data_XEO
# 
_chem_comp.id                                    XEO 
_chem_comp.name                                  "2-{6-chloro-3-[4-(3-methylpyridin-2-yl)piperazine-1-carbonyl]-1H-indol-1-yl}-N,N-dimethylacetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H26 Cl N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-06 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        439.938 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XEO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G66 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XEO C11  C1  C  0 1 Y N N N N N -13.011 8.367  47.452 -1.177 0.988  0.514  C11  XEO 1  
XEO C15  C2  C  0 1 N N N N N N -12.720 11.433 48.743 -4.181 2.260  -0.120 C15  XEO 2  
XEO C18  C3  C  0 1 N N N N N N -13.310 13.408 50.200 -6.123 3.692  0.220  C18  XEO 3  
XEO C19  C4  C  0 1 N N N N N N -11.345 12.049 50.853 -4.806 3.744  -1.949 C19  XEO 4  
XEO C20  C5  C  0 1 Y N N N N N -11.657 2.416  39.950 6.308  -1.446 -1.783 C20  XEO 5  
XEO C22  C6  C  0 1 Y N N N N N -11.523 3.004  42.303 5.219  0.089  -0.448 C22  XEO 6  
XEO C23  C7  C  0 1 Y N N N N N -10.357 2.158  42.443 6.253  1.007  -0.598 C23  XEO 7  
XEO C24  C8  C  0 1 Y N N N N N -9.872  1.462  41.275 7.347  0.667  -1.374 C24  XEO 8  
XEO C25  C9  C  0 1 Y N N N N N -10.515 1.592  40.024 7.369  -0.584 -1.975 C25  XEO 9  
XEO C27  C10 C  0 1 N N N N N N -11.290 4.910  43.639 2.896  0.488  -0.490 C27  XEO 10 
XEO C28  C11 C  0 1 N N N N N N -11.674 5.435  45.010 1.742  1.026  0.361  C28  XEO 11 
XEO N1   N1  N  0 1 N N N N N N -13.140 5.541  45.185 1.629  0.199  1.572  N1   XEO 12 
XEO C2   C12 C  0 1 N N N N N N -13.802 6.641  45.825 0.447  -0.335 1.938  C2   XEO 13 
XEO O3   O1  O  0 1 N N N N N N -14.991 6.627  46.035 0.355  -0.951 2.983  O3   XEO 14 
XEO C4   C13 C  0 1 Y N N N N N -10.964 9.358  43.374 -2.764 -3.330 0.306  C4   XEO 15 
XEO C5   C14 C  0 1 Y N N N N N -10.452 10.375 44.191 -3.706 -2.705 -0.499 C5   XEO 16 
XEO C6   C15 C  0 1 Y N N N N N -10.743 10.530 45.532 -3.637 -1.349 -0.738 C6   XEO 17 
XEO C7   C16 C  0 1 Y N N N N N -11.868 8.411  43.941 -1.745 -2.600 0.879  C7   XEO 18 
XEO C8   C17 C  0 1 Y N N N N N -12.197 8.534  45.312 -1.663 -1.230 0.645  C8   XEO 19 
XEO C9   C18 C  0 1 Y N N N N N -11.653 9.598  46.071 -2.615 -0.596 -0.170 C9   XEO 20 
XEO N10  N2  N  0 1 Y N N N N N -12.167 9.474  47.371 -2.289 0.744  -0.221 N10  XEO 21 
XEO C12  C19 C  0 1 Y N N N N N -13.046 7.788  46.234 -0.731 -0.172 1.075  C12  XEO 22 
XEO CL13 CL1 CL 0 0 N N N N N N -9.306  11.519 43.515 -4.983 -3.640 -1.213 CL13 XEO 23 
XEO C14  C20 C  0 1 N N N N N N -11.800 10.291 48.499 -3.039 1.759  -0.965 C14  XEO 24 
XEO N16  N3  N  0 1 N N N N N N -12.447 12.254 49.898 -5.012 3.205  -0.602 N16  XEO 25 
XEO O17  O2  O  0 1 N N N N N N -13.632 11.618 47.966 -4.352 1.814  0.995  O17  XEO 26 
XEO N21  N4  N  0 1 Y N N N N N -12.152 3.101  41.018 5.277  -1.095 -1.038 N21  XEO 27 
XEO N26  N5  N  0 1 N N N N N N -12.025 3.675  43.327 4.114  0.417  0.329  N26  XEO 28 
XEO C29  C21 C  0 1 N N N N N N -13.920 4.360  44.738 2.841  -0.032 2.373  C29  XEO 29 
XEO C30  C22 C  0 1 N N N N N N -13.473 3.933  43.339 3.953  -0.528 1.442  C30  XEO 30 
XEO C31  C23 C  0 1 N N N N N N -9.632  1.986  43.742 6.183  2.353  0.075  C31  XEO 31 
XEO H35  H1  H  0 1 N N N N N N -13.541 8.033  48.332 -0.712 1.956  0.635  H35  XEO 32 
XEO H38  H2  H  0 1 N N N N N N -12.949 13.908 51.111 -5.790 4.546  0.811  H38  XEO 33 
XEO H39  H3  H  0 1 N N N N N N -13.284 14.115 49.358 -6.947 3.996  -0.426 H39  XEO 34 
XEO H40  H4  H  0 1 N N N N N N -14.342 13.062 50.357 -6.458 2.897  0.886  H40  XEO 35 
XEO H41  H5  H  0 1 N N N N N N -11.384 12.826 51.631 -5.363 3.145  -2.669 H41  XEO 36 
XEO H43  H6  H  0 1 N N N N N N -11.444 11.058 51.320 -5.157 4.775  -1.985 H43  XEO 37 
XEO H42  H7  H  0 1 N N N N N N -10.384 12.109 50.322 -3.744 3.713  -2.193 H42  XEO 38 
XEO H44  H8  H  0 1 N N N N N N -12.164 2.508  39.001 6.319  -2.418 -2.254 H44  XEO 39 
XEO H45  H9  H  0 1 N N N N N N -9.001  0.830  41.359 8.164  1.359  -1.509 H45  XEO 40 
XEO H46  H10 H  0 1 N N N N N N -10.143 1.076  39.151 8.209  -0.880 -2.587 H46  XEO 41 
XEO H47  H11 H  0 1 N N N N N N -10.210 4.701  43.623 2.645  -0.508 -0.856 H47  XEO 42 
XEO H48  H12 H  0 1 N N N N N N -11.527 5.672  42.882 3.065  1.154  -1.337 H48  XEO 43 
XEO H50  H13 H  0 1 N N N N N N -11.230 6.432  45.143 1.944  2.060  0.642  H50  XEO 44 
XEO H49  H14 H  0 1 N N N N N N -11.276 4.751  45.774 0.813  0.976  -0.207 H49  XEO 45 
XEO H32  H15 H  0 1 N N N N N N -10.679 9.292  42.334 -2.830 -4.393 0.486  H32  XEO 46 
XEO H33  H16 H  0 1 N N N N N N -10.302 11.314 46.129 -4.374 -0.872 -1.367 H33  XEO 47 
XEO H34  H17 H  0 1 N N N N N N -12.291 7.620  43.339 -1.013 -3.089 1.505  H34  XEO 48 
XEO H36  H18 H  0 1 N N N N N N -11.791 9.656  49.397 -3.431 1.321  -1.883 H36  XEO 49 
XEO H37  H19 H  0 1 N N N N N N -10.791 10.691 48.322 -2.378 2.590  -1.213 H37  XEO 50 
XEO H51  H20 H  0 1 N N N N N N -13.758 3.530  45.441 3.150  0.900  2.847  H51  XEO 51 
XEO H52  H21 H  0 1 N N N N N N -14.989 4.618  44.715 2.639  -0.784 3.135  H52  XEO 52 
XEO H54  H22 H  0 1 N N N N N N -13.706 4.735  42.622 3.687  -1.510 1.050  H54  XEO 53 
XEO H53  H23 H  0 1 N N N N N N -14.008 3.016  43.050 4.888  -0.599 1.997  H53  XEO 54 
XEO H57  H24 H  0 1 N N N N N N -10.063 1.137  44.293 6.706  2.310  1.030  H57  XEO 55 
XEO H55  H25 H  0 1 N N N N N N -8.567  1.793  43.545 6.652  3.103  -0.562 H55  XEO 56 
XEO H56  H26 H  0 1 N N N N N N -9.733  2.902  44.342 5.140  2.621  0.244  H56  XEO 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XEO N1  C29  SING N N 1  
XEO N1  C2   SING N N 2  
XEO N1  C28  SING N N 3  
XEO C2  O3   DOUB N N 4  
XEO C2  C12  SING N N 5  
XEO C4  C5   DOUB Y N 6  
XEO C4  C7   SING Y N 7  
XEO C5  C6   SING Y N 8  
XEO C5  CL13 SING N N 9  
XEO C6  C9   DOUB Y N 10 
XEO C7  C8   DOUB Y N 11 
XEO C8  C9   SING Y N 12 
XEO C8  C12  SING Y N 13 
XEO C9  N10  SING Y N 14 
XEO N10 C11  SING Y N 15 
XEO N10 C14  SING N N 16 
XEO C11 C12  DOUB Y N 17 
XEO C14 C15  SING N N 18 
XEO C15 N16  SING N N 19 
XEO C15 O17  DOUB N N 20 
XEO N16 C18  SING N N 21 
XEO N16 C19  SING N N 22 
XEO C20 N21  DOUB Y N 23 
XEO C20 C25  SING Y N 24 
XEO N21 C22  SING Y N 25 
XEO C22 C23  DOUB Y N 26 
XEO C22 N26  SING N N 27 
XEO C23 C24  SING Y N 28 
XEO C23 C31  SING N N 29 
XEO C24 C25  DOUB Y N 30 
XEO N26 C27  SING N N 31 
XEO N26 C30  SING N N 32 
XEO C27 C28  SING N N 33 
XEO C29 C30  SING N N 34 
XEO C11 H35  SING N N 35 
XEO C18 H38  SING N N 36 
XEO C18 H39  SING N N 37 
XEO C18 H40  SING N N 38 
XEO C19 H41  SING N N 39 
XEO C19 H43  SING N N 40 
XEO C19 H42  SING N N 41 
XEO C20 H44  SING N N 42 
XEO C24 H45  SING N N 43 
XEO C25 H46  SING N N 44 
XEO C27 H47  SING N N 45 
XEO C27 H48  SING N N 46 
XEO C28 H50  SING N N 47 
XEO C28 H49  SING N N 48 
XEO C4  H32  SING N N 49 
XEO C6  H33  SING N N 50 
XEO C7  H34  SING N N 51 
XEO C14 H36  SING N N 52 
XEO C14 H37  SING N N 53 
XEO C29 H51  SING N N 54 
XEO C29 H52  SING N N 55 
XEO C30 H54  SING N N 56 
XEO C30 H53  SING N N 57 
XEO C31 H57  SING N N 58 
XEO C31 H55  SING N N 59 
XEO C31 H56  SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XEO SMILES           ACDLabs              12.01 "O=C(c1cn(CC(=O)N(C)C)c2cc(Cl)ccc21)N1CCN(CC1)c1ncccc1C"                                                                                             
XEO InChI            InChI                1.06  "InChI=1S/C23H26ClN5O2/c1-16-5-4-8-25-22(16)27-9-11-28(12-10-27)23(31)19-14-29(15-21(30)26(2)3)20-13-17(24)6-7-18(19)20/h4-8,13-14H,9-12,15H2,1-3H3" 
XEO InChIKey         InChI                1.06  IJIUUNBTVRTNNP-UHFFFAOYSA-N                                                                                                                          
XEO SMILES_CANONICAL CACTVS               3.385 "CN(C)C(=O)Cn1cc(C(=O)N2CCN(CC2)c3ncccc3C)c4ccc(Cl)cc14"                                                                                             
XEO SMILES           CACTVS               3.385 "CN(C)C(=O)Cn1cc(C(=O)N2CCN(CC2)c3ncccc3C)c4ccc(Cl)cc14"                                                                                             
XEO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cccnc1N2CCN(CC2)C(=O)c3cn(c4c3ccc(c4)Cl)CC(=O)N(C)C"                                                                                             
XEO SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cccnc1N2CCN(CC2)C(=O)c3cn(c4c3ccc(c4)Cl)CC(=O)N(C)C"                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XEO "SYSTEMATIC NAME" ACDLabs              12.01 "2-{6-chloro-3-[4-(3-methylpyridin-2-yl)piperazine-1-carbonyl]-1H-indol-1-yl}-N,N-dimethylacetamide"          
XEO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[6-chloranyl-3-[4-(3-methylpyridin-2-yl)piperazin-1-yl]carbonyl-indol-1-yl]-~{N},~{N}-dimethyl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XEO "Create component" 2023-06-06 RCSB 
XEO "Initial release"  2024-12-18 RCSB 
# 
