data_W9P
#

_chem_comp.id                                   W9P
_chem_comp.name                                 "(1~{S},2~{S},3~{R},4~{S},5~{S})-1-(hydroxymethyl)-5-[6-[[2-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]-4-(1,2,3,4-tetrazol-1-yl)phenyl]amino]hexylamino]cyclohexane-1,2,3,4-tetrol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H31 N7 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-10-04
_chem_comp.pdbx_modified_date                   2021-09-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       481.503
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    W9P
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7K9O
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
W9P  N1   N1   N   0  1  N  N  N  11.085  22.895  13.600    5.026  -0.208  -0.812  N1   W9P   1  
W9P  N3   N2   N   1  1  N  N  N  21.099  24.114  15.115   -5.879  -2.604  -0.087  N3   W9P   2  
W9P  C4   C1   C   0  1  N  N  S   8.667  22.983  13.210    6.672  -1.566   0.390  C4   W9P   3  
W9P  C5   C2   C   0  1  N  N  S  10.006  23.722  13.058    6.231  -1.032  -0.975  C5   W9P   4  
W9P  C6   C3   C   0  1  N  N  N  10.315  24.026  11.577    7.352  -0.182  -1.576  C6   W9P   5  
W9P  C7   C4   C   0  1  N  N  N  10.245  23.257   9.228    8.780   1.842  -1.244  C7   W9P   6  
W9P  C8   C5   C   0  1  N  N  N  12.362  23.613  13.581    3.815  -1.040  -0.817  C8   W9P   7  
W9P  C10  C6   C   0  1  N  N  N  14.933  23.237  13.889    1.322  -1.016  -0.652  C10  W9P   8  
W9P  C13  C7   C   0  1  N  N  N  18.314  22.846  12.454   -2.403  -0.100  -0.315  C13  W9P   9  
W9P  C15  C8   C   0  1  Y  N  N  18.689  25.920  12.860   -4.983   1.049  -0.154  C15  W9P  10  
W9P  C17  C9   C   0  1  Y  N  N  20.498  27.401  13.422   -7.356   0.841   0.115  C17  W9P  11  
W9P  C20  C10  C   0  1  Y  N  N  21.336  29.398  12.138   -8.900   2.758   0.310  C20  W9P  12  
W9P  C1   C11  C   0  1  N  N  S  10.202  22.797  10.670    7.658   0.992  -0.643  C1   W9P  13  
W9P  C11  C12  C   0  1  N  N  N  16.089  22.189  13.697    0.090  -0.125  -0.481  C11  W9P  14  
W9P  C12  C13  C   0  1  N  N  N  16.847  22.317  12.344   -1.171  -0.991  -0.487  C12  W9P  15  
W9P  C14  C14  C   0  1  Y  N  N  19.257  24.910  13.626   -4.867  -0.336  -0.178  C14  W9P  16  
W9P  C16  C15  C   0  1  Y  N  N  19.303  27.167  12.759   -6.223   1.635  -0.008  C16  W9P  17  
W9P  C18  C16  C   0  1  Y  N  N  21.077  26.395  14.189   -7.243  -0.542   0.079  C18  W9P  18  
W9P  C19  C17  C   0  1  Y  N  N  20.462  25.141  14.297   -6.001  -1.129  -0.061  C19  W9P  19  
W9P  C2   C18  C   0  1  N  N  S   8.919  21.987  10.896    8.099   0.458   0.721  C2   W9P  20  
W9P  C3   C19  C   0  1  N  N  R   8.681  21.697  12.389    6.977  -0.392   1.322  C3   W9P  21  
W9P  C9   C20  C   0  1  N  N  N  13.543  22.592  13.671    2.583  -0.149  -0.646  C9   W9P  22  
W9P  N2   N3   N   0  1  N  N  N  18.556  23.603  13.697   -3.610  -0.930  -0.321  N2   W9P  23  
W9P  N4   N4   N   0  1  Y  N  N  21.130  28.719  13.303   -8.618   1.438   0.258  N4   W9P  24  
W9P  N5   N5   N   0  1  Y  N  N  21.590  29.469  14.315   -9.861   0.790   0.377  N5   W9P  25  
W9P  N6   N6   N   0  1  Y  N  N  22.080  30.589  13.818  -10.751   1.716   0.487  N6   W9P  26  
W9P  N7   N7   N   0  1  Y  N  N  21.936  30.575  12.485  -10.196   2.873   0.448  N7   W9P  27  
W9P  O1   O1   O   0  1  N  N  N   9.060  20.751  10.241    8.385   1.554   1.592  O1   W9P  28  
W9P  O2   O2   O   0  1  N  N  N   7.484  20.975  12.571    7.389  -0.891   2.597  O2   W9P  29  
W9P  O3   O3   O   0  1  N  N  N   8.412  22.685  14.563    5.624  -2.360   0.951  O3   W9P  30  
W9P  O4   O4   O   0  1  N  N  N   9.330  24.302   9.061    9.145   2.870  -0.321  O4   W9P  31  
W9P  O5   O5   O   0  1  N  N  N  11.309  21.949  10.912    6.486   1.793  -0.485  O5   W9P  32  
W9P  O6   O6   O   0  1  N  N  N  21.894  24.492  16.207   -6.727  -3.276  -0.646  O6   W9P  33  
W9P  O7   O7   O  -1  1  N  N  N  20.938  22.748  14.832   -4.930  -3.146   0.450  O7   W9P  34  
W9P  H1   H1   H   0  1  N  N  N  10.864  22.647  14.543    5.078   0.348   0.028  H1   W9P  35  
W9P  H3   H3   H   0  1  N  N  N   7.872  23.633  12.816    7.566  -2.177   0.269  H3   W9P  36  
W9P  H4   H4   H   0  1  N  N  N   9.952  24.672  13.610    6.013  -1.868  -1.639  H4   W9P  37  
W9P  H5   H5   H   0  1  N  N  N  11.340  24.418  11.508    8.247  -0.793  -1.696  H5   W9P  38  
W9P  H6   H6   H   0  1  N  N  N   9.606  24.788  11.222    7.038   0.199  -2.548  H6   W9P  39  
W9P  H7   H7   H   0  1  N  N  N   9.977  22.421   8.565    9.645   1.211  -1.447  H7   W9P  40  
W9P  H8   H8   H   0  1  N  N  N  11.258  23.609   8.982    8.434   2.295  -2.173  H8   W9P  41  
W9P  H9   H9   H   0  1  N  N  N  12.445  24.186  12.646    3.747  -1.576  -1.764  H9   W9P  42  
W9P  H10  H10  H   0  1  N  N  N  12.407  24.301  14.438    3.862  -1.756   0.003  H10  W9P  43  
W9P  H11  H11  H   0  1  N  N  N  15.066  24.053  13.164    1.370  -1.732   0.169  H11  W9P  44  
W9P  H12  H12  H   0  1  N  N  N  14.983  23.642  14.911    1.254  -1.552  -1.599  H12  W9P  45  
W9P  H13  H13  H   0  1  N  N  N  19.001  21.987  12.426   -2.335   0.436   0.631  H13  W9P  46  
W9P  H14  H14  H   0  1  N  N  N  18.516  23.505  11.596   -2.450   0.616  -1.136  H14  W9P  47  
W9P  H15  H15  H   0  1  N  N  N  17.762  25.737  12.337   -4.101   1.666  -0.245  H15  W9P  48  
W9P  H16  H16  H   0  1  N  N  N  21.077  29.071  11.142   -8.188   3.568   0.253  H16  W9P  49  
W9P  H17  H17  H   0  1  N  N  N  15.654  21.180  13.755    0.158   0.412   0.465  H17  W9P  50  
W9P  H18  H18  H   0  1  N  N  N  16.815  22.322  14.513    0.043   0.591  -1.302  H18  W9P  51  
W9P  H19  H19  H   0  1  N  N  N  16.283  23.008  11.701   -1.123  -1.707   0.334  H19  W9P  52  
W9P  H20  H20  H   0  1  N  N  N  16.878  21.322  11.875   -1.239  -1.528  -1.433  H20  W9P  53  
W9P  H21  H21  H   0  1  N  N  N  18.850  27.948  12.167   -6.313   2.711   0.011  H21  W9P  54  
W9P  H22  H22  H   0  1  N  N  N  22.007  26.582  14.705   -8.124  -1.158   0.175  H22  W9P  55  
W9P  H23  H23  H   0  1  N  N  N   8.062  22.549  10.497    8.993  -0.153   0.601  H23  W9P  56  
W9P  H24  H24  H   0  1  N  N  N   9.525  21.087  12.743    6.083   0.219   1.443  H24  W9P  57  
W9P  H25  H25  H   0  1  N  N  N  13.345  21.910  14.511    2.651   0.387   0.300  H25  W9P  58  
W9P  H26  H26  H   0  1  N  N  N  13.574  22.018  12.733    2.536   0.567  -1.467  H26  W9P  59  
W9P  H27  H27  H   0  1  N  N  N  17.663  23.773  14.114   -3.537  -1.892  -0.423  H27  W9P  60  
W9P  H28  H28  H   0  1  N  N  N   8.274  20.233  10.369    8.670   1.289   2.477  H28  W9P  61  
W9P  H29  H29  H   0  1  N  N  N   7.354  20.805  13.497    6.726  -1.440   3.037  H29  W9P  62  
W9P  H30  H30  H   0  1  N  N  N   8.404  23.489  15.069    5.835  -2.732   1.818  H30  W9P  63  
W9P  H31  H31  H   0  1  N  N  N   9.349  24.599   8.159    9.853   3.448  -0.636  H31  W9P  64  
W9P  H32  H32  H   0  1  N  N  N  11.291  21.654  11.815    6.607   2.557   0.095  H32  W9P  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
W9P  O4   C7   SING  N  N   1  
W9P  C7   C1   SING  N  N   2  
W9P  O1   C2   SING  N  N   3  
W9P  C1   C2   SING  N  N   4  
W9P  C1   O5   SING  N  N   5  
W9P  C1   C6   SING  N  N   6  
W9P  C2   C3   SING  N  N   7  
W9P  C6   C5   SING  N  N   8  
W9P  C20  N7   DOUB  Y  N   9  
W9P  C20  N4   SING  Y  N  10  
W9P  C12  C13  SING  N  N  11  
W9P  C12  C11  SING  N  N  12  
W9P  C3   O2   SING  N  N  13  
W9P  C3   C4   SING  N  N  14  
W9P  C13  N2   SING  N  N  15  
W9P  N7   N6   SING  Y  N  16  
W9P  C16  C15  DOUB  Y  N  17  
W9P  C16  C17  SING  Y  N  18  
W9P  C15  C14  SING  Y  N  19  
W9P  C5   C4   SING  N  N  20  
W9P  C5   N1   SING  N  N  21  
W9P  C4   O3   SING  N  N  22  
W9P  N4   C17  SING  N  N  23  
W9P  N4   N5   SING  Y  N  24  
W9P  C17  C18  DOUB  Y  N  25  
W9P  C8   N1   SING  N  N  26  
W9P  C8   C9   SING  N  N  27  
W9P  C14  N2   SING  N  N  28  
W9P  C14  C19  DOUB  Y  N  29  
W9P  C9   C10  SING  N  N  30  
W9P  C11  C10  SING  N  N  31  
W9P  N6   N5   DOUB  Y  N  32  
W9P  C18  C19  SING  Y  N  33  
W9P  C19  N3   SING  N  N  34  
W9P  O7   N3   SING  N  N  35  
W9P  N3   O6   DOUB  N  N  36  
W9P  N1   H1   SING  N  N  37  
W9P  C4   H3   SING  N  N  38  
W9P  C5   H4   SING  N  N  39  
W9P  C6   H5   SING  N  N  40  
W9P  C6   H6   SING  N  N  41  
W9P  C7   H7   SING  N  N  42  
W9P  C7   H8   SING  N  N  43  
W9P  C8   H9   SING  N  N  44  
W9P  C8   H10  SING  N  N  45  
W9P  C10  H11  SING  N  N  46  
W9P  C10  H12  SING  N  N  47  
W9P  C13  H13  SING  N  N  48  
W9P  C13  H14  SING  N  N  49  
W9P  C15  H15  SING  N  N  50  
W9P  C20  H16  SING  N  N  51  
W9P  C11  H17  SING  N  N  52  
W9P  C11  H18  SING  N  N  53  
W9P  C12  H19  SING  N  N  54  
W9P  C12  H20  SING  N  N  55  
W9P  C16  H21  SING  N  N  56  
W9P  C18  H22  SING  N  N  57  
W9P  C2   H23  SING  N  N  58  
W9P  C3   H24  SING  N  N  59  
W9P  C9   H25  SING  N  N  60  
W9P  C9   H26  SING  N  N  61  
W9P  N2   H27  SING  N  N  62  
W9P  O1   H28  SING  N  N  63  
W9P  O2   H29  SING  N  N  64  
W9P  O3   H30  SING  N  N  65  
W9P  O4   H31  SING  N  N  66  
W9P  O5   H32  SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
W9P  SMILES            ACDLabs               12.01  "N(C1C(O)C(C(C(C1)(CO)O)O)O)CCCCCCNc2ccc(cc2[N+](=O)[O-])n3cnnn3"  
W9P  InChI             InChI                 1.03   "InChI=1S/C20H31N7O7/c28-11-20(32)10-15(17(29)18(30)19(20)31)22-8-4-2-1-3-7-21-14-6-5-13(9-16(14)27(33)34)26-12-23-24-25-26/h5-6,9,12,15,17-19,21-22,28-32H,1-4,7-8,10-11H2/t15-,17-,18+,19-,20-/m0/s1"  
W9P  InChIKey          InChI                 1.03   AEVYKERIFGNKMO-UVBQOVKKSA-N  
W9P  SMILES_CANONICAL  CACTVS                3.385  "OC[C@@]1(O)C[C@H](NCCCCCCNc2ccc(cc2[N+]([O-])=O)n3cnnn3)[C@H](O)[C@@H](O)[C@@H]1O"  
W9P  SMILES            CACTVS                3.385  "OC[C]1(O)C[CH](NCCCCCCNc2ccc(cc2[N+]([O-])=O)n3cnnn3)[CH](O)[CH](O)[CH]1O"  
W9P  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1n2cnnn2)[N+](=O)[O-])NCCCCCCN[C@H]3C[C@@]([C@H]([C@@H]([C@H]3O)O)O)(CO)O"  
W9P  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1n2cnnn2)[N+](=O)[O-])NCCCCCCNC3CC(C(C(C3O)O)O)(CO)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
W9P  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-[(6-{[2-nitro-4-(1H-tetrazol-1-yl)phenyl]amino}hexyl)amino]cyclohexane-1,2,3,4-tetrol"  
W9P  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(1~{S},2~{S},3~{R},4~{S},5~{S})-1-(hydroxymethyl)-5-[6-[[2-nitro-4-(1,2,3,4-tetrazol-1-yl)phenyl]amino]hexylamino]cyclohexane-1,2,3,4-tetrol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
W9P  "Create component"  2020-10-04  RCSB  
W9P  "Initial release"   2021-09-29  RCSB  
##
