data_61P
#

_chem_comp.id                                   61P
_chem_comp.name                                 "2-amino-N'-{3-[(E)-{2-[(2S)-2-amino-3-(1H-indol-3-yl)propanoyl]hydrazinylidene}methyl]benzylidene}-3-(1H-indol-2-yl)propanehydrazide (non-preferred name)"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C30 H30 N8 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-01-13
_chem_comp.pdbx_modified_date                   2019-09-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       534.612
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    61P
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5HCT
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
61P  C11  C1   C  0  1  N  N  N  24.497  12.664  57.627    2.441   0.647  -0.224  C11  61P   1  
61P  C12  C2   C  0  1  Y  N  N  24.429  11.451  56.807    1.131   1.313  -0.093  C12  61P   2  
61P  C13  C3   C  0  1  Y  N  N  23.639  11.419  55.661    1.049   2.708  -0.101  C13  61P   3  
61P  C14  C4   C  0  1  Y  N  N  23.597  10.288  54.865   -0.177   3.332   0.015  C14  61P   4  
61P  C15  C5   C  0  1  Y  N  N  24.334   9.169  55.208   -1.330   2.585   0.141  C15  61P   5  
61P  N4   N1   N  0  1  N  N  N  26.597   7.891  57.763   -3.647   0.986   0.393  N4   61P   6  
61P  O1   O1   O  0  1  N  N  N  28.018   7.226  60.008   -6.070   2.058   0.625  O1   61P   7  
61P  C18  C6   C  0  1  N  N  N  27.940   6.440  59.064   -6.011   0.846   0.634  C18  61P   8  
61P  C19  C7   C  0  1  N  N  S  28.637   5.082  59.120   -7.272   0.032   0.771  C19  61P   9  
61P  C20  C8   C  0  1  N  N  N  28.170   4.275  60.339   -7.706  -0.471  -0.608  C20  61P  10  
61P  C21  C9   C  0  1  Y  N  N  26.683   4.060  60.418   -8.894  -1.385  -0.457  C21  61P  11  
61P  C28  C10  C  0  1  Y  N  N  25.970   2.823  60.234  -10.300  -0.982  -0.382  C28  61P  12  
61P  C27  C11  C  0  1  Y  N  N  26.347   1.520  59.924  -10.960   0.248  -0.419  C27  61P  13  
61P  C26  C12  C  0  1  Y  N  N  25.383   0.526  59.828  -12.322   0.291  -0.322  C26  61P  14  
61P  C25  C13  C  0  1  Y  N  N  24.040   0.815  60.034  -13.056  -0.880  -0.188  C25  61P  15  
61P  C24  C14  C  0  1  Y  N  N  23.635   2.104  60.342  -12.426  -2.104  -0.149  C24  61P  16  
61P  C23  C15  C  0  1  Y  N  N  24.606   3.097  60.443  -11.040  -2.171  -0.246  C23  61P  17  
61P  N7   N2   N  0  1  Y  N  N  24.493   4.434  60.736  -10.138  -3.211  -0.240  N7   61P  18  
61P  C22  C16  C  0  1  Y  N  N  25.740   5.001  60.718   -8.866  -2.725  -0.372  C22  61P  19  
61P  N6   N3   N  0  1  N  N  N  30.114   5.314  59.139   -8.335   0.868   1.344  N6   61P  20  
61P  N5   N4   N  0  1  N  N  N  27.247   6.686  57.931   -4.819   0.228   0.521  N5   61P  21  
61P  C17  C17  C  0  1  N  N  N  25.878   7.961  56.709   -2.499   0.391   0.285  C17  61P  22  
61P  C16  C18  C  0  1  Y  N  N  25.122   9.161  56.357   -1.265   1.188   0.151  C16  61P  23  
61P  C29  C19  C  0  1  Y  N  N  25.168  10.313  57.148   -0.031   0.551   0.033  C29  61P  24  
61P  H1   H1   H  0  1  N  N  N  24.750  13.267  58.486    2.501  -0.431  -0.222  H1   61P  25  
61P  H4   H4   H  0  1  N  N  N  23.053  12.285  55.391    1.948   3.299  -0.199  H4   61P  26  
61P  H5   H5   H  0  1  N  N  N  22.987  10.279  53.974   -0.233   4.411   0.008  H5   61P  27  
61P  H6   H6   H  0  1  N  N  N  24.298   8.292  54.579   -2.286   3.080   0.232  H6   61P  28  
61P  H8   H8   H  0  1  N  N  N  28.377   4.519  58.211   -7.085  -0.819   1.426  H8   61P  29  
61P  H9   H9   H  0  1  N  N  N  28.657   3.289  60.305   -7.978   0.378  -1.235  H9   61P  30  
61P  H10  H10  H  0  1  N  N  N  28.488   4.810  61.246   -6.884  -1.017  -1.071  H10  61P  31  
61P  H11  H11  H  0  1  N  N  N  27.387   1.283  59.758  -10.396   1.163  -0.524  H11  61P  32  
61P  H12  H12  H  0  1  N  N  N  25.681  -0.485  59.590  -12.832   1.242  -0.351  H12  61P  33  
61P  H13  H13  H  0  1  N  N  N  23.305   0.028  59.953  -14.133  -0.831  -0.112  H13  61P  34  
61P  H14  H14  H  0  1  N  N  N  22.591   2.333  60.500  -13.006  -3.009  -0.044  H14  61P  35  
61P  H15  H15  H  0  1  N  N  N  23.639   4.916  60.931  -10.370  -4.149  -0.158  H15  61P  36  
61P  H16  H16  H  0  1  N  N  N  25.947   6.043  60.913   -7.971  -3.329  -0.401  H16  61P  37  
61P  H17  H17  H  0  1  N  N  N  30.590   4.435  59.176   -8.526   1.664   0.755  H17  61P  38  
61P  H18  H18  H  0  1  N  N  N  30.385   5.805  58.311   -9.172   0.328   1.506  H18  61P  39  
61P  H20  H20  H  0  1  N  N  N  27.205   5.992  57.212   -4.772  -0.740   0.527  H20  61P  40  
61P  H21  H21  H  0  1  N  N  N  25.827   7.103  56.055   -2.446  -0.688   0.292  H21  61P  41  
61P  H23  H23  H  0  1  N  N  N  25.783  10.325  58.036    0.026  -0.528   0.036  H23  61P  42  
61P  N1   N5   N  0  1  N  N  N       ?       ?       ?    3.520   1.358  -0.346  N1   61P  43  
61P  N2   N6   N  0  1  N  N  N       ?       ?       ?    4.763   0.726  -0.476  N2   61P  44  
61P  C3   C20  C  0  1  N  N  N       ?       ?       ?    5.884   1.464  -0.604  C3   61P  45  
61P  C4   C21  C  0  1  N  N  N       ?       ?       ?    7.222   0.784  -0.743  C4   61P  46  
61P  O2   O2   O  0  1  N  N  N       ?       ?       ?    5.816   2.675  -0.606  O2   61P  47  
61P  N3   N7   N  0  1  N  N  N       ?       ?       ?    8.188   1.721  -1.332  N3   61P  48  
61P  C7   C22  C  0  1  N  N  N       ?       ?       ?    7.715   0.342   0.636  C7   61P  49  
61P  C8   C23  C  0  1  Y  N  N       ?       ?       ?    8.992  -0.445   0.484  C8   61P  50  
61P  N8   N8   N  0  1  Y  N  N       ?       ?       ?   10.253   0.076   0.592  N8   61P  51  
61P  C2   C24  C  0  1  Y  N  N       ?       ?       ?    9.060  -1.761   0.228  C2   61P  52  
61P  C6   C25  C  0  1  Y  N  N       ?       ?       ?   10.481  -2.111   0.161  C6   61P  53  
61P  C9   C26  C  0  1  Y  N  N       ?       ?       ?   11.187  -0.917   0.398  C9   61P  54  
61P  C5   C27  C  0  1  Y  N  N       ?       ?       ?   12.578  -0.937   0.399  C5   61P  55  
61P  C10  C28  C  0  1  Y  N  N       ?       ?       ?   11.178  -3.298  -0.069  C10  61P  56  
61P  C30  C30  C  0  1  Y  N  N       ?       ?       ?   12.545  -3.294  -0.067  C30  61P  57  
61P  C1   C31  C  0  1  Y  N  N       ?       ?       ?   13.246  -2.119   0.167  C1   61P  58  
61P  H2   H2   H  0  1  N  N  N       ?       ?       ?    4.818  -0.243  -0.475  H2   61P  59  
61P  H3   H3   H  0  1  N  N  N       ?       ?       ?    7.121  -0.087  -1.390  H3   61P  60  
61P  H7   H7   H  0  1  N  N  N       ?       ?       ?    8.299   2.538  -0.751  H7   61P  61  
61P  H19  H19  H  0  1  N  N  N       ?       ?       ?    9.075   1.270  -1.496  H19  61P  62  
61P  H22  H22  H  0  1  N  N  N       ?       ?       ?    7.901   1.220   1.254  H22  61P  63  
61P  H24  H24  H  0  1  N  N  N       ?       ?       ?    6.958  -0.282   1.110  H24  61P  64  
61P  H25  H25  H  0  1  N  N  N       ?       ?       ?   10.458   1.005   0.777  H25  61P  65  
61P  H26  H26  H  0  1  N  N  N       ?       ?       ?    8.226  -2.434   0.096  H26  61P  66  
61P  H27  H27  H  0  1  N  N  N       ?       ?       ?   13.132  -0.028   0.581  H27  61P  67  
61P  H28  H28  H  0  1  N  N  N       ?       ?       ?   10.639  -4.217  -0.248  H28  61P  68  
61P  H29  H29  H  0  1  N  N  N       ?       ?       ?   13.083  -4.213  -0.244  H29  61P  69  
61P  H30  H30  H  0  1  N  N  N       ?       ?       ?   14.325  -2.133   0.168  H30  61P  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
61P  C14  C15  DOUB  Y  N   1  
61P  C14  C13  SING  Y  N   2  
61P  C15  C16  SING  Y  N   3  
61P  C13  C12  DOUB  Y  N   4  
61P  C16  C17  SING  N  N   5  
61P  C16  C29  DOUB  Y  N   6  
61P  C17  N4   DOUB  N  E   7  
61P  C12  C29  SING  Y  N   8  
61P  C12  C11  SING  N  N   9  
61P  N4   N5   SING  N  N  10  
61P  N5   C18  SING  N  N  11  
61P  C18  C19  SING  N  N  12  
61P  C18  O1   DOUB  N  N  13  
61P  C19  N6   SING  N  N  14  
61P  C19  C20  SING  N  N  15  
61P  C26  C27  DOUB  Y  N  16  
61P  C26  C25  SING  Y  N  17  
61P  C27  C28  SING  Y  N  18  
61P  C25  C24  DOUB  Y  N  19  
61P  C28  C21  SING  Y  N  20  
61P  C28  C23  DOUB  Y  N  21  
61P  C20  C21  SING  N  N  22  
61P  C24  C23  SING  Y  N  23  
61P  C21  C22  DOUB  Y  N  24  
61P  C23  N7   SING  Y  N  25  
61P  C22  N7   SING  Y  N  26  
61P  C11  H1   SING  N  N  27  
61P  C13  H4   SING  N  N  28  
61P  C14  H5   SING  N  N  29  
61P  C15  H6   SING  N  N  30  
61P  C19  H8   SING  N  N  31  
61P  C20  H9   SING  N  N  32  
61P  C20  H10  SING  N  N  33  
61P  C27  H11  SING  N  N  34  
61P  C26  H12  SING  N  N  35  
61P  C25  H13  SING  N  N  36  
61P  C24  H14  SING  N  N  37  
61P  N7   H15  SING  N  N  38  
61P  C22  H16  SING  N  N  39  
61P  N6   H17  SING  N  N  40  
61P  N6   H18  SING  N  N  41  
61P  N5   H20  SING  N  N  42  
61P  C17  H21  SING  N  N  43  
61P  C29  H23  SING  N  N  44  
61P  C11  N1   DOUB  N  E  45  
61P  N1   N2   SING  N  N  46  
61P  N2   C3   SING  N  N  47  
61P  C3   C4   SING  N  N  48  
61P  C3   O2   DOUB  N  N  49  
61P  C4   N3   SING  N  N  50  
61P  C4   C7   SING  N  N  51  
61P  C7   C8   SING  N  N  52  
61P  C8   N8   SING  Y  N  53  
61P  C8   C2   DOUB  Y  N  54  
61P  N8   C9   SING  Y  N  55  
61P  C2   C6   SING  Y  N  56  
61P  C6   C9   SING  Y  N  57  
61P  C9   C5   DOUB  Y  N  58  
61P  C6   C10  DOUB  Y  N  59  
61P  C10  C30  SING  Y  N  60  
61P  C5   C1   SING  Y  N  61  
61P  C30  C1   DOUB  Y  N  62  
61P  N2   H2   SING  N  N  63  
61P  C4   H3   SING  N  N  64  
61P  N3   H7   SING  N  N  65  
61P  N3   H19  SING  N  N  66  
61P  C7   H22  SING  N  N  67  
61P  C7   H24  SING  N  N  68  
61P  N8   H25  SING  N  N  69  
61P  C2   H26  SING  N  N  70  
61P  C5   H27  SING  N  N  71  
61P  C10  H28  SING  N  N  72  
61P  C30  H29  SING  N  N  73  
61P  C1   H30  SING  N  N  74  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
61P  SMILES            ACDLabs               12.01  "C(=N\NC(C(N)Cc1nc2c(c1)cccc2)=O)\c3cc(ccc3)[C@H]=NNC(=O)C(N)Cc4cnc5c4cccc5"  
61P  InChI             InChI                 1.03   "InChI=1S/C30H30N8O2/c31-25(14-22-18-33-28-11-4-2-9-24(22)28)29(39)37-34-16-19-6-5-7-20(12-19)17-35-38-30(40)26(32)15-23-13-21-8-1-3-10-27(21)36-23/h1-13,16-18,25-26,33,36H,14-15,31-32H2,(H,37,39)(H,38,40)/b34-16+,35-17?/t25-,26?/m0/s1"  
61P  InChIKey          InChI                 1.03   ZUYUCFMTHKDHJX-JQHDDIPESA-N  
61P  SMILES_CANONICAL  CACTVS                3.385  "NC(Cc1[nH]c2ccccc2c1)C(=O)N/N=C/c3cccc(\C=N\NC(=O)[C@@H](N)Cc4c[nH]c5ccccc45)c3"  
61P  SMILES            CACTVS                3.385  "NC(Cc1[nH]c2ccccc2c1)C(=O)NN=Cc3cccc(C=NNC(=O)[CH](N)Cc4c[nH]c5ccccc45)c3"  
61P  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.4  "c1ccc2c(c1)cc([nH]2)CC(C(=O)NN=Cc3cccc(c3)/C=N/NC(=O)[C@H](Cc4c[nH]c5c4cccc5)N)N"  
61P  SMILES            "OpenEye OEToolkits"  2.0.4  "c1ccc2c(c1)cc([nH]2)CC(C(=O)NN=Cc3cccc(c3)C=NNC(=O)C(Cc4c[nH]c5c4cccc5)N)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
61P  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-amino-N'-{3-[(E)-{2-[(2S)-2-amino-3-(1H-indol-3-yl)propanoyl]hydrazinylidene}methyl]benzylidene}-3-(1H-indol-2-yl)propanehydrazide (non-preferred name)"  
61P  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.4  "2-azanyl-~{N}-[[3-[(~{E})-[[(2~{S})-2-azanyl-3-(1~{H}-indol-3-yl)propanoyl]hydrazinylidene]methyl]phenyl]methylideneamino]-3-(1~{H}-indol-2-yl)propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
61P  "Create component"    2016-01-13  EBI   
61P  "Initial release"     2016-07-20  RCSB  
61P  "Other modification"  2019-09-04  EBI   
##
