data_UEP
# 
_chem_comp.id                                    UEP 
_chem_comp.name                                  
;6-ethyluridine 5'-phosphate
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H17 N2 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         6-ethyl-UMP 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-10-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        352.234 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UEP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3EWU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UEP O3P    O3P    O 0 1 N N N N N N 25.940 -11.289 15.190 4.341  -2.045 0.699  O3P    UEP 1  
UEP P      P      P 0 1 N N N N N N 25.333 -10.461 14.048 4.525  -0.812 -0.319 P      UEP 2  
UEP O1P    O1P    O 0 1 N N N N N N 26.391 -10.148 13.014 5.504  0.147  0.240  O1P    UEP 3  
UEP O2P    O2P    O 0 1 N N N N N N 24.045 -11.008 13.479 5.060  -1.360 -1.735 O2P    UEP 4  
UEP "O5'"  "O5'"  O 0 1 N N N N N N 25.049 -9.075  14.830 3.110  -0.073 -0.529 "O5'"  UEP 5  
UEP "C5'"  "C5'"  C 0 1 N N N N N N 24.188 -8.064  14.301 2.427  0.612  0.522  "C5'"  UEP 6  
UEP "C4'"  "C4'"  C 0 1 N N R N N N 24.252 -6.879  15.238 1.119  1.197  -0.016 "C4'"  UEP 7  
UEP "C3'"  "C3'"  C 0 1 N N S N N N 23.392 -7.231  16.424 0.424  2.048  1.069  "C3'"  UEP 8  
UEP "O3'"  "O3'"  O 0 1 N N N N N N 23.990 -6.568  17.598 0.703  3.436  0.873  "O3'"  UEP 9  
UEP "C2'"  "C2'"  C 0 1 N N R N N N 22.052 -6.566  16.075 -1.081 1.764  0.862  "C2'"  UEP 10 
UEP "O2'"  "O2'"  O 0 1 N N N N N N 21.446 -6.185  17.327 -1.777 2.968  0.531  "O2'"  UEP 11 
UEP "O4'"  "O4'"  O 0 1 N N N N N N 23.666 -5.758  14.544 0.181  0.140  -0.314 "O4'"  UEP 12 
UEP "C1'"  "C1'"  C 0 1 N N R N N N 22.450 -5.384  15.129 -1.116 0.775  -0.324 "C1'"  UEP 13 
UEP N1     N1     N 0 1 N N N N N N 21.422 -5.089  14.107 -2.173 -0.221 -0.126 N1     UEP 14 
UEP C7     C7     C 0 1 N N N N N N 21.240 -2.859  14.930 -3.255 0.631  -2.205 C7     UEP 15 
UEP C8     C8     C 0 1 N N N N N N 22.662 -2.236  14.392 -3.912 1.949  -1.789 C8     UEP 16 
UEP C6     C6     C 0 1 N N N N N N 20.833 -3.886  14.065 -3.205 -0.301 -1.021 C6     UEP 17 
UEP C5     C5     C 0 1 N N N N N N 19.815 -3.627  13.140 -4.178 -1.218 -0.839 C5     UEP 18 
UEP C4     C4     C 0 1 N N N N N N 19.424 -4.678  12.328 -4.109 -2.083 0.280  C4     UEP 19 
UEP O4     O4     O 0 1 N N N N N N 18.558 -4.472  11.432 -4.975 -2.919 0.465  O4     UEP 20 
UEP N3     N3     N 0 1 N N N N N N 20.058 -5.858  12.333 -3.076 -1.972 1.139  N3     UEP 21 
UEP C2     C2     C 0 1 N N N N N N 21.016 -6.121  13.232 -2.116 -1.051 0.930  C2     UEP 22 
UEP O2     O2     O 0 1 N N N N N N 21.569 -7.226  13.248 -1.190 -0.963 1.713  O2     UEP 23 
UEP HO3P   HO3P   H 0 0 N N N N N N 26.065 -12.185 14.900 3.711  -2.714 0.396  HO3P   UEP 24 
UEP HO2P   HO2P   H 0 0 N N N N N N 23.413 -11.123 14.179 5.910  -1.818 -1.684 HO2P   UEP 25 
UEP "H5'"  "H5'"  H 0 1 N N N N N N 24.522 -7.770  13.295 2.207  -0.087 1.329  "H5'"  UEP 26 
UEP "H5'A" "H5'A" H 0 0 N N N N N N 23.157 -8.438  14.219 3.056  1.418  0.900  "H5'A" UEP 27 
UEP "H4'"  "H4'"  H 0 1 N N N N N N 25.278 -6.637  15.554 1.311  1.798  -0.905 "H4'"  UEP 28 
UEP "H3'"  "H3'"  H 0 1 N N N N N N 23.292 -8.306  16.634 0.741  1.733  2.063  "H3'"  UEP 29 
UEP "HO3'" "HO3'" H 0 0 N Y N N N N 24.119 -7.205  18.291 0.290  4.016  1.527  "HO3'" UEP 30 
UEP "H2'"  "H2'"  H 0 1 N N N N N N 21.306 -7.186  15.556 -1.510 1.309  1.755  "H2'"  UEP 31 
UEP "HO2'" "HO2'" H 0 0 N N N N N N 22.119 -6.101  17.992 -1.735 3.647  1.218  "HO2'" UEP 32 
UEP "H1'"  "H1'"  H 0 1 N N N N N N 22.542 -4.449  15.702 -1.269 1.311  -1.261 "H1'"  UEP 33 
UEP H7     H7     H 0 1 N N N N N N 20.475 -2.069  14.950 -3.835 0.172  -3.005 H7     UEP 34 
UEP H7A    H7A    H 0 1 N N N N N N 21.372 -3.260  15.946 -2.241 0.826  -2.556 H7A    UEP 35 
UEP H8     H8     H 0 1 N N N N N N 22.613 -2.097  13.302 -3.948 2.623  -2.645 H8     UEP 36 
UEP H8A    H8A    H 0 1 N N N N N N 22.844 -1.266  14.878 -4.925 1.754  -1.437 H8A    UEP 37 
UEP H8B    H8B    H 0 1 N N N N N N 23.481 -2.928  14.636 -3.332 2.408  -0.989 H8B    UEP 38 
UEP H5     H5     H 0 1 N N N N N N 19.356 -2.653  13.063 -4.998 -1.292 -1.538 H5     UEP 39 
UEP HN3    HN3    H 0 1 N N N N N N 19.813 -6.552  11.656 -3.021 -2.561 1.908  HN3    UEP 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UEP P     O3P    SING N N 1  
UEP O3P   HO3P   SING N N 2  
UEP O1P   P      DOUB N N 3  
UEP O2P   P      SING N N 4  
UEP P     "O5'"  SING N N 5  
UEP O2P   HO2P   SING N N 6  
UEP "C5'" "O5'"  SING N N 7  
UEP "C5'" "C4'"  SING N N 8  
UEP "C5'" "H5'"  SING N N 9  
UEP "C5'" "H5'A" SING N N 10 
UEP "O4'" "C4'"  SING N N 11 
UEP "C4'" "C3'"  SING N N 12 
UEP "C4'" "H4'"  SING N N 13 
UEP "C2'" "C3'"  SING N N 14 
UEP "C3'" "O3'"  SING N N 15 
UEP "C3'" "H3'"  SING N N 16 
UEP "O3'" "HO3'" SING N N 17 
UEP "C1'" "C2'"  SING N N 18 
UEP "C2'" "O2'"  SING N N 19 
UEP "C2'" "H2'"  SING N N 20 
UEP "O2'" "HO2'" SING N N 21 
UEP "O4'" "C1'"  SING N N 22 
UEP N1    "C1'"  SING N N 23 
UEP "C1'" "H1'"  SING N N 24 
UEP C2    N1     SING N N 25 
UEP C6    N1     SING N N 26 
UEP C6    C7     SING N N 27 
UEP C8    C7     SING N N 28 
UEP C7    H7     SING N N 29 
UEP C7    H7A    SING N N 30 
UEP C8    H8     SING N N 31 
UEP C8    H8A    SING N N 32 
UEP C8    H8B    SING N N 33 
UEP C5    C6     DOUB N N 34 
UEP C4    C5     SING N N 35 
UEP C5    H5     SING N N 36 
UEP O4    C4     DOUB N N 37 
UEP C4    N3     SING N N 38 
UEP N3    C2     SING N N 39 
UEP N3    HN3    SING N N 40 
UEP C2    O2     DOUB N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UEP SMILES           ACDLabs              10.04 "O=C1NC(=O)N(C(=C1)CC)C2OC(C(O)C2O)COP(=O)(O)O"                                                                                                                   
UEP SMILES_CANONICAL CACTVS               3.341 "CCC1=CC(=O)NC(=O)N1[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O"                                                                                                 
UEP SMILES           CACTVS               3.341 "CCC1=CC(=O)NC(=O)N1[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O"                                                                                                       
UEP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCC1=CC(=O)NC(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O"                                                                                                 
UEP SMILES           "OpenEye OEToolkits" 1.5.0 "CCC1=CC(=O)NC(=O)N1C2C(C(C(O2)COP(=O)(O)O)O)O"                                                                                                                   
UEP InChI            InChI                1.03  "InChI=1S/C11H17N2O9P/c1-2-5-3-7(14)12-11(17)13(5)10-9(16)8(15)6(22-10)4-21-23(18,19)20/h3,6,8-10,15-16H,2,4H2,1H3,(H,12,14,17)(H2,18,19,20)/t6-,8-,9-,10-/m1/s1" 
UEP InChIKey         InChI                1.03  SVESMKHPINYNGL-PEBGCTIMSA-N                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UEP "SYSTEMATIC NAME" ACDLabs              10.04 
;6-ethyluridine 5'-(dihydrogen phosphate)
;
UEP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(6-ethyl-2,4-dioxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UEP "Create component"  2008-10-23 RCSB 
UEP "Modify descriptor" 2011-06-04 RCSB 
UEP "Modify synonyms"   2021-03-01 PDBE 
UEP "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      UEP 
_pdbx_chem_comp_synonyms.name         6-ethyl-UMP 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            UEP 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C7 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
