data_1RP
# 
_chem_comp.id                                    1RP 
_chem_comp.name                                  "6-fluoro-3-oxo-4-(5-O-phosphono-beta-D-ribofuranosyl)-3,4-dihydropyrazine-2-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H13 F N3 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-05-09 
_chem_comp.pdbx_modified_date                    2013-08-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        369.197 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1RP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4KN6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1RP OAG   OAG   O 0 1 N N N 0.804 -26.420 -18.801 -6.086 -0.217 0.212  OAG   1RP 1  
1RP PAX   PAX   P 0 1 N N N 1.219 -24.957 -19.134 -4.819 -1.202 0.340  PAX   1RP 2  
1RP OAH   OAH   O 0 1 N N N 0.026 -24.152 -19.495 -5.042 -2.204 1.580  OAH   1RP 3  
1RP OAC   OAC   O 0 1 N N N 2.193 -24.970 -20.285 -4.675 -1.985 -0.907 OAC   1RP 4  
1RP "O5'" "O5'" O 0 1 N N N 1.935 -24.326 -17.900 -3.486 -0.333 0.585  "O5'" 1RP 5  
1RP "C5'" "C5'" C 0 1 N N N 3.255 -24.649 -17.679 -2.960 0.575  -0.385 "C5'" 1RP 6  
1RP "C4'" "C4'" C 0 1 N N R 3.830 -24.209 -16.441 -1.693 1.232  0.167  "C4'" 1RP 7  
1RP "O4'" "O4'" O 0 1 N N N 4.928 -23.350 -16.675 -0.622 0.267  0.253  "O4'" 1RP 8  
1RP "C3'" "C3'" C 0 1 N N S 2.830 -23.407 -15.702 -1.176 2.309  -0.813 "C3'" 1RP 9  
1RP "O3'" "O3'" O 0 1 N N N 2.436 -24.090 -14.583 -1.596 3.609  -0.396 "O3'" 1RP 10 
1RP "C2'" "C2'" C 0 1 N N R 3.497 -22.192 -15.336 0.362  2.185  -0.729 "C2'" 1RP 11 
1RP "O2'" "O2'" O 0 1 N N N 3.280 -21.907 -14.017 0.938  3.405  -0.258 "O2'" 1RP 12 
1RP "C1'" "C1'" C 0 1 N N R 4.942 -22.476 -15.574 0.592  1.048  0.291  "C1'" 1RP 13 
1RP NAW   NAW   N 0 1 N N N 5.624 -21.257 -15.827 1.739  0.228  -0.109 NAW   1RP 14 
1RP CAQ   CAQ   C 0 1 N N N 5.455 -20.668 -17.022 2.823  0.135  0.691  CAQ   1RP 15 
1RP OAD   OAD   O 0 1 N N N 4.616 -21.266 -17.986 2.865  0.729  1.754  OAD   1RP 16 
1RP CAJ   CAJ   C 0 1 N N N 6.411 -20.712 -14.896 1.720  -0.447 -1.278 CAJ   1RP 17 
1RP CAP   CAP   C 0 1 N N N 7.074 -19.511 -15.163 2.790  -1.219 -1.662 CAP   1RP 18 
1RP FAI   FAI   F 0 1 N N N 7.852 -18.950 -14.273 2.737  -1.882 -2.839 FAI   1RP 19 
1RP NAL   NAL   N 0 1 N N N 6.903 -18.926 -16.360 3.871  -1.329 -0.907 NAL   1RP 20 
1RP CAR   CAR   C 0 1 N N N 6.115 -19.472 -17.289 3.949  -0.696 0.253  CAR   1RP 21 
1RP CAO   CAO   C 0 1 N N N 5.944 -18.766 -18.645 5.153  -0.825 1.095  CAO   1RP 22 
1RP OAB   OAB   O 0 1 N N N 5.130 -19.229 -19.512 5.216  -0.241 2.159  OAB   1RP 23 
1RP NAA   NAA   N 0 1 N N N 6.704 -17.592 -18.914 6.183  -1.591 0.684  NAA   1RP 24 
1RP H1    H1    H 0 1 N N N 1.249 -27.018 -19.390 -6.241 0.329  0.995  H1    1RP 25 
1RP H2    H2    H 0 1 N N N 0.127 -23.813 -20.377 -5.829 -2.760 1.500  H2    1RP 26 
1RP H3    H3    H 0 1 N N N 3.340 -25.745 -17.714 -2.718 0.031  -1.298 H3    1RP 27 
1RP H4    H4    H 0 1 N N N 3.846 -24.209 -18.496 -3.701 1.343  -0.605 H4    1RP 28 
1RP H5    H5    H 0 1 N N N 4.136 -25.073 -15.833 -1.889 1.672  1.144  H5    1RP 29 
1RP H6    H6    H 0 1 N N N 1.974 -23.189 -16.358 -1.521 2.102  -1.826 H6    1RP 30 
1RP H7    H7    H 0 1 N N N 1.794 -23.576 -14.108 -1.299 4.324  -0.975 H7    1RP 31 
1RP H8    H8    H 0 1 N N N 3.172 -21.365 -15.985 0.777  1.918  -1.702 H8    1RP 32 
1RP H9    H9    H 0 1 N N N 3.727 -21.100 -13.789 0.772  4.166  -0.831 H9    1RP 33 
1RP H10   H10   H 0 1 N N N 5.365 -22.975 -14.690 0.748  1.459  1.288  H10   1RP 34 
1RP H11   H11   H 0 1 N N N 6.535 -21.198 -13.939 0.853  -0.379 -1.918 H11   1RP 35 
1RP H14   H14   H 0 1 N N N 6.603 -17.121 -19.790 6.132  -2.058 -0.165 H14   1RP 36 
1RP H15   H15   H 0 1 N N N 7.339 -17.239 -18.227 6.975  -1.677 1.238  H15   1RP 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1RP OAC   PAX   DOUB N N 1  
1RP OAB   CAO   DOUB N N 2  
1RP OAH   PAX   SING N N 3  
1RP PAX   OAG   SING N N 4  
1RP PAX   "O5'" SING N N 5  
1RP NAA   CAO   SING N N 6  
1RP CAO   CAR   SING N N 7  
1RP OAD   CAQ   DOUB N N 8  
1RP "O5'" "C5'" SING N N 9  
1RP "C5'" "C4'" SING N N 10 
1RP CAR   CAQ   SING N N 11 
1RP CAR   NAL   DOUB N N 12 
1RP CAQ   NAW   SING N N 13 
1RP "O4'" "C4'" SING N N 14 
1RP "O4'" "C1'" SING N N 15 
1RP "C4'" "C3'" SING N N 16 
1RP NAL   CAP   SING N N 17 
1RP NAW   "C1'" SING N N 18 
1RP NAW   CAJ   SING N N 19 
1RP "C3'" "C2'" SING N N 20 
1RP "C3'" "O3'" SING N N 21 
1RP "C1'" "C2'" SING N N 22 
1RP "C2'" "O2'" SING N N 23 
1RP CAP   CAJ   DOUB N N 24 
1RP CAP   FAI   SING N N 25 
1RP OAG   H1    SING N N 26 
1RP OAH   H2    SING N N 27 
1RP "C5'" H3    SING N N 28 
1RP "C5'" H4    SING N N 29 
1RP "C4'" H5    SING N N 30 
1RP "C3'" H6    SING N N 31 
1RP "O3'" H7    SING N N 32 
1RP "C2'" H8    SING N N 33 
1RP "O2'" H9    SING N N 34 
1RP "C1'" H10   SING N N 35 
1RP CAJ   H11   SING N N 36 
1RP NAA   H14   SING N N 37 
1RP NAA   H15   SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1RP SMILES           ACDLabs              12.01 "O=P(O)(O)OCC2OC(N1C(=O)C(=NC(F)=C1)C(=O)N)C(O)C2O"                                                                                                             
1RP InChI            InChI                1.03  "InChI=1S/C10H13FN3O9P/c11-4-1-14(9(18)5(13-4)8(12)17)10-7(16)6(15)3(23-10)2-22-24(19,20)21/h1,3,6-7,10,15-16H,2H2,(H2,12,17)(H2,19,20,21)/t3-,6-,7-,10-/m1/s1" 
1RP InChIKey         InChI                1.03  RWCWUNIDADUVEZ-KAFVXXCXSA-N                                                                                                                                     
1RP SMILES_CANONICAL CACTVS               3.370 "NC(=O)C1=NC(=CN([C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O)C1=O)F"                                                                                           
1RP SMILES           CACTVS               3.370 "NC(=O)C1=NC(=CN([CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O)C1=O)F"                                                                                                 
1RP SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1=C(N=C(C(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)C(=O)N)F"                                                                                         
1RP SMILES           "OpenEye OEToolkits" 1.7.6 "C1=C(N=C(C(=O)N1C2C(C(C(O2)COP(=O)(O)O)O)O)C(=O)N)F"                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1RP "SYSTEMATIC NAME" ACDLabs              12.01 "6-fluoro-3-oxo-4-(5-O-phosphono-beta-D-ribofuranosyl)-3,4-dihydropyrazine-2-carboxamide"                                              
1RP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-5-(3-aminocarbonyl-5-fluoranyl-2-oxidanylidene-pyrazin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1RP "Create component"   2013-05-09 RCSB 
1RP "Other modification" 2013-05-09 RCSB 
1RP "Initial release"    2013-08-14 RCSB 
# 
