data_D5P
# 
_chem_comp.id                                    D5P 
_chem_comp.name                                  "5-(2-amino-1-ethyl)thio-3-cyclobutyl-7-[4-(pyrazol-1-yl)benzyl]amino-1(2)H-pyrazolo[4,3-d]pyrimidine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H24 N8 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "5-(2-azanylethylsulfanyl)-3-cyclobutyl-N-[(4-pyrazol-1-ylphenyl)methyl]-1H-pyrazolo[4,3-d]pyrimidin-7-amine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-14 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        420.534 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D5P 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QHL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D5P N1  N1  N 0 1 N N N 23.432 -19.916 37.049 -0.999 -6.234 -0.047 N1  D5P 1  
D5P N3  N2  N 0 1 N N N 21.887 -14.139 38.587 0.272  0.190  0.016  N3  D5P 2  
D5P C4  C1  C 0 1 Y N N 22.377 -14.477 37.382 -1.098 -0.002 0.025  C4  D5P 3  
D5P C5  C2  C 0 1 N N N 21.926 -15.010 39.746 1.173  -0.965 0.002  C5  D5P 4  
D5P C6  C3  C 0 1 Y N N 23.181 -14.791 40.537 2.602  -0.487 -0.006 C6  D5P 5  
D5P C7  C4  C 0 1 Y N N 24.030 -15.840 40.834 3.266  -0.276 1.189  C7  D5P 6  
D5P C8  C5  C 0 1 Y N N 25.188 -15.641 41.562 4.576  0.162  1.185  C8  D5P 7  
D5P C10 C6  C 0 1 Y N N 26.966 -13.086 43.568 7.302  1.096  -1.125 C10 D5P 8  
D5P C13 C7  C 0 1 Y N N 24.614 -13.326 41.794 4.558  0.177  -1.218 C13 D5P 9  
D5P C15 C8  C 0 1 Y N N 22.006 -13.774 36.219 -1.974 1.094  0.039  C15 D5P 10 
D5P C17 C9  C 0 1 N N N 22.097 -13.359 32.534 -5.488 2.329  0.072  C17 D5P 11 
D5P C20 C10 C 0 1 N N N 21.508 -14.593 31.744 -5.995 3.159  -1.119 C20 D5P 12 
D5P C21 C11 C 0 1 Y N N 22.510 -14.179 34.978 -3.357 0.847  0.047  C21 D5P 13 
D5P C1  C12 C 0 1 N N N 23.582 -18.676 37.842 -2.266 -5.491 -0.028 C1  D5P 14 
D5P C2  C13 C 0 1 N N N 24.837 -17.879 37.578 -1.977 -3.989 -0.013 C2  D5P 15 
D5P S1  S1  S 0 1 N N N 24.798 -17.135 35.902 -3.539 -3.074 0.010  S1  D5P 16 
D5P C3  C14 C 0 1 Y N N 23.652 -15.829 36.025 -2.925 -1.422 0.024  C3  D5P 17 
D5P N2  N3  N 0 1 Y N N 23.254 -15.486 37.279 -1.611 -1.227 0.015  N2  D5P 18 
D5P C9  C15 C 0 1 Y N N 25.453 -14.381 42.066 5.226  0.391  -0.020 C9  D5P 19 
D5P N4  N4  N 0 1 Y N N 26.640 -14.153 42.808 6.555  0.836  -0.027 N4  D5P 20 
D5P C11 C16 C 0 1 Y N N 28.240 -13.295 44.036 8.523  1.501  -0.706 C11 D5P 21 
D5P C12 C17 C 0 1 Y N N 28.639 -14.496 43.478 8.522  1.495  0.694  C12 D5P 22 
D5P N5  N5  N 0 1 Y N N 27.675 -15.028 42.709 7.345  1.091  1.101  N5  D5P 23 
D5P C14 C18 C 0 1 Y N N 23.480 -13.534 41.031 3.250  -0.266 -1.208 C14 D5P 24 
D5P N6  N6  N 0 1 Y N N 21.241 -12.703 35.960 -1.815 2.455  0.047  N6  D5P 25 
D5P N7  N7  N 0 1 Y N N 21.182 -12.474 34.619 -3.089 3.038  0.060  N7  D5P 26 
D5P C16 C19 C 0 1 Y N N 21.967 -13.355 34.012 -3.998 2.104  0.060  C16 D5P 27 
D5P C18 C20 C 0 1 N N N 23.466 -13.693 31.957 -5.928 3.496  0.973  C18 D5P 28 
D5P C19 C21 C 0 1 N N N 22.799 -14.675 30.953 -6.939 3.860  -0.129 C19 D5P 29 
D5P N8  N8  N 0 1 Y N N 23.349 -15.231 34.859 -3.788 -0.423 0.041  N8  D5P 30 
D5P H1  H1  H 0 1 N N N 22.575 -20.368 37.296 -0.415 -5.971 0.733  H1  D5P 31 
D5P H2  H2  H 0 1 N N N 23.421 -19.689 36.075 -1.163 -7.229 -0.057 H2  D5P 32 
D5P H4  H4  H 0 1 N N N 22.373 -13.307 38.855 0.636  1.089  0.019  H4  D5P 33 
D5P H5  H5  H 0 1 N N N 21.056 -14.799 40.385 0.998  -1.574 0.889  H5  D5P 34 
D5P H6  H6  H 0 1 N N N 21.889 -16.057 39.411 0.985  -1.562 -0.891 H6  D5P 35 
D5P H7  H7  H 0 1 N N N 23.784 -16.834 40.491 2.759  -0.454 2.126  H7  D5P 36 
D5P H8  H8  H 0 1 N N N 25.875 -16.457 41.734 5.093  0.328  2.118  H8  D5P 37 
D5P H9  H9  H 0 1 N N N 26.342 -12.228 43.770 6.982  0.993  -2.151 H9  D5P 38 
D5P H10 H10 H 0 1 N N N 24.840 -12.341 42.174 5.061  0.354  -2.157 H10 D5P 39 
D5P H11 H11 H 0 1 N N N 21.714 -12.423 32.101 -6.054 1.413  0.238  H11 D5P 40 
D5P H12 H12 H 0 1 N N N 20.620 -14.360 31.138 -5.240 3.820  -1.544 H12 D5P 41 
D5P H13 H13 H 0 1 N N N 21.304 -15.475 32.369 -6.513 2.567  -1.874 H13 D5P 42 
D5P H14 H14 H 0 1 N N N 22.719 -18.029 37.625 -2.847 -5.740 -0.916 H14 D5P 43 
D5P H15 H15 H 0 1 N N N 23.575 -18.952 38.907 -2.833 -5.761 0.863  H15 D5P 44 
D5P H16 H16 H 0 1 N N N 25.710 -18.544 37.657 -1.397 -3.739 0.875  H16 D5P 45 
D5P H17 H17 H 0 1 N N N 24.919 -17.077 38.326 -1.411 -3.719 -0.905 H17 D5P 46 
D5P H18 H18 H 0 1 N N N 28.808 -12.658 44.698 9.352  1.780  -1.339 H18 D5P 47 
D5P H19 H19 H 0 1 N N N 29.606 -14.950 43.640 9.352  1.769  1.328  H19 D5P 48 
D5P H20 H20 H 0 1 N N N 22.820 -12.706 40.818 2.730  -0.436 -2.139 H20 D5P 49 
D5P H21 H21 H 0 1 N N N 20.779 -12.151 36.654 -0.970 2.930  0.044  H21 D5P 50 
D5P H22 H22 H 0 1 N N N 24.149 -14.176 32.671 -6.392 3.176  1.906  H22 D5P 51 
D5P H23 H23 H 0 1 N N N 23.974 -12.841 31.482 -5.153 4.248  1.122  H23 D5P 52 
D5P H24 H24 H 0 1 N N N 23.253 -15.677 30.934 -7.033 4.932  -0.299 H24 D5P 53 
D5P H25 H25 H 0 1 N N N 22.724 -14.287 29.926 -7.903 3.362  -0.017 H25 D5P 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D5P C19 C20 SING N N 1  
D5P C19 C18 SING N N 2  
D5P C20 C17 SING N N 3  
D5P C18 C17 SING N N 4  
D5P C17 C16 SING N N 5  
D5P C16 N7  DOUB Y N 6  
D5P C16 C21 SING Y N 7  
D5P N7  N6  SING Y N 8  
D5P N8  C21 DOUB Y N 9  
D5P N8  C3  SING Y N 10 
D5P C21 C15 SING Y N 11 
D5P S1  C3  SING N N 12 
D5P S1  C2  SING N N 13 
D5P N6  C15 SING Y N 14 
D5P C3  N2  DOUB Y N 15 
D5P C15 C4  DOUB Y N 16 
D5P N1  C1  SING N N 17 
D5P N2  C4  SING Y N 18 
D5P C4  N3  SING N N 19 
D5P C2  C1  SING N N 20 
D5P N3  C5  SING N N 21 
D5P C5  C6  SING N N 22 
D5P C6  C7  DOUB Y N 23 
D5P C6  C14 SING Y N 24 
D5P C7  C8  SING Y N 25 
D5P C14 C13 DOUB Y N 26 
D5P C8  C9  DOUB Y N 27 
D5P C13 C9  SING Y N 28 
D5P C9  N4  SING N N 29 
D5P N5  N4  SING Y N 30 
D5P N5  C12 DOUB Y N 31 
D5P N4  C10 SING Y N 32 
D5P C12 C11 SING Y N 33 
D5P C10 C11 DOUB Y N 34 
D5P N1  H1  SING N N 35 
D5P N1  H2  SING N N 36 
D5P N3  H4  SING N N 37 
D5P C5  H5  SING N N 38 
D5P C5  H6  SING N N 39 
D5P C7  H7  SING N N 40 
D5P C8  H8  SING N N 41 
D5P C10 H9  SING N N 42 
D5P C13 H10 SING N N 43 
D5P C17 H11 SING N N 44 
D5P C20 H12 SING N N 45 
D5P C20 H13 SING N N 46 
D5P C1  H14 SING N N 47 
D5P C1  H15 SING N N 48 
D5P C2  H16 SING N N 49 
D5P C2  H17 SING N N 50 
D5P C11 H18 SING N N 51 
D5P C12 H19 SING N N 52 
D5P C14 H20 SING N N 53 
D5P N6  H21 SING N N 54 
D5P C18 H22 SING N N 55 
D5P C18 H23 SING N N 56 
D5P C19 H24 SING N N 57 
D5P C19 H25 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D5P InChI            InChI                1.06  "InChI=1S/C21H24N8S/c22-9-12-30-21-25-18-17(15-3-1-4-15)27-28-19(18)20(26-21)23-13-14-5-7-16(8-6-14)29-11-2-10-24-29/h2,5-8,10-11,15H,1,3-4,9,12-13,22H2,(H,27,28)(H,23,25,26)" 
D5P InChIKey         InChI                1.06  MJACTWDJXKRKAV-UHFFFAOYSA-N                                                                                                                                                     
D5P SMILES_CANONICAL CACTVS               3.385 "NCCSc1nc(NCc2ccc(cc2)n3cccn3)c4[nH]nc(C5CCC5)c4n1"                                                                                                                             
D5P SMILES           CACTVS               3.385 "NCCSc1nc(NCc2ccc(cc2)n3cccn3)c4[nH]nc(C5CCC5)c4n1"                                                                                                                             
D5P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnn(c1)c2ccc(cc2)CNc3c4c(c(n[nH]4)C5CCC5)nc(n3)SCCN"                                                                                                                         
D5P SMILES           "OpenEye OEToolkits" 2.0.7 "c1cnn(c1)c2ccc(cc2)CNc3c4c(c(n[nH]4)C5CCC5)nc(n3)SCCN"                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           D5P 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "5-(2-azanylethylsulfanyl)-3-cyclobutyl-~{N}-[(4-pyrazol-1-ylphenyl)methyl]-1~{H}-pyrazolo[4,3-d]pyrimidin-7-amine" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      D5P 
_pdbx_chem_comp_synonyms.name         "5-(2-azanylethylsulfanyl)-3-cyclobutyl-N-[(4-pyrazol-1-ylphenyl)methyl]-1H-pyrazolo[4,3-d]pyrimidin-7-amine" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D5P "Create component"  2021-12-14 PDBE 
D5P "Modify synonyms"   2022-02-16 PDBE 
D5P "Initial release"   2022-07-06 RCSB 
D5P "Modify descriptor" 2022-08-22 RCSB 
# 
