data_GUP
#

_chem_comp.id                                   GUP
_chem_comp.name                                 alpha-L-gulopyranose
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "alpha-L-gulose; L-gulose; gulose; ALPHA-L-GULOPYRANOSIDE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-16
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       180.156
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GUP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1AO4
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  GUP  alpha-L-gulose          PDB  ?  
2  GUP  L-gulose                PDB  ?  
3  GUP  gulose                  PDB  ?  
4  GUP  ALPHA-L-GULOPYRANOSIDE  PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GUP  O5   O5   O  0  1  N  N  N  19.424  -11.677  22.256   0.730   0.889   0.699  O5   GUP   1  
GUP  C1   C1   C  0  1  N  N  R  18.191  -11.207  22.748   1.135   0.704  -0.655  C1   GUP   2  
GUP  O1   O1   O  0  1  N  Y  N  17.142  -12.173  22.620   1.811  -0.548  -0.782  O1   GUP   3  
GUP  C2   C2   C  0  1  N  N  S  18.336  -10.766  24.197  -0.092   0.712  -1.569  C2   GUP   4  
GUP  O2   O2   O  0  1  N  N  N  16.998  -10.642  24.561   0.321   0.554  -2.927  O2   GUP   5  
GUP  C3   C3   C  0  1  N  N  S  18.897  -11.920  25.046  -1.016  -0.445  -1.174  C3   GUP   6  
GUP  O3   O3   O  0  1  N  N  N  17.882  -12.931  24.975  -0.371  -1.690  -1.453  O3   GUP   7  
GUP  C4   C4   C  0  1  N  N  S  20.219  -12.429  24.434  -1.317  -0.341   0.324  C4   GUP   8  
GUP  O4   O4   O  0  1  N  N  N  21.174  -11.376  24.501  -2.086   0.836   0.577  O4   GUP   9  
GUP  C5   C5   C  0  1  N  N  S  19.950  -12.791  22.953   0.002  -0.271   1.095  C5   GUP  10  
GUP  C6   C6   C  0  1  N  N  N  21.179  -13.193  22.164  -0.287  -0.203   2.596  C6   GUP  11  
GUP  O6   O6   O  0  1  N  N  N  20.780  -13.458  20.822   0.945  -0.140   3.316  O6   GUP  12  
GUP  H1   H1   H  0  1  N  N  N  17.956  -10.330  22.168   1.808   1.510  -0.946  H1   GUP  13  
GUP  HO1  HO1  H  0  1  N  Y  N  16.310  -11.855  22.951   2.579  -0.511  -0.195  HO1  GUP  14  
GUP  H2   H2   H  0  1  N  N  N  18.901   -9.830  24.167  -0.624   1.657  -1.457  H2   GUP  15  
GUP  HO2  HO2  H  0  1  N  Y  N  17.088  -10.366  25.465   0.904   1.298  -3.130  HO2  GUP  16  
GUP  H3   H3   H  0  1  N  N  N  18.974  -11.527  26.075  -1.946  -0.381  -1.739  H3   GUP  17  
GUP  HO3  HO3  H  0  1  N  Y  N  17.527  -12.838  24.084  -0.191  -1.704  -2.403  HO3  GUP  18  
GUP  H4   H4   H  0  1  N  N  N  20.607  -13.308  24.973  -1.879  -1.219   0.645  H4   GUP  19  
GUP  HO4  HO4  H  0  1  N  Y  N  21.460  -11.270  25.413  -2.904   0.751   0.068  HO4  GUP  20  
GUP  H5   H5   H  0  1  N  N  N  19.213  -13.596  22.878   0.595  -1.161   0.880  H5   GUP  21  
GUP  H61  H61  H  0  1  N  N  N  21.627  -14.083  22.589  -0.841  -1.091   2.900  H61  GUP  22  
GUP  H62  H62  H  0  1  N  N  N  21.857  -12.339  22.181  -0.879   0.686   2.811  H62  GUP  23  
GUP  HO6  HO6  H  0  1  N  Y  N  20.390  -12.648  20.481   0.718  -0.098   4.255  HO6  GUP  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GUP  O5  C1   SING  N  N   1  
GUP  O5  C5   SING  N  N   2  
GUP  C1  O1   SING  N  N   3  
GUP  C1  C2   SING  N  N   4  
GUP  C1  H1   SING  N  N   5  
GUP  O1  HO1  SING  N  N   6  
GUP  C2  O2   SING  N  N   7  
GUP  C2  C3   SING  N  N   8  
GUP  C2  H2   SING  N  N   9  
GUP  O2  HO2  SING  N  N  10  
GUP  C3  O3   SING  N  N  11  
GUP  C3  C4   SING  N  N  12  
GUP  C3  H3   SING  N  N  13  
GUP  O3  HO3  SING  N  N  14  
GUP  C4  O4   SING  N  N  15  
GUP  C4  C5   SING  N  N  16  
GUP  C4  H4   SING  N  N  17  
GUP  O4  HO4  SING  N  N  18  
GUP  C5  C6   SING  N  N  19  
GUP  C5  H5   SING  N  N  20  
GUP  C6  O6   SING  N  N  21  
GUP  C6  H61  SING  N  N  22  
GUP  C6  H62  SING  N  N  23  
GUP  O6  HO6  SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GUP  SMILES            ACDLabs               10.04  "OC1C(O)C(OC(O)C1O)CO"  
GUP  SMILES_CANONICAL  CACTVS                3.341  "OC[C@@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O"  
GUP  SMILES            CACTVS                3.341  "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O"  
GUP  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O"  
GUP  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C(O1)O)O)O)O)O"  
GUP  InChI             InChI                 1.03   "InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4-,5-,6+/m0/s1"  
GUP  InChIKey          InChI                 1.03   WQZGKKKJIJFFOK-BYIBVSMXSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GUP  "SYSTEMATIC NAME"                      ACDLabs               10.04  alpha-L-gulopyranose  
GUP  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.5.0  "(2R,3S,4S,5S,6S)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol"  
GUP  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    LGulpa  
GUP  "COMMON NAME"                          GMML                  1.0    a-L-gulopyranose  
GUP  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-L-Gulp  
GUP  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    Gul  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GUP  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
GUP  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GUP  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
GUP  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GUP  "Create component"    1999-07-16  RCSB  
GUP  "Modify descriptor"   2011-06-04  RCSB  
GUP  "Other modification"  2019-08-12  RCSB  
GUP  "Other modification"  2019-12-19  RCSB  
GUP  "Other modification"  2020-07-03  RCSB  
GUP  "Modify name"         2020-07-17  RCSB  
GUP  "Modify synonyms"     2020-07-17  RCSB  
##
