data_LKP
#

_chem_comp.id                                   LKP
_chem_comp.name                                 "trans-4-{(1R)-2-[(5S)-6-fluoro-5H-imidazo[5,1-a]isoindol-5-yl]-1-hydroxyethyl}cyclohexan-1-ol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H21 F N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Navoximod
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-02-27
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       316.370
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LKP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6O3I
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LKP  C4   C1   C  0  1  Y  N  N   9.774  28.441  161.650   2.284   0.512  -0.498  C4   LKP   1  
LKP  C14  C2   C  0  1  N  N  N  10.725  27.788  163.926  -0.020   0.191  -1.383  C14  LKP   2  
LKP  C5   C3   C  0  1  Y  N  N   9.980  29.683  161.033   2.762  -0.287   0.540  C5   LKP   3  
LKP  C6   C4   C  0  1  Y  N  N   8.965  30.289  160.286   3.610   0.269   1.500  C6   LKP   4  
LKP  C11  C5   C  0  1  Y  N  N  12.212  31.210  161.394   2.198  -2.900   0.909  C11  LKP   5  
LKP  C7   C6   C  0  1  Y  N  N  11.302  30.183  161.408   2.216  -1.649   0.373  C7   LKP   6  
LKP  C9   C7   C  0  1  Y  N  N  13.088  29.672  162.577   0.946  -2.954  -0.850  C9   LKP   7  
LKP  C12  C8   C  0  1  N  N  S  10.996  28.049  162.439   1.406  -0.362  -1.357  C12  LKP   8  
LKP  C3   C9   C  0  1  Y  N  N   8.526  27.864  161.484   2.644   1.842  -0.574  C3   LKP   9  
LKP  C1   C10  C  0  1  Y  N  N   7.728  29.674  160.182   3.968   1.599   1.414  C1   LKP  10  
LKP  C2   C11  C  0  1  Y  N  N   7.501  28.444  160.780   3.488   2.386   0.382  C2   LKP  11  
LKP  N8   N1   N  0  1  Y  N  N  11.881  29.174  162.178   1.417  -1.694  -0.744  N8   LKP  12  
LKP  N10  N2   N  0  1  Y  N  N  13.328  30.880  162.128   1.417  -3.666   0.139  N10  LKP  13  
LKP  C15  C12  C  0  1  N  N  R  11.708  26.863  164.629  -0.634   0.084   0.014  C15  LKP  14  
LKP  O17  O1   O  0  1  N  N  N  12.984  27.501  164.664   0.085   0.927   0.916  O17  LKP  15  
LKP  C18  C13  C  0  1  N  N  N  11.252  26.399  166.014  -2.099   0.525  -0.038  C18  LKP  16  
LKP  C20  C14  C  0  1  N  N  N   9.967  25.566  165.938  -2.869  -0.378  -1.004  C20  LKP  17  
LKP  C21  C15  C  0  1  N  N  N   9.523  24.992  167.289  -4.333   0.062  -1.055  C21  LKP  18  
LKP  C22  C16  C  0  1  N  N  N  10.636  24.201  167.944  -4.948  -0.045   0.342  C22  LKP  19  
LKP  C24  C17  C  0  1  N  N  N  11.890  25.040  168.086  -4.177   0.858   1.308  C24  LKP  20  
LKP  C25  C18  C  0  1  N  N  N  12.344  25.598  166.733  -2.713   0.418   1.359  C25  LKP  21  
LKP  O26  O2   O  0  1  N  N  N  10.211  23.724  169.228  -6.315   0.366   0.294  O26  LKP  22  
LKP  F27  F1   F  0  1  N  N  N   8.305  26.669  162.069   2.174   2.614  -1.578  F27  LKP  23  
LKP  H1   H1   H  0  1  N  N  N  10.743  28.757  164.447   0.001   1.236  -1.692  H1   LKP  24  
LKP  H2   H2   H  0  1  N  N  N   9.723  27.343  164.013  -0.620  -0.384  -2.089  H2   LKP  25  
LKP  H3   H3   H  0  1  N  N  N   9.145  31.233  159.792   3.986  -0.340   2.309  H3   LKP  26  
LKP  H4   H4   H  0  1  N  N  N  12.072  32.148  160.878   2.723  -3.218   1.798  H4   LKP  27  
LKP  H5   H5   H  0  1  N  N  N  13.778  29.124  163.202   0.287  -3.315  -1.626  H5   LKP  28  
LKP  H13  H6   H  0  1  N  N  N  11.424  27.136  161.998   1.805  -0.413  -2.370  H13  LKP  29  
LKP  H6   H7   H  0  1  N  N  N   6.934  30.156  159.631   4.624   2.028   2.157  H6   LKP  30  
LKP  H7   H8   H  0  1  N  N  N   6.542  27.955  160.694   3.773   3.426   0.321  H7   LKP  31  
LKP  H16  H9   H  0  1  N  N  N  11.797  25.961  164.006  -0.577  -0.948   0.358  H16  LKP  32  
LKP  H8   H10  H  0  1  N  N  N  13.610  26.935  165.101   0.077   1.863   0.671  H8   LKP  33  
LKP  H19  H11  H  0  1  N  N  N  11.038  27.294  166.617  -2.156   1.557  -0.382  H19  LKP  34  
LKP  H9   H12  H  0  1  N  N  N   9.161  26.206  165.551  -2.431  -0.302  -1.999  H9   LKP  35  
LKP  H10  H13  H  0  1  N  N  N  10.136  24.729  165.244  -2.812  -1.411  -0.660  H10  LKP  36  
LKP  H11  H14  H  0  1  N  N  N   9.234  25.820  167.953  -4.390   1.095  -1.400  H11  LKP  37  
LKP  H12  H15  H  0  1  N  N  N   8.659  24.330  167.130  -4.882  -0.581  -1.744  H12  LKP  38  
LKP  H23  H16  H  0  1  N  N  N  10.871  23.342  167.299  -4.890  -1.077   0.686  H23  LKP  39  
LKP  H14  H17  H  0  1  N  N  N  12.693  24.415  168.504  -4.234   1.891   0.964  H14  LKP  40  
LKP  H15  H18  H  0  1  N  N  N  11.685  25.878  168.768  -4.615   0.782   2.303  H15  LKP  41  
LKP  H17  H19  H  0  1  N  N  N  12.642  24.757  166.090  -2.656  -0.615   1.703  H17  LKP  42  
LKP  H18  H20  H  0  1  N  N  N  13.209  26.257  166.899  -2.164   1.061   2.047  H18  LKP  43  
LKP  H20  H21  H  0  1  N  N  N  10.915  23.229  169.631  -6.769   0.324   1.147  H20  LKP  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LKP  C1   C6   DOUB  Y  N   1  
LKP  C1   C2   SING  Y  N   2  
LKP  C6   C5   SING  Y  N   3  
LKP  C2   C3   DOUB  Y  N   4  
LKP  C5   C7   SING  N  N   5  
LKP  C5   C4   DOUB  Y  N   6  
LKP  C11  C7   DOUB  Y  N   7  
LKP  C11  N10  SING  Y  N   8  
LKP  C7   N8   SING  Y  N   9  
LKP  C3   C4   SING  Y  N  10  
LKP  C3   F27  SING  N  N  11  
LKP  C4   C12  SING  N  N  12  
LKP  N10  C9   DOUB  Y  N  13  
LKP  N8   C12  SING  N  N  14  
LKP  N8   C9   SING  Y  N  15  
LKP  C12  C14  SING  N  N  16  
LKP  C14  C15  SING  N  N  17  
LKP  C15  O17  SING  N  N  18  
LKP  C15  C18  SING  N  N  19  
LKP  C20  C18  SING  N  N  20  
LKP  C20  C21  SING  N  N  21  
LKP  C18  C25  SING  N  N  22  
LKP  C25  C24  SING  N  N  23  
LKP  C21  C22  SING  N  N  24  
LKP  C22  C24  SING  N  N  25  
LKP  C22  O26  SING  N  N  26  
LKP  C14  H1   SING  N  N  27  
LKP  C14  H2   SING  N  N  28  
LKP  C6   H3   SING  N  N  29  
LKP  C11  H4   SING  N  N  30  
LKP  C9   H5   SING  N  N  31  
LKP  C12  H13  SING  N  N  32  
LKP  C1   H6   SING  N  N  33  
LKP  C2   H7   SING  N  N  34  
LKP  C15  H16  SING  N  N  35  
LKP  O17  H8   SING  N  N  36  
LKP  C18  H19  SING  N  N  37  
LKP  C20  H9   SING  N  N  38  
LKP  C20  H10  SING  N  N  39  
LKP  C21  H11  SING  N  N  40  
LKP  C21  H12  SING  N  N  41  
LKP  C22  H23  SING  N  N  42  
LKP  C24  H14  SING  N  N  43  
LKP  C24  H15  SING  N  N  44  
LKP  C25  H17  SING  N  N  45  
LKP  C25  H18  SING  N  N  46  
LKP  O26  H20  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LKP  SMILES            ACDLabs               12.01  "c23C(CC(O)C1CCC(CC1)O)n4c(c2cccc3F)cnc4"  
LKP  InChI             InChI                 1.03   "InChI=1S/C18H21FN2O2/c19-14-3-1-2-13-16-9-20-10-21(16)15(18(13)14)8-17(23)11-4-6-12(22)7-5-11/h1-3,9-12,15,17,22-23H,4-8H2/t11-,12-,15-,17+/m0/s1"  
LKP  InChIKey          InChI                 1.03   YGACXVRLDHEXKY-WXRXAMBDSA-N  
LKP  SMILES_CANONICAL  CACTVS                3.385  "O[C@H]1CC[C@@H](CC1)[C@H](O)C[C@@H]2n3cncc3c4cccc(F)c24"  
LKP  SMILES            CACTVS                3.385  "O[CH]1CC[CH](CC1)[CH](O)C[CH]2n3cncc3c4cccc(F)c24"  
LKP  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc-2c(c(c1)F)[C@@H](n3c2cnc3)C[C@H](C4CCC(CC4)O)O"  
LKP  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc-2c(c(c1)F)C(n3c2cnc3)CC(C4CCC(CC4)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LKP  "SYSTEMATIC NAME"  ACDLabs               12.01  "trans-4-{(1R)-2-[(5S)-6-fluoro-5H-imidazo[5,1-a]isoindol-5-yl]-1-hydroxyethyl}cyclohexan-1-ol"  
LKP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "4-[(1~{R})-2-[(5~{S})-6-fluoranyl-5~{H}-imidazo[1,5-b]isoindol-5-yl]-1-oxidanyl-ethyl]cyclohexan-1-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LKP  "Create component"  2019-02-27  RCSB  
LKP  "Modify synonyms"   2019-02-27  RCSB  
LKP  "Initial release"   2019-07-17  RCSB  
LKP  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     LKP
_pdbx_chem_comp_synonyms.name        Navoximod
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
