data_Q7P
# 
_chem_comp.id                                    Q7P 
_chem_comp.name                                  "6-[(4-hydroxybutyl)amino]-5-[(E)-(2-oxopropylidene)amino]pyrimidine-2,4(1H,3H)-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H16 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-10-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        268.269 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Q7P 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6PUI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Q7P C9  C1  C 0 1 N N N N N N -43.744 41.834 189.013 -0.927 -3.021 -0.111 C9  Q7P 1  
Q7P C10 C2  C 0 1 N N N N N N -45.559 40.655 190.189 -2.531 -1.338 0.174  C10 Q7P 2  
Q7P N   N1  N 0 1 N N N N N N -45.283 38.105 190.180 -1.711 0.960  0.383  N   Q7P 3  
Q7P C   C3  C 0 1 N N N N N N -45.964 35.464 190.414 -4.051 3.544  -0.938 C   Q7P 4  
Q7P C1  C4  C 0 1 N N N N N N -46.758 36.486 191.164 -2.989 2.880  -0.100 C1  Q7P 5  
Q7P C2  C5  C 0 1 N N N N N N -46.364 37.904 190.845 -2.634 1.538  -0.346 C2  Q7P 6  
Q7P C3  C6  C 0 1 N N N N N N -44.882 39.401 189.860 -1.447 -0.346 0.221  C3  Q7P 7  
Q7P C4  C7  C 0 1 N N N N N N -43.681 39.420 189.132 -0.125 -0.810 0.091  C4  Q7P 8  
Q7P C5  C8  C 0 1 N N N N N N -41.978 38.100 187.824 2.293  -0.436 -0.009 C5  Q7P 9  
Q7P C6  C9  C 0 1 N N N N N N -40.628 38.061 188.502 3.270  0.739  0.066  C6  Q7P 10 
Q7P C7  C10 C 0 1 N N N N N N -39.579 38.817 187.718 4.702  0.221  -0.076 C7  Q7P 11 
Q7P C8  C11 C 0 1 N N N N N N -39.878 40.265 187.492 5.680  1.395  -0.001 C8  Q7P 12 
Q7P N1  N2  N 0 1 N N N N N N -43.054 38.219 188.797 0.921  0.061  0.128  N1  Q7P 13 
Q7P N2  N3  N 0 1 N N N N N N -43.164 40.621 188.745 0.092  -2.149 -0.073 N2  Q7P 14 
Q7P N3  N4  N 0 1 N N N N N N -44.913 41.787 189.723 -2.209 -2.638 0.009  N3  Q7P 15 
Q7P O1  O1  O 0 1 N N N N N N -38.538 40.764 187.417 7.018  0.911  -0.134 O1  Q7P 16 
Q7P O2  O2  O 0 1 N N N N N N -43.256 42.899 188.628 -0.682 -4.202 -0.263 O2  Q7P 17 
Q7P O3  O3  O 0 1 N N N N N N -46.608 40.775 190.815 -3.694 -0.995 0.281  O3  Q7P 18 
Q7P H1  H1  H 0 1 N N N N N N -46.447 34.481 190.510 -3.587 4.017  -1.804 H1  Q7P 19 
Q7P H2  H2  H 0 1 N N N N N N -45.914 35.746 189.352 -4.769 2.797  -1.273 H2  Q7P 20 
Q7P H3  H3  H 0 1 N N N N N N -44.946 35.414 190.828 -4.563 4.300  -0.343 H3  Q7P 21 
Q7P H6  H6  H 0 1 N N N N N N -46.976 38.733 191.168 -3.122 0.986  -1.135 H6  Q7P 22 
Q7P H8  H8  H 0 1 N N N N N N -42.013 38.964 187.144 2.403  -0.939 -0.969 H8  Q7P 23 
Q7P H9  H9  H 0 1 N N N N N N -42.117 37.173 187.248 2.507  -1.138 0.797  H9  Q7P 24 
Q7P H10 H10 H 0 1 N N N N N N -40.310 37.013 188.601 3.056  1.442  -0.739 H10 Q7P 25 
Q7P H11 H11 H 0 1 N N N N N N -40.719 38.513 189.501 3.160  1.243  1.027  H11 Q7P 26 
Q7P H12 H12 H 0 1 N N N N N N -39.473 38.333 186.736 4.916  -0.482 0.729  H12 Q7P 27 
Q7P H13 H13 H 0 1 N N N N N N -38.628 38.747 188.266 4.813  -0.283 -1.036 H13 Q7P 28 
Q7P H14 H14 H 0 1 N N N N N N -40.436 40.706 188.331 5.466  2.098  -0.806 H14 Q7P 29 
Q7P H15 H15 H 0 1 N N N N N N -40.432 40.430 186.556 5.570  1.899  0.959  H15 Q7P 30 
Q7P H16 H16 H 0 1 N N N N N N -43.782 37.617 188.469 0.758  1.010  0.244  H16 Q7P 31 
Q7P H17 H17 H 0 1 N N N N N N -45.347 42.665 189.927 -2.913 -3.305 -0.025 H17 Q7P 32 
Q7P H18 H18 H 0 1 N N N N N N -38.557 41.703 187.271 7.692  1.603  -0.096 H18 Q7P 33 
Q7P O4  O4  O 0 1 N N N N N N -47.918 35.956 191.806 -2.440 3.500  0.788  O4  Q7P 34 
Q7P H4  H4  H 0 1 N N N N N N -42.306 40.617 188.232 1.001  -2.476 -0.164 H4  Q7P 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Q7P O1  C8  SING N N 1  
Q7P C8  C7  SING N N 2  
Q7P C7  C6  SING N N 3  
Q7P C5  C6  SING N N 4  
Q7P C5  N1  SING N N 5  
Q7P O2  C9  DOUB N N 6  
Q7P N2  C9  SING N N 7  
Q7P N2  C4  SING N N 8  
Q7P N1  C4  SING N N 9  
Q7P C9  N3  SING N N 10 
Q7P C4  C3  DOUB N N 11 
Q7P N3  C10 SING N N 12 
Q7P C3  N   SING N N 13 
Q7P C3  C10 SING N N 14 
Q7P N   C2  DOUB N N 15 
Q7P C10 O3  DOUB N N 16 
Q7P C   C1  SING N N 17 
Q7P C2  C1  SING N N 18 
Q7P C   H1  SING N N 19 
Q7P C   H2  SING N N 20 
Q7P C   H3  SING N N 21 
Q7P C2  H6  SING N N 22 
Q7P C5  H8  SING N N 23 
Q7P C5  H9  SING N N 24 
Q7P C6  H10 SING N N 25 
Q7P C6  H11 SING N N 26 
Q7P C7  H12 SING N N 27 
Q7P C7  H13 SING N N 28 
Q7P C8  H14 SING N N 29 
Q7P C8  H15 SING N N 30 
Q7P N1  H16 SING N N 31 
Q7P N3  H17 SING N N 32 
Q7P O1  H18 SING N N 33 
Q7P C1  O4  DOUB N N 34 
Q7P N2  H4  SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Q7P SMILES           ACDLabs              12.01 "C1(NC(=O)C(/N=C/C(C)=O)=C(NCCCCO)N1)=O"                                                                             
Q7P InChI            InChI                1.03  "InChI=1S/C11H16N4O4/c1-7(17)6-13-8-9(12-4-2-3-5-16)14-11(19)15-10(8)18/h6,16H,2-5H2,1H3,(H3,12,14,15,18,19)/b13-6+" 
Q7P InChIKey         InChI                1.03  OCPAQIZKGXRILZ-AWNIVKPZSA-N                                                                                          
Q7P SMILES_CANONICAL CACTVS               3.385 "CC(=O)C=NC1=C(NCCCCO)NC(=O)NC1=O"                                                                                   
Q7P SMILES           CACTVS               3.385 "CC(=O)C=NC1=C(NCCCCO)NC(=O)NC1=O"                                                                                   
Q7P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)/C=N/C1=C(NC(=O)NC1=O)NCCCCO"                                                                                 
Q7P SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)C=NC1=C(NC(=O)NC1=O)NCCCCO"                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Q7P "SYSTEMATIC NAME" ACDLabs              12.01 "6-[(4-hydroxybutyl)amino]-5-[(E)-(2-oxopropylidene)amino]pyrimidine-2,4(1H,3H)-dione"           
Q7P "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-(4-oxidanylbutylamino)-5-[(~{E})-2-oxidanylidenepropylideneamino]-1~{H}-pyrimidine-2,4-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Q7P "Create component" 2019-10-01 RCSB 
Q7P "Initial release"  2020-02-19 RCSB 
Q7P "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            Q7P 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
