data_1YP
# 
_chem_comp.id                                    1YP 
_chem_comp.name                                  "1-ethyl-3-{5'-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]-3,3'-bipyridin-6-yl}urea" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H14 F3 N7 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-08-06 
_chem_comp.pdbx_modified_date                    2013-10-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        477.420 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1YP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4LPB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1YP C1  C1  C 0 1 N N N 19.601 34.051 1.587  8.281  -3.985 0.464  C1  1YP 1  
1YP C2  C2  C 0 1 N N N 19.261 32.609 1.873  6.767  -4.069 0.262  C2  1YP 2  
1YP C3  C3  C 0 1 N N N 17.643 31.609 3.439  4.867  -2.548 0.139  C3  1YP 3  
1YP N6  N6  N 0 1 N N N 10.069 30.742 11.867 -5.483 -3.310 1.610  N6  1YP 4  
1YP C7  C7  C 0 1 Y N N 14.103 29.714 6.628  0.323  -0.800 -0.636 C7  1YP 5  
1YP C8  C8  C 0 1 Y N N 13.788 30.960 6.139  0.962  -2.030 -0.749 C8  1YP 6  
1YP C9  C9  C 0 1 Y N N 13.127 29.065 7.479  -1.122 -0.672 -0.937 C9  1YP 7  
1YP C10 C10 C 0 1 Y N N 12.520 29.698 8.545  -2.065 -1.398 -0.207 C10 1YP 8  
1YP C11 C11 C 0 1 Y N N 11.566 28.991 9.246  -3.415 -1.240 -0.532 C11 1YP 9  
1YP C12 C12 C 0 1 Y N N 11.246 27.704 8.889  -3.766 -0.369 -1.565 C12 1YP 10 
1YP C13 C13 C 0 1 Y N N 12.715 27.778 7.195  -1.561 0.180  -1.951 C13 1YP 11 
1YP C14 C14 C 0 1 N N N 10.850 29.599 10.364 -4.457 -1.985 0.208  C14 1YP 12 
1YP C15 C15 C 0 1 N N N 9.323  29.590 11.815 -6.422 -2.720 0.841  C15 1YP 13 
1YP C16 C16 C 0 1 Y N N 15.755 27.867 6.670  0.438  1.649  -0.082 C16 1YP 14 
1YP C19 C19 C 0 1 N N N 15.815 25.341 9.204  0.947  5.208  0.491  C19 1YP 15 
1YP N1  N1  N 0 1 N N N 17.948 32.525 2.460  6.195  -2.721 0.296  N1  1YP 16 
1YP O1  O1  O 0 1 N N N 18.363 30.674 3.756  4.145  -3.511 -0.031 O1  1YP 17 
1YP N2  N2  N 0 1 N N N 16.421 31.912 3.998  4.340  -1.308 0.170  N2  1YP 18 
1YP C4  C4  C 0 1 Y N N 15.667 31.129 4.894  2.986  -1.119 -0.098 C4  1YP 19 
1YP C5  C5  C 0 1 Y N N 16.086 29.886 5.325  2.430  0.144  0.047  C5  1YP 20 
1YP C6  C6  C 0 1 Y N N 15.304 29.165 6.209  1.072  0.323  -0.224 C6  1YP 21 
1YP N3  N3  N 0 1 Y N N 14.527 31.686 5.301  2.247  -2.150 -0.482 N3  1YP 22 
1YP N4  N4  N 0 1 Y N N 11.807 27.062 7.865  -2.843 0.297  -2.230 N4  1YP 23 
1YP N5  N5  N 0 1 N N N 11.039 30.738 10.929 -4.240 -2.818 1.185  N5  1YP 24 
1YP O2  O2  O 0 1 N N N 8.372  29.282 12.518 -7.625 -2.892 0.914  O2  1YP 25 
1YP O3  O3  O 0 1 N N N 9.837  28.825 10.821 -5.786 -1.909 -0.020 O3  1YP 26 
1YP N7  N7  N 0 1 Y N N 15.473 27.337 7.841  1.067  2.769  0.139  N7  1YP 27 
1YP C17 C17 C 0 1 Y N N 16.038 26.094 7.964  0.337  3.854  0.236  C17 1YP 28 
1YP C18 C18 C 0 1 Y N N 16.760 25.676 6.871  -0.983 3.684  0.095  C18 1YP 29 
1YP S1  S1  S 0 1 Y N N 16.733 26.885 5.656  -1.291 1.973  -0.193 S1  1YP 30 
1YP F1  F1  F 0 1 N N N 16.444 24.136 9.180  0.540  6.099  -0.509 F1  1YP 31 
1YP F2  F2  F 0 1 N N N 16.236 26.014 10.305 0.525  5.683  1.737  F2  1YP 32 
1YP F3  F3  F 0 1 N N N 14.491 25.094 9.381  2.342  5.101  0.480  F3  1YP 33 
1YP H1  H1  H 0 1 N N N 20.604 34.110 1.139  8.708  -4.988 0.438  H1  1YP 34 
1YP H2  H2  H 0 1 N N N 18.862 34.470 0.888  8.721  -3.383 -0.332 H2  1YP 35 
1YP H3  H3  H 0 1 N N N 19.584 34.625 2.525  8.495  -3.524 1.428  H3  1YP 36 
1YP H4  H4  H 0 1 N N N 19.279 32.036 0.934  6.554  -4.530 -0.702 H4  1YP 37 
1YP H5  H5  H 0 1 N N N 20.001 32.191 2.571  6.327  -4.670 1.057  H5  1YP 38 
1YP H6  H6  H 0 1 N N N 9.914  31.487 12.516 -5.638 -3.949 2.324  H6  1YP 39 
1YP H7  H7  H 0 1 N N N 12.853 31.391 6.465  0.398  -2.897 -1.058 H7  1YP 40 
1YP H8  H8  H 0 1 N N N 12.782 30.709 8.820  -1.760 -2.064 0.586  H8  1YP 41 
1YP H9  H9  H 0 1 N N N 10.499 27.184 9.470  -4.806 -0.241 -1.824 H9  1YP 42 
1YP H10 H10 H 0 1 N N N 13.175 27.300 6.342  -0.839 0.749  -2.518 H10 1YP 43 
1YP H11 H11 H 0 1 N N N 17.236 33.153 2.145  6.771  -1.952 0.432  H11 1YP 44 
1YP H12 H12 H 0 1 N N N 16.022 32.791 3.737  4.904  -0.547 0.379  H12 1YP 45 
1YP H13 H13 H 0 1 N N N 17.022 29.478 4.973  3.039  0.978  0.365  H13 1YP 46 
1YP H14 H14 H 0 1 N N N 17.269 24.727 6.790  -1.731 4.462  0.146  H14 1YP 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1YP C1  C2  SING N N 1  
1YP C2  N1  SING N N 2  
1YP N1  C3  SING N N 3  
1YP C3  O1  DOUB N N 4  
1YP C3  N2  SING N N 5  
1YP N2  C4  SING N N 6  
1YP C4  N3  DOUB Y N 7  
1YP C4  C5  SING Y N 8  
1YP N3  C8  SING Y N 9  
1YP C5  C6  DOUB Y N 10 
1YP S1  C16 SING Y N 11 
1YP S1  C18 SING Y N 12 
1YP C8  C7  DOUB Y N 13 
1YP C6  C7  SING Y N 14 
1YP C6  C16 SING N N 15 
1YP C7  C9  SING N N 16 
1YP C16 N7  DOUB Y N 17 
1YP C18 C17 DOUB Y N 18 
1YP C13 C9  DOUB Y N 19 
1YP C13 N4  SING Y N 20 
1YP C9  C10 SING Y N 21 
1YP N7  C17 SING Y N 22 
1YP N4  C12 DOUB Y N 23 
1YP C17 C19 SING N N 24 
1YP C10 C11 DOUB Y N 25 
1YP C12 C11 SING Y N 26 
1YP F1  C19 SING N N 27 
1YP C19 F3  SING N N 28 
1YP C19 F2  SING N N 29 
1YP C11 C14 SING N N 30 
1YP C14 O3  SING N N 31 
1YP C14 N5  DOUB N N 32 
1YP O3  C15 SING N N 33 
1YP N5  N6  SING N N 34 
1YP C15 N6  SING N N 35 
1YP C15 O2  DOUB N N 36 
1YP C1  H1  SING N N 37 
1YP C1  H2  SING N N 38 
1YP C1  H3  SING N N 39 
1YP C2  H4  SING N N 40 
1YP C2  H5  SING N N 41 
1YP N6  H6  SING N N 42 
1YP C8  H7  SING N N 43 
1YP C10 H8  SING N N 44 
1YP C12 H9  SING N N 45 
1YP C13 H10 SING N N 46 
1YP N1  H11 SING N N 47 
1YP N2  H12 SING N N 48 
1YP C5  H13 SING N N 49 
1YP C18 H14 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1YP SMILES           ACDLabs              12.01 "O=C1OC(=NN1)c4cc(c2cnc(NC(=O)NCC)cc2c3nc(cs3)C(F)(F)F)cnc4"                                                                                                           
1YP InChI            InChI                1.03  "InChI=1S/C19H14F3N7O3S/c1-2-24-17(30)27-14-4-11(16-26-13(8-33-16)19(20,21)22)12(7-25-14)9-3-10(6-23-5-9)15-28-29-18(31)32-15/h3-8H,2H2,1H3,(H,29,31)(H2,24,25,27,30)" 
1YP InChIKey         InChI                1.03  VIHKUWHFUWMXKJ-UHFFFAOYSA-N                                                                                                                                            
1YP SMILES_CANONICAL CACTVS               3.385 "CCNC(=O)Nc1cc(c2scc(n2)C(F)(F)F)c(cn1)c3cncc(c3)C4=NNC(=O)O4"                                                                                                         
1YP SMILES           CACTVS               3.385 "CCNC(=O)Nc1cc(c2scc(n2)C(F)(F)F)c(cn1)c3cncc(c3)C4=NNC(=O)O4"                                                                                                         
1YP SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCNC(=O)Nc1cc(c(cn1)c2cc(cnc2)C3=NNC(=O)O3)c4nc(cs4)C(F)(F)F"                                                                                                         
1YP SMILES           "OpenEye OEToolkits" 1.7.6 "CCNC(=O)Nc1cc(c(cn1)c2cc(cnc2)C3=NNC(=O)O3)c4nc(cs4)C(F)(F)F"                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1YP "SYSTEMATIC NAME" ACDLabs              12.01 "1-ethyl-3-{5'-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]-3,3'-bipyridin-6-yl}urea"         
1YP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-ethyl-3-[5-[5-(2-oxidanylidene-3H-1,3,4-oxadiazol-5-yl)pyridin-3-yl]-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]pyridin-2-yl]urea" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1YP "Create component" 2013-08-06 RCSB 
1YP "Initial release"  2013-10-30 RCSB 
# 
