data_WFO
# 
_chem_comp.id                                    WFO 
_chem_comp.name                                  "(2S)-2-(6-methyl-4-oxo-5-phenylthieno[2,3-d]pyrimidin-3(4H)-yl)butanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H16 N2 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-12 
_chem_comp.pdbx_modified_date                    2025-07-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        328.386 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WFO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FZF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WFO C10 C1  C 0 1 N N S N N N 7.764  8.610  18.158 2.960  0.869  0.132  C10 WFO 1  
WFO C11 C2  C 0 1 N N N N N N 6.957  8.900  16.933 3.855  0.667  -1.063 C11 WFO 2  
WFO O12 O1  O 0 1 N N N N N N 4.954  7.461  18.451 0.315  1.433  0.026  O12 WFO 3  
WFO C13 C3  C 0 1 Y N N N N N 2.754  6.418  20.370 -2.537 0.708  -0.060 C13 WFO 4  
WFO O14 O2  O 0 1 N N N N N N 6.980  10.043 16.450 4.905  1.480  -1.260 O14 WFO 5  
WFO C16 C4  C 0 1 N N N N N N 2.714  6.463  23.509 -4.029 -1.881 -0.034 C16 WFO 6  
WFO C17 C5  C 0 1 N N N N N N 8.699  7.424  17.871 3.782  0.728  1.415  C17 WFO 7  
WFO C18 C6  C 0 1 Y N N N N N 2.017  7.239  19.530 -2.437 1.598  1.008  C18 WFO 8  
WFO C19 C7  C 0 1 Y N N N N N 2.414  5.070  20.458 -3.272 1.064  -1.190 C19 WFO 9  
WFO C20 C8  C 0 1 N N N N N N 8.058  6.113  17.485 2.902  1.055  2.623  C20 WFO 10 
WFO C21 C9  C 0 1 Y N N N N N 0.968  6.696  18.801 -3.064 2.826  0.942  C21 WFO 11 
WFO C22 C10 C 0 1 Y N N N N N 1.367  4.518  19.710 -3.900 2.292  -1.243 C22 WFO 12 
WFO C23 C11 C 0 1 Y N N N N N 0.644  5.344  18.879 -3.792 3.173  -0.182 C23 WFO 13 
WFO C1  C12 C 0 1 Y N N N N N 5.181  7.568  20.792 -0.412 -0.751 0.056  C1  WFO 14 
WFO C2  C13 C 0 1 Y N N N N N 5.932  7.887  22.000 -0.016 -2.082 0.110  C2  WFO 15 
WFO C3  C14 C 0 1 N N N N N N 5.662  7.757  19.424 0.606  0.250  0.066  C3  WFO 16 
WFO N4  N1  N 0 1 N N N N N N 6.979  8.346  19.345 1.895  -0.138 0.121  N4  WFO 17 
WFO N5  N2  N 0 1 N N N N N N 7.205  8.495  21.819 1.300  -2.382 0.164  N5  WFO 18 
WFO C6  C15 C 0 1 Y N N N N N 3.869  6.946  21.243 -1.861 -0.609 0.002  C6  WFO 19 
WFO S7  S1  S 0 1 Y N N N N N 5.188  7.589  23.330 -1.429 -3.128 0.093  S7  WFO 20 
WFO C8  C16 C 0 1 Y N N N N N 3.846  6.953  22.687 -2.527 -1.764 0.014  C8  WFO 21 
WFO C9  C17 C 0 1 N N N N N N 7.716  8.671  20.496 2.213  -1.457 0.166  C9  WFO 22 
WFO O15 O3  O 0 1 N N N N N N 6.287  7.998  16.397 3.627  -0.226 -1.844 O15 WFO 23 
WFO H1  H1  H 0 1 N N N N N N 8.401  9.486  18.353 2.518  1.865  0.091  H1  WFO 24 
WFO H2  H2  H 0 1 N N N N N N 6.436  10.070 15.672 5.451  1.311  -2.040 H2  WFO 25 
WFO H3  H3  H 0 1 N N N N N N 2.946  6.605  24.575 -4.356 -1.940 -1.072 H3  WFO 26 
WFO H4  H4  H 0 1 N N N N N N 1.804  7.026  23.253 -4.340 -2.780 0.497  H4  WFO 27 
WFO H5  H5  H 0 1 N N N N N N 2.552  5.394  23.309 -4.477 -1.007 0.439  H5  WFO 28 
WFO H6  H6  H 0 1 N N N N N N 9.294  7.246  18.779 4.150  -0.294 1.500  H6  WFO 29 
WFO H7  H7  H 0 1 N N N N N N 9.365  7.721  17.048 4.626  1.416  1.383  H7  WFO 30 
WFO H8  H8  H 0 1 N N N N N N 2.256  8.289  19.444 -1.869 1.327  1.886  H8  WFO 31 
WFO H9  H9  H 0 1 N N N N N N 2.975  4.431  21.124 -3.350 0.381  -2.023 H9  WFO 32 
WFO H10 H10 H 0 1 N N N N N N 8.840  5.359  17.310 2.534  2.078  2.538  H10 WFO 33 
WFO H11 H11 H 0 1 N N N N N N 7.398  5.775  18.297 2.058  0.367  2.655  H11 WFO 34 
WFO H12 H12 H 0 1 N N N N N N 7.469  6.250  16.566 3.488  0.955  3.537  H12 WFO 35 
WFO H13 H13 H 0 1 N N N N N N 0.388  7.339  18.156 -2.983 3.517  1.767  H13 WFO 36 
WFO H14 H14 H 0 1 N N N N N N 1.132  3.467  19.783 -4.469 2.569  -2.118 H14 WFO 37 
WFO H15 H15 H 0 1 N N N N N N -0.170 4.946  18.291 -4.281 4.135  -0.229 H15 WFO 38 
WFO H16 H16 H 0 1 N N N N N N 8.712  9.071  20.376 3.253  -1.745 0.209  H16 WFO 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WFO O15 C11 DOUB N N 1  
WFO O14 C11 SING N N 2  
WFO C11 C10 SING N N 3  
WFO C20 C17 SING N N 4  
WFO C17 C10 SING N N 5  
WFO C10 N4  SING N N 6  
WFO O12 C3  DOUB N N 7  
WFO C21 C23 DOUB Y N 8  
WFO C21 C18 SING Y N 9  
WFO C23 C22 SING Y N 10 
WFO N4  C3  SING N N 11 
WFO N4  C9  SING N N 12 
WFO C3  C1  SING N N 13 
WFO C18 C13 DOUB Y N 14 
WFO C22 C19 DOUB Y N 15 
WFO C13 C19 SING Y N 16 
WFO C13 C6  SING N N 17 
WFO C9  N5  DOUB N N 18 
WFO C1  C6  SING Y N 19 
WFO C1  C2  DOUB Y N 20 
WFO C6  C8  DOUB Y N 21 
WFO N5  C2  SING N N 22 
WFO C2  S7  SING Y N 23 
WFO C8  S7  SING Y N 24 
WFO C8  C16 SING N N 25 
WFO C10 H1  SING N N 26 
WFO O14 H2  SING N N 27 
WFO C16 H3  SING N N 28 
WFO C16 H4  SING N N 29 
WFO C16 H5  SING N N 30 
WFO C17 H6  SING N N 31 
WFO C17 H7  SING N N 32 
WFO C18 H8  SING N N 33 
WFO C19 H9  SING N N 34 
WFO C20 H10 SING N N 35 
WFO C20 H11 SING N N 36 
WFO C20 H12 SING N N 37 
WFO C21 H13 SING N N 38 
WFO C22 H14 SING N N 39 
WFO C23 H15 SING N N 40 
WFO C9  H16 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WFO SMILES           ACDLabs              14.52   "O=C(O)C(CC)N1C=Nc2sc(C)c(c2C1=O)c1ccccc1"                                                                                           
WFO InChI            InChI                1.06    "InChI=1S/C17H16N2O3S/c1-3-12(17(21)22)19-9-18-15-14(16(19)20)13(10(2)23-15)11-7-5-4-6-8-11/h4-9,12H,3H2,1-2H3,(H,21,22)/t12-/m0/s1" 
WFO InChIKey         InChI                1.06    LGPFPZPACCUANZ-LBPRGKRZSA-N                                                                                                          
WFO SMILES_CANONICAL CACTVS               3.385   "CC[C@H](N1C=Nc2sc(C)c(c3ccccc3)c2C1=O)C(O)=O"                                                                                       
WFO SMILES           CACTVS               3.385   "CC[CH](N1C=Nc2sc(C)c(c3ccccc3)c2C1=O)C(O)=O"                                                                                        
WFO SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC[C@@H](C(=O)O)N1C=Nc2c(c(c(s2)C)c3ccccc3)C1=O"                                                                                    
WFO SMILES           "OpenEye OEToolkits" 3.1.0.0 "CCC(C(=O)O)N1C=Nc2c(c(c(s2)C)c3ccccc3)C1=O"                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WFO "SYSTEMATIC NAME" ACDLabs              14.52   "(2S)-2-(6-methyl-4-oxo-5-phenylthieno[2,3-d]pyrimidin-3(4H)-yl)butanoic acid"           
WFO "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{S})-2-(6-methyl-4-oxidanylidene-5-phenyl-thieno[2,3-d]pyrimidin-3-yl)butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WFO "Create component"   2023-05-12 RCSB 
WFO "Initial release"    2023-06-14 RCSB 
WFO "Other modification" 2025-07-25 RCSB 
# 
