1.688   1.185  S07   YUP  42  
YUP  H131  H1   H  0  0  N  N  N  21.271  -0.916  14.666   -0.009   2.159  -0.319  H131  YUP  43  
YUP  H151  H2   H  0  0  N  N  N  19.782  -1.202  16.704    0.871  -0.043  -1.150  H151  YUP  44  
YUP  H201  H3   H  0  0  N  N  N  23.425   0.255  19.652    5.480  -0.716  -0.940  H201  YUP  45  
YUP  H211  H4   H  0  0  N  N  N  25.230   1.520  18.100    6.474   0.579  -2.629  H211  YUP  46  
YUP  H212  H5   H  0  0  N  N  N  25.509   1.675  19.868    5.154   1.715  -2.218  H212  YUP  47  
YUP  H241  H6   H  0  0  N  N  N  23.848   3.975  20.881    8.639   0.855  -0.967  H241  YUP  48  
YUP  H261  H7   H  0  0  N  N  N  20.360   3.895  20.115    7.647   2.841   2.433  H261  YUP  49  
YUP  H262  H8   H  0  0  N  N  N  20.729   3.086  18.554    8.536   1.290   2.384  H262  YUP  50  
YUP  H282  H9   H  0  0  N  N  N  18.446   1.296  15.522    0.695  -0.833   1.792  H282  YUP  51  
YUP  H281  H10  H  0  0  N  N  N  17.664  -0.289  15.843   -0.390  -1.437   0.517  H281  YUP  52  
YUP  H021  H11  H  0  0  N  N  N  16.670  -7.956  13.617   -6.067  -2.494   0.930  H021  YUP  53  
YUP  H031  H12  H  0  0  N  N  N  18.286  -6.642  15.210   -4.103  -1.115   1.481  H031  YUP  54  
YUP  H051  H13  H  0  0  N  N  N  16.266  -2.748  14.043   -6.130   2.348   0.035  H051  YUP  55  
YUP  H061  H14  H  0  0  N  N  N  14.635  -4.071  12.448   -8.094   0.969  -0.516  H061  YUP  56  
YUP  H112  H15  H  0  0  N  N  N  20.072  -3.960  12.919   -1.813   2.983  -1.608  H112  YUP  57  
YUP  H111  H16  H  0  0  N  N  N  20.269  -4.977  14.387   -3.209   3.633  -0.715  H111  YUP  58  
YUP  H121  H17  H  0  0  N  N  N  18.285  -1.415  14.272   -1.486   0.416  -1.365  H121  YUP  59  
YUP  H122  H18  H  0  0  N  N  N  19.510  -1.737  12.998   -1.848  -0.206   0.263  H122  YUP  60  
YUP  H231  H19  H  0  0  N  N  N  23.164   1.796  21.298    7.338  -0.577   0.493  H231  YUP  61  
YUP  H251  H20  H  0  0  N  N  N  20.919   2.222  21.205    6.264   0.512   2.391  H251  YUP  62  
YUP  H252  H21  H  0  0  N  N  N  20.953   1.338  19.642    5.700   1.885   1.378  H252  YUP  63  
YUP  H301  H22  H  0  0  N  N  N  17.837  -1.255  18.384    0.434  -2.934  -1.209  H301  YUP  64  
YUP  H321  H23  H  0  0  N  N  N  17.421   1.970  21.532    4.225  -4.792  -0.579  H321  YUP  65  
YUP  H341  H24  H  0  0  N  N  N  18.425   3.056  17.264    3.029  -1.493   1.852  H341  YUP  66  
YUP  H371  H25  H  0  0  N  N  N  22.141  -2.621  13.642   -4.651   1.885  -1.816  H371  YUP  67  
YUP  H381  H26  H  0  0  N  N  N  23.766  -4.412  12.990   -3.086   3.703  -3.704  H381  YUP  68  
YUP  H383  H27  H  0  0  N  N  N  22.511  -5.656  13.316   -4.686   2.995  -4.033  H383  YUP  69  
YUP  H382  H28  H  0  0  N  N  N  22.279  -4.473  11.984   -4.492   4.187  -2.725  H382  YUP  70  
YUP  H392  H29  H  0  0  N  N  N  22.053  -3.137  16.112   -2.963   0.213  -2.339  H392  YUP  71  
YUP  H391  H30  H  0  0  N  N  N  22.403  -4.865  15.768   -3.659   0.791  -3.871  H391  YUP  72  
YUP  H393  H31  H  0  0  N  N  N  23.643  -3.611  15.424   -2.062   1.373  -3.344  H393  YUP  73  
YUP  H401  H32  H  0  0  N  N  N  13.666  -6.433  11.821   -8.968  -1.212  -0.967  H401  YUP  74  
YUP  H412  H33  H  0  0  N  N  N  13.745  -8.141  13.551   -9.619  -0.862   1.400  H412  YUP  75  
YUP  H411  H34  H  0  0  N  N  N  13.746  -8.917  11.931  -10.155  -2.457   0.820  H411  YUP  76  
YUP  H413  H35  H  0  0  N  N  N  15.273  -8.795  12.869   -8.719  -2.326   1.864  H413  YUP  77  
YUP  H161  H36  H  0  0  N  N  N  20.725   1.605  16.299    2.211   1.474   0.955  H161  YUP  78  
YUP  H141  H37  H  0  0  N  N  N  20.669   1.270  14.299   -0.522   0.672   2.121  H141  YUP  79  
YUP  H421  H38  H  0  0  N  N  N  15.508  -6.252  10.433   -7.453  -3.469   0.054  H421  YUP  80  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YUP  O42  C40   SING  N  N   1  
YUP  C40  C41   SING  N  N   2  
YUP  C40  C01   SING  N  N   3  
YUP  C01  C06   DOUB  Y  N   4  
YUP  C01  C02   SING  Y  N   5  
YUP  C38  C37   SING  N  N   6  
YUP  C06  C05   SING  Y  N   7  
YUP  C02  C03   DOUB  Y  N   8  
YUP  O14  C13   SING  N  N   9  
YUP  C11  C37   SING  N  N  10  
YUP  C11  N10   SING  N  N  11  
YUP  C05  C04   DOUB  Y  N  12  
YUP  C37  C39   SING  N  N  13  
YUP  C12  C13   SING  N  N  14  
YUP  C12  N10   SING  N  N  15  
YUP  C03  C04   SING  Y  N  16  
YUP  C13  C15   SING  N  N  17  
YUP  N10  S07   SING  N  N  18  
YUP  C04  S07   SING  N  N  19  
YUP  S07  O08   DOUB  N  N  20  
YUP  S07  O09   DOUB  N  N  21  
YUP  C15  C28   SING  N  N  22  
YUP  C15  N16   SING  N  N  23  
YUP  C28  C29   SING  N  N  24  
YUP  N16  C17   SING  N  N  25  
YUP  C29  C34   DOUB  Y  N  26  
YUP  C29  C30   SING  Y  N  27  
YUP  C17  O19   SING  N  N  28  
YUP  C17  O18   DOUB  N  N  29  
YUP  C34  C33   SING  Y  N  30  
YUP  O19  C20   SING  N  N  31  
YUP  C30  C31   DOUB  Y  N  32  
YUP  O22  C21   SING  N  N  33  
YUP  O22  C24   SING  N  N  34  
YUP  C21  C20   SING  N  N  35  
YUP  C20  C23   SING  N  N  36  
YUP  O27  C26   SING  N  N  37  
YUP  O27  C24   SING  N  N  38  
YUP  C33  F36   SING  N  N  39  
YUP  C33  C32   DOUB  Y  N  40  
YUP  C26  C25   SING  N  N  41  
YUP  C24  C23   SING  N  N  42  
YUP  C31  C32   SING  Y  N  43  
YUP  C31  F35   SING  N  N  44  
YUP  C25  C23   SING  N  N  45  
YUP  C13  H131  SING  N  N  46  
YUP  C15  H151  SING  N  N  47  
YUP  C20  H201  SING  N  N  48  
YUP  C21  H211  SING  N  N  49  
YUP  C21  H212  SING  N  N  50  
YUP  C24  H241  SING  N  N  51  
YUP  C26  H261  SING  N  N  52  
YUP  C26  H262  SING  N  N  53  
YUP  C28  H282  SING  N  N  54  
YUP  C28  H281  SING  N  N  55  
YUP  C02  H021  SING  N  N  56  
YUP  C03  H031  SING  N  N  57  
YUP  C05  H051  SING  N  N  58  
YUP  C06  H061  SING  N  N  59  
YUP  C11  H112  SING  N  N  60  
YUP  C11  H111  SING  N  N  61  
YUP  C12  H121  SING  N  N  62  
YUP  C12  H122  SING  N  N  63  
YUP  C23  H231  SING  N  N  64  
YUP  C25  H251  SING  N  N  65  
YUP  C25  H252  SING  N  N  66  
YUP  C30  H301  SING  N  N  67  
YUP  C32  H321  SING  N  N  68  
YUP  C34  H341  SING  N  N  69  
YUP  C37  H371  SING  N  N  70  
YUP  C38  H381  SING  N  N  71  
YUP  C38  H383  SING  N  N  72  
YUP  C38  H382  SING  N  N  73  
YUP  C39  H392  SING  N  N  74  
YUP  C39  H391  SING  N  N  75  
YUP  C39  H393  SING  N  N  76  
YUP  C40  H401  SING  N  N  77  
YUP  C41  H412  SING  N  N  78  
YUP  C41  H411  SING  N  N  79  
YUP  C41  H413  SING  N  N  80  
YUP  N16  H161  SING  N  N  81  
YUP  O14  H141  SING  N  N  82  
YUP  O42  H421  SING  N  N  83  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YUP  SMILES            ACDLabs               12.01  "CC(O)c1ccc(cc1)S(=O)(=O)N(CC(C)C)CC(O)C(Cc1cc(F)cc(F)c1)NC(=O)OC1COC2OCCC12"  
YUP  InChI             InChI                 1.03   "InChI=1S/C29H38F2N2O8S/c1-17(2)14-33(42(37,38)23-6-4-20(5-7-23)18(3)34)15-26(35)25(12-19-10-21(30)13-22(31)11-19)32-29(36)41-27-16-40-28-24(27)8-9-39-28/h4-7,10-11,13,17-18,24-28,34-35H,8-9,12,14-16H2,1-3H3,(H,32,36)/t18-,24-,25-,26+,27-,28+/m0/s1"  
YUP  InChIKey          InChI                 1.03   YGCDTSFGKDOJLN-UZVQMOOHSA-N  
YUP  SMILES_CANONICAL  CACTVS                3.385  "CC(C)CN(C[C@@H](O)[C@H](Cc1cc(F)cc(F)c1)NC(=O)O[C@H]2CO[C@H]3OCC[C@@H]23)[S](=O)(=O)c4ccc(cc4)[C@H](C)O"  
YUP  SMILES            CACTVS                3.385  "CC(C)CN(C[CH](O)[CH](Cc1cc(F)cc(F)c1)NC(=O)O[CH]2CO[CH]3OCC[CH]23)[S](=O)(=O)c4ccc(cc4)[CH](C)O"  
YUP  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H](c1ccc(cc1)S(=O)(=O)N(C[C@H]([C@H](Cc2cc(cc(c2)F)F)NC(=O)O[C@H]3CO[C@@H]4[C@H]3CCO4)O)CC(C)C)O"  
YUP  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)CN(CC(C(Cc1cc(cc(c1)F)F)NC(=O)OC2COC3C2CCO3)O)S(=O)(=O)c4ccc(cc4)C(C)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YUP  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-1-(3,5-difluorophenyl)-3-hydroxy-4-[{4-[(1S)-1-hydroxyethyl]benzene-1-sulfonyl}(2-methylpropyl)amino]butan-2-yl}carbamate"  
YUP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(3~{a}~{S},4~{R},6~{a}~{R})-2,3,3~{a},4,5,6~{a}-hexahydrofuro[2,3-b]furan-4-yl] ~{N}-[(2~{S},3~{R})-1-[3,5-bis(fluoranyl)phenyl]-4-[2-methylpropyl-[4-[(1~{S})-1-oxidanylethyl]phenyl]sulfonyl-amino]-3-oxidanyl-butan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YUP  "Create component"  2021-04-01  RCSB  
YUP  "Initial release"   2022-04-06  RCSB  
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