data_8BO
#

_chem_comp.id                                   8BO
_chem_comp.name                                 "(1~{R},3~{R})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R},6~{S})-6-(4-hydroxyphenyl)-6-methoxy-hexan-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C32 H46 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "25RS-(hydroxyphenyl)-25-methoxy-2-methylidene-19,26,27-trinor-1-hydroxyvitamin D3"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-06-07
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       494.705
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8BO
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5XPN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8BO  O36  O1   O  0  1  N  N  N   8.164  -2.160  32.047  -10.587  -2.549   1.219  O36  8BO   1  
8BO  C33  C1   C  0  1  Y  N  N   8.394  -1.608  30.814   -9.471  -1.979   0.691  C33  8BO   2  
8BO  C32  C2   C  0  1  Y  N  N   9.058  -2.319  29.805   -8.475  -2.776   0.146  C32  8BO   3  
8BO  C31  C3   C  0  1  Y  N  N   9.262  -1.722  28.559   -7.342  -2.194  -0.389  C31  8BO   4  
8BO  C34  C4   C  0  1  Y  N  N   7.943  -0.315  30.558   -9.330  -0.599   0.692  C34  8BO   5  
8BO  C35  C5   C  0  1  Y  N  N   8.145   0.281  29.318   -8.195  -0.022   0.155  C35  8BO   6  
8BO  C30  C6   C  0  1  Y  N  N   8.814  -0.423  28.323   -7.201  -0.818  -0.382  C30  8BO   7  
8BO  C27  C7   C  0  1  N  N  S   9.013   0.245  27.018   -5.964  -0.186  -0.966  C27  8BO   8  
8BO  O28  O2   O  0  1  N  N  N   7.767   0.154  26.343   -6.311   1.053  -1.588  O28  8BO   9  
8BO  C29  C8   C  0  1  N  N  N   7.823  -0.735  25.230   -6.664   0.933  -2.967  C29  8BO  10  
8BO  C26  C9   C  0  1  N  N  N   9.347   1.733  27.194   -4.947   0.069   0.148  C26  8BO  11  
8BO  C25  C10  C  0  1  N  N  N  10.670   2.023  27.905   -3.645   0.595  -0.461  C25  8BO  12  
8BO  C24  C11  C  0  1  N  N  N  11.911   1.928  27.007   -2.628   0.850   0.653  C24  8BO  13  
8BO  C21  C12  C  0  1  N  N  R  13.113   2.495  27.774   -1.326   1.375   0.045  C21  8BO  14  
8BO  C22  C13  C  0  1  N  N  N  13.796   1.467  28.663   -1.577   2.742  -0.595  C22  8BO  15  
8BO  C20  C14  C  0  1  N  N  R  14.216   3.189  26.965   -0.269   1.512   1.142  C20  8BO  16  
8BO  C16  C15  C  0  1  N  N  R  13.810   4.511  26.328    1.045   2.000   0.552  C16  8BO  17  
8BO  C23  C16  C  0  1  N  N  N  12.721   4.326  25.266    1.207   1.432  -0.859  C23  8BO  18  
8BO  C15  C17  C  0  1  N  N  N  13.416   5.661  27.260    1.311   3.487   0.525  C15  8BO  19  
8BO  C14  C18  C  0  1  N  N  N  13.465   7.012  26.518    2.641   3.707  -0.215  C14  8BO  20  
8BO  C13  C19  C  0  1  N  N  N  14.810   7.261  25.812    3.797   2.980   0.469  C13  8BO  21  
8BO  C19  C20  C  0  1  N  N  N  14.928   2.427  25.837    0.053   0.124   1.756  C19  8BO  22  
8BO  C18  C21  C  0  1  N  N  N  15.689   3.529  25.090    1.584  -0.087   1.579  C18  8BO  23  
8BO  C17  C22  C  0  1  N  N  S  15.168   4.816  25.731    2.113   1.348   1.475  C17  8BO  24  
8BO  C12  C23  C  0  1  N  N  N  15.040   6.062  24.914    3.423   1.536   0.769  C12  8BO  25  
8BO  C11  C24  C  0  1  N  N  N  15.103   6.076  23.563    4.201   0.514   0.429  C11  8BO  26  
8BO  C10  C25  C  0  1  N  N  N  14.929   7.297  22.778    5.476   0.758  -0.263  C10  8BO  27  
8BO  C4   C26  C  0  1  N  N  N  14.761   7.351  21.434    6.202  -0.266  -0.700  C4   8BO  28  
8BO  C3   C27  C  0  1  N  N  N  14.531   8.723  20.827    7.574  -0.038  -1.293  C3   8BO  29  
8BO  C2   C28  C  0  1  N  N  R  15.161   8.853  19.438    8.587  -0.896  -0.525  C2   8BO  30  
8BO  O9   O3   O  0  1  N  N  N  16.599   8.839  19.480    8.763  -0.367   0.791  O9   8BO  31  
8BO  C5   C29  C  0  1  N  N  N  14.740   6.114  20.563    5.673  -1.679  -0.607  C5   8BO  32  
8BO  C6   C30  C  0  1  N  N  R  15.105   6.334  19.089    6.690  -2.533   0.160  C6   8BO  33  
8BO  O8   O4   O  0  1  N  N  N  14.464   5.319  18.322    6.339  -3.913   0.049  O8   8BO  34  
8BO  C1   C31  C  0  1  N  N  N  14.700   7.692  18.595    8.056  -2.308  -0.437  C1   8BO  35  
8BO  C7   C32  C  0  1  N  N  N  13.986   7.856  17.491    8.769  -3.319  -0.867  C7   8BO  36  
8BO  H1   H1   H  0  1  N  N  N   7.705  -1.534  32.594  -10.514  -2.758   2.160  H1   8BO  37  
8BO  H2   H2   H  0  1  N  N  N   9.410  -3.323  29.990   -8.585  -3.850   0.140  H2   8BO  38  
8BO  H3   H3   H  0  1  N  N  N   9.768  -2.268  27.776   -6.566  -2.813  -0.814  H3   8BO  39  
8BO  H4   H4   H  0  1  N  N  N   7.429   0.233  31.334  -10.106   0.024   1.112  H4   8BO  40  
8BO  H5   H5   H  0  1  N  N  N   7.785   1.282  29.129   -8.084   1.053   0.155  H5   8BO  41  
8BO  H6   H6   H  0  1  N  N  N   9.814  -0.251  26.450   -5.530  -0.856  -1.709  H6   8BO  42  
8BO  H7   H7   H  0  1  N  N  N   6.839  -0.773  24.740   -6.914   1.916  -3.365  H7   8BO  43  
8BO  H8   H8   H  0  1  N  N  N   8.576  -0.377  24.512   -5.824   0.518  -3.523  H8   8BO  44  
8BO  H9   H9   H  0  1  N  N  N   8.098  -1.741  25.578   -7.526   0.272  -3.065  H9   8BO  45  
8BO  H10  H10  H  0  1  N  N  N   9.389   2.193  26.196   -5.347   0.807   0.843  H10  8BO  46  
8BO  H11  H11  H  0  1  N  N  N   8.538   2.197  27.778   -4.749  -0.862   0.679  H11  8BO  47  
8BO  H12  H12  H  0  1  N  N  N  10.784   1.300  28.726   -3.245  -0.144  -1.156  H12  8BO  48  
8BO  H13  H13  H  0  1  N  N  N  10.622   3.042  28.318   -3.842   1.525  -0.993  H13  8BO  49  
8BO  H14  H14  H  0  1  N  N  N  11.749   2.510  26.088   -3.028   1.588   1.349  H14  8BO  50  
8BO  H15  H15  H  0  1  N  N  N  12.100   0.876  26.746   -2.431  -0.081   1.185  H15  8BO  51  
8BO  H16  H16  H  0  1  N  N  N  12.706   3.261  28.450   -0.973   0.678  -0.715  H16  8BO  52  
8BO  H17  H17  H  0  1  N  N  N  13.040   0.942  29.265   -1.931   3.439   0.165  H17  8BO  53  
8BO  H18  H18  H  0  1  N  N  N  14.335   0.741  28.037   -0.650   3.117  -1.028  H18  8BO  54  
8BO  H19  H19  H  0  1  N  N  N  14.508   1.975  29.331   -2.331   2.645  -1.377  H19  8BO  55  
8BO  H20  H20  H  0  1  N  N  N  15.002   3.439  27.693   -0.614   2.197   1.916  H20  8BO  56  
8BO  H21  H21  H  0  1  N  N  N  11.762   4.108  25.758    0.462   1.879  -1.518  H21  8BO  57  
8BO  H22  H22  H  0  1  N  N  N  12.627   5.247  24.673    2.205   1.661  -1.231  H22  8BO  58  
8BO  H23  H23  H  0  1  N  N  N  12.992   3.490  24.605    1.068   0.351  -0.834  H23  8BO  59  
8BO  H24  H24  H  0  1  N  N  N  12.394   5.490  27.631    0.505   3.997  -0.002  H24  8BO  60  
8BO  H25  H25  H  0  1  N  N  N  14.114   5.691  28.110    1.385   3.868   1.544  H25  8BO  61  
8BO  H26  H26  H  0  1  N  N  N  13.297   7.819  27.247    2.544   3.339  -1.236  H26  8BO  62  
8BO  H27  H27  H  0  1  N  N  N  12.665   7.027  25.763    2.860   4.775  -0.242  H27  8BO  63  
8BO  H28  H28  H  0  1  N  N  N  15.620   7.345  26.552    4.668   2.997  -0.185  H28  8BO  64  
8BO  H29  H29  H  0  1  N  N  N  14.762   8.183  25.214    4.039   3.489   1.402  H29  8BO  65  
8BO  H30  H30  H  0  1  N  N  N  14.201   1.933  25.176   -0.206   0.114   2.815  H30  8BO  66  
8BO  H31  H31  H  0  1  N  N  N  15.621   1.677  26.245   -0.497  -0.655   1.229  H31  8BO  67  
8BO  H32  H32  H  0  1  N  N  N  15.461   3.505  24.014    2.008  -0.594   2.445  H32  8BO  68  
8BO  H33  H33  H  0  1  N  N  N  16.774   3.427  25.237    1.793  -0.643   0.664  H33  8BO  69  
8BO  H34  H34  H  0  1  N  N  N  15.841   5.047  26.570    2.124   1.827   2.454  H34  8BO  70  
8BO  H35  H35  H  0  1  N  N  N  15.289   5.148  23.043    3.898  -0.496   0.661  H35  8BO  71  
8BO  H36  H36  H  0  1  N  N  N  14.935   8.235  23.314    5.822   1.770  -0.417  H36  8BO  72  
8BO  H37  H37  H  0  1  N  N  N  14.973   9.482  21.489    7.571  -0.328  -2.344  H37  8BO  73  
8BO  H38  H38  H  0  1  N  N  N  13.448   8.896  20.743    7.840   1.015  -1.205  H38  8BO  74  
8BO  H39  H39  H  0  1  N  N  N  14.810   9.789  18.979    9.542  -0.893  -1.050  H39  8BO  75  
8BO  H40  H40  H  0  1  N  N  N  16.908   9.566  20.008    9.392  -0.863   1.334  H40  8BO  76  
8BO  H41  H41  H  0  1  N  N  N  13.725   5.691  20.601    4.721  -1.679  -0.076  H41  8BO  77  
8BO  H42  H42  H  0  1  N  N  N  15.454   5.391  20.984    5.533  -2.084  -1.609  H42  8BO  78  
8BO  H43  H43  H  0  1  N  N  N  16.196   6.237  18.989    6.697  -2.240   1.210  H43  8BO  79  
8BO  H44  H44  H  0  1  N  N  N  14.728   4.465  18.643    6.941  -4.511   0.512  H44  8BO  80  
8BO  H45  H45  H  0  1  N  N  N  13.714   8.850  17.166    8.381  -4.324  -0.794  H45  8BO  81  
8BO  H46  H46  H  0  1  N  N  N  13.676   6.996  16.916    9.747  -3.148  -1.293  H46  8BO  82  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8BO  C7   C1   DOUB  N  N   1  
8BO  O8   C6   SING  N  N   2  
8BO  C1   C6   SING  N  N   3  
8BO  C1   C2   SING  N  N   4  
8BO  C6   C5   SING  N  N   5  
8BO  C2   O9   SING  N  N   6  
8BO  C2   C3   SING  N  N   7  
8BO  C5   C4   SING  N  N   8  
8BO  C3   C4   SING  N  N   9  
8BO  C4   C10  DOUB  N  N  10  
8BO  C10  C11  SING  N  N  11  
8BO  C11  C12  DOUB  N  E  12  
8BO  C12  C17  SING  N  N  13  
8BO  C12  C13  SING  N  N  14  
8BO  C18  C17  SING  N  N  15  
8BO  C18  C19  SING  N  N  16  
8BO  C29  O28  SING  N  N  17  
8BO  C23  C16  SING  N  N  18  
8BO  C17  C16  SING  N  N  19  
8BO  C13  C14  SING  N  N  20  
8BO  C19  C20  SING  N  N  21  
8BO  C16  C20  SING  N  N  22  
8BO  C16  C15  SING  N  N  23  
8BO  O28  C27  SING  N  N  24  
8BO  C14  C15  SING  N  N  25  
8BO  C20  C21  SING  N  N  26  
8BO  C24  C21  SING  N  N  27  
8BO  C24  C25  SING  N  N  28  
8BO  C27  C26  SING  N  N  29  
8BO  C27  C30  SING  N  N  30  
8BO  C26  C25  SING  N  N  31  
8BO  C21  C22  SING  N  N  32  
8BO  C30  C31  DOUB  Y  N  33  
8BO  C30  C35  SING  Y  N  34  
8BO  C31  C32  SING  Y  N  35  
8BO  C35  C34  DOUB  Y  N  36  
8BO  C32  C33  DOUB  Y  N  37  
8BO  C34  C33  SING  Y  N  38  
8BO  C33  O36  SING  N  N  39  
8BO  O36  H1   SING  N  N  40  
8BO  C32  H2   SING  N  N  41  
8BO  C31  H3   SING  N  N  42  
8BO  C34  H4   SING  N  N  43  
8BO  C35  H5   SING  N  N  44  
8BO  C27  H6   SING  N  N  45  
8BO  C29  H7   SING  N  N  46  
8BO  C29  H8   SING  N  N  47  
8BO  C29  H9   SING  N  N  48  
8BO  C26  H10  SING  N  N  49  
8BO  C26  H11  SING  N  N  50  
8BO  C25  H12  SING  N  N  51  
8BO  C25  H13  SING  N  N  52  
8BO  C24  H14  SING  N  N  53  
8BO  C24  H15  SING  N  N  54  
8BO  C21  H16  SING  N  N  55  
8BO  C22  H17  SING  N  N  56  
8BO  C22  H18  SING  N  N  57  
8BO  C22  H19  SING  N  N  58  
8BO  C20  H20  SING  N  N  59  
8BO  C23  H21  SING  N  N  60  
8BO  C23  H22  SING  N  N  61  
8BO  C23  H23  SING  N  N  62  
8BO  C15  H24  SING  N  N  63  
8BO  C15  H25  SING  N  N  64  
8BO  C14  H26  SING  N  N  65  
8BO  C14  H27  SING  N  N  66  
8BO  C13  H28  SING  N  N  67  
8BO  C13  H29  SING  N  N  68  
8BO  C19  H30  SING  N  N  69  
8BO  C19  H31  SING  N  N  70  
8BO  C18  H32  SING  N  N  71  
8BO  C18  H33  SING  N  N  72  
8BO  C17  H34  SING  N  N  73  
8BO  C11  H35  SING  N  N  74  
8BO  C10  H36  SING  N  N  75  
8BO  C3   H37  SING  N  N  76  
8BO  C3   H38  SING  N  N  77  
8BO  C2   H39  SING  N  N  78  
8BO  O9   H40  SING  N  N  79  
8BO  C5   H41  SING  N  N  80  
8BO  C5   H42  SING  N  N  81  
8BO  C6   H43  SING  N  N  82  
8BO  O8   H44  SING  N  N  83  
8BO  C7   H45  SING  N  N  84  
8BO  C7   H46  SING  N  N  85  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8BO  InChI             InChI                 1.03   "InChI=1S/C32H46O4/c1-21(7-5-9-31(36-4)25-12-14-26(33)15-13-25)27-16-17-28-24(8-6-18-32(27,28)3)11-10-23-19-29(34)22(2)30(35)20-23/h10-15,21,27-31,33-35H,2,5-9,16-20H2,1,3-4H3/b24-11+/t21-,27-,28+,29-,30-,31+,32-/m1/s1"  
8BO  InChIKey          InChI                 1.03   LNLTYAYGVNOEBQ-CLQLOTFESA-N  
8BO  SMILES_CANONICAL  CACTVS                3.385  "CO[C@@H](CCC[C@@H](C)[C@H]1CC[C@H]2C(/CCC[C@]12C)=C/C=C3/C[C@@H](O)C(=C)[C@H](O)C3)c4ccc(O)cc4"  
8BO  SMILES            CACTVS                3.385  "CO[CH](CCC[CH](C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C(=C)[CH](O)C3)c4ccc(O)cc4"  
8BO  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@H](CCC[C@@H](c1ccc(cc1)O)OC)[C@H]2CC[C@@H]\3[C@@]2(CCC/C3=C\C=C4C[C@H](C(=C)[C@@H](C4)O)O)C"  
8BO  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(CCCC(c1ccc(cc1)O)OC)C2CCC3C2(CCCC3=CC=C4CC(C(=C)C(C4)O)O)C"  
#
_pdbx_chem_comp_identifier.comp_id          8BO
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(1~{R},3~{R})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R},6~{S})-6-(4-hydroxyphenyl)-6-methoxy-hexan-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8BO  "Create component"  2017-06-07  PDBJ  
8BO  "Initial release"   2018-07-11  RCSB  
8BO  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     8BO
_pdbx_chem_comp_synonyms.name        "25RS-(hydroxyphenyl)-25-methoxy-2-methylidene-19,26,27-trinor-1-hydroxyvitamin D3"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
