data_U3P
# 
_chem_comp.id                                    U3P 
_chem_comp.name                                  "3'-URIDINEMONOPHOSPHATE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H13 N2 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        324.181 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     U3P 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4RSK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
U3P N1     N1   N 0 1 N N N -17.478 40.551 26.994 -0.192 0.501  -2.238 N1     U3P 1  
U3P C2     C2   C 0 1 N N N -16.466 39.667 27.305 0.193  -0.702 -2.698 C2     U3P 2  
U3P N3     N3   N 0 1 N N N -16.488 38.479 26.618 0.002  -1.044 -3.986 N3     U3P 3  
U3P C4     C4   C 0 1 N N N -17.388 38.109 25.633 -0.572 -0.175 -4.842 C4     U3P 4  
U3P C5     C5   C 0 1 N N N -18.428 39.083 25.380 -0.978 1.097  -4.371 C5     U3P 5  
U3P C6     C6   C 0 1 N N N -18.440 40.246 26.059 -0.779 1.411  -3.074 C6     U3P 6  
U3P O2     O2   O 0 1 N N N -15.616 39.894 28.138 0.712  -1.496 -1.938 O2     U3P 7  
U3P O4     O4   O 0 1 N N N -17.260 37.022 25.057 -0.741 -0.481 -6.008 O4     U3P 8  
U3P P      P    P 0 1 N N N -15.883 45.662 25.882 -0.739 -0.117 3.654  P      U3P 9  
U3P O1P    O1P  O 0 1 N N N -15.657 44.948 24.601 -1.508 0.765  4.759  O1P    U3P 10 
U3P O2P    O2P  O 0 1 N N N -14.821 45.280 26.837 0.558  -0.570 4.200  O2P    U3P 11 
U3P O3P    O3P  O 0 1 N N N -16.066 47.129 25.742 -1.636 -1.398 3.271  O3P    U3P 12 
U3P "O5'"  O5*  O 0 1 N N N -21.453 43.444 26.672 3.906  0.322  0.846  "O5'"  U3P 13 
U3P "C5'"  C5*  C 0 1 N N N -20.182 43.731 26.089 2.696  -0.294 1.289  "C5'"  U3P 14 
U3P "C4'"  C4*  C 0 1 N N R -19.013 43.595 27.075 1.506  0.598  0.931  "C4'"  U3P 15 
U3P "O4'"  O4*  O 0 1 N N N -18.956 42.255 27.655 1.425  0.755  -0.495 "O4'"  U3P 16 
U3P "C3'"  C3*  C 0 1 N N S -17.648 43.780 26.407 0.195  -0.062 1.398  "C3'"  U3P 17 
U3P "O3'"  O3*  O 0 1 N N N -17.288 45.161 26.459 -0.486 0.772  2.336  "O3'"  U3P 18 
U3P "C2'"  C2*  C 0 1 N N R -16.695 42.920 27.249 -0.636 -0.208 0.097  "C2'"  U3P 19 
U3P "O2'"  O2*  O 0 1 N N N -16.211 43.596 28.406 -2.009 0.108  0.332  "O2'"  U3P 20 
U3P "C1'"  C1*  C 0 1 N N R -17.608 41.807 27.731 0.023  0.842  -0.830 "C1'"  U3P 21 
U3P HN3    HN3  H 0 1 N N N -15.763 37.804 26.863 0.282  -1.917 -4.301 HN3    U3P 22 
U3P H5     H5   H 0 1 N N N -19.237 38.934 24.645 -1.441 1.806  -5.042 H5     U3P 23 
U3P H6     H6   H 0 1 N N N -19.252 40.961 25.845 -1.083 2.377  -2.697 H6     U3P 24 
U3P HOP1   1HOP H 0 0 N N N -16.339 45.193 23.987 -1.640 0.196  5.529  HOP1   U3P 25 
U3P HOP3   3HOP H 0 0 N N N -16.210 47.586 26.562 -2.471 -1.060 2.920  HOP3   U3P 26 
U3P "HO5'" *HO5 H 0 0 N N N -22.176 43.528 26.061 4.628  -0.271 1.091  "HO5'" U3P 27 
U3P "H5'1" 1H5* H 0 0 N N N -20.011 43.101 25.184 2.582  -1.263 0.802  "H5'1" U3P 28 
U3P "H5'2" 2H5* H 0 0 N N N -20.183 44.740 25.614 2.733  -0.433 2.370  "H5'2" U3P 29 
U3P "H4'"  H4*  H 0 1 N N N -19.202 44.386 27.837 1.619  1.573  1.405  "H4'"  U3P 30 
U3P "H3'"  H3*  H 0 1 N N N -17.628 43.479 25.333 0.396  -1.040 1.835  "H3'"  U3P 31 
U3P "H2'"  H2*  H 0 1 N N N -15.799 42.614 26.659 -0.536 -1.211 -0.318 "H2'"  U3P 32 
U3P "HO2'" *HO2 H 0 0 N N N -15.621 43.063 28.927 -2.452 0.090  -0.526 "HO2'" U3P 33 
U3P "H1'"  H1*  H 0 1 N N N -17.300 41.580 28.778 -0.360 1.839  -0.614 "H1'"  U3P 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
U3P N1    C2     SING N N 1  
U3P N1    C6     SING N N 2  
U3P N1    "C1'"  SING N N 3  
U3P C2    N3     SING N N 4  
U3P C2    O2     DOUB N N 5  
U3P N3    C4     SING N N 6  
U3P N3    HN3    SING N N 7  
U3P C4    C5     SING N N 8  
U3P C4    O4     DOUB N N 9  
U3P C5    C6     DOUB N N 10 
U3P C5    H5     SING N N 11 
U3P C6    H6     SING N N 12 
U3P P     O1P    SING N N 13 
U3P P     O2P    DOUB N N 14 
U3P P     O3P    SING N N 15 
U3P P     "O3'"  SING N N 16 
U3P O1P   HOP1   SING N N 17 
U3P O3P   HOP3   SING N N 18 
U3P "O5'" "C5'"  SING N N 19 
U3P "O5'" "HO5'" SING N N 20 
U3P "C5'" "C4'"  SING N N 21 
U3P "C5'" "H5'1" SING N N 22 
U3P "C5'" "H5'2" SING N N 23 
U3P "C4'" "O4'"  SING N N 24 
U3P "C4'" "C3'"  SING N N 25 
U3P "C4'" "H4'"  SING N N 26 
U3P "O4'" "C1'"  SING N N 27 
U3P "C3'" "O3'"  SING N N 28 
U3P "C3'" "C2'"  SING N N 29 
U3P "C3'" "H3'"  SING N N 30 
U3P "C2'" "O2'"  SING N N 31 
U3P "C2'" "C1'"  SING N N 32 
U3P "C2'" "H2'"  SING N N 33 
U3P "O2'" "HO2'" SING N N 34 
U3P "C1'" "H1'"  SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
U3P SMILES           ACDLabs              10.04 "O=C1NC(=O)N(C=C1)C2OC(C(OP(=O)(O)O)C2O)CO"                                                                                                          
U3P SMILES_CANONICAL CACTVS               3.341 "OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)N2C=CC(=O)NC2=O"                                                                                         
U3P SMILES           CACTVS               3.341 "OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)N2C=CC(=O)NC2=O"                                                                                              
U3P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)OP(=O)(O)O)O"                                                                                      
U3P SMILES           "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)NC1=O)C2C(C(C(O2)CO)OP(=O)(O)O)O"                                                                                                        
U3P InChI            InChI                1.03  "InChI=1S/C9H13N2O9P/c12-3-4-7(20-21(16,17)18)6(14)8(19-4)11-2-1-5(13)10-9(11)15/h1-2,4,6-8,12,14H,3H2,(H,10,13,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1" 
U3P InChIKey         InChI                1.03  FOGRQMPFHUHIGU-XVFCMESISA-N                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
U3P "SYSTEMATIC NAME" ACDLabs              10.04 
;3'-uridylic acid
;
U3P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
U3P "Create component"  1999-07-08 RCSB 
U3P "Modify descriptor" 2011-06-04 RCSB 
# 
