data_XRN
# 
_chem_comp.id                                    XRN 
_chem_comp.name                                  "[4-(trifluoromethoxy)phenyl]methyl (3aR,6aS)-5-(4-sulfamoylpiperidine-1-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H27 F3 N4 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-08 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        520.522 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XRN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G32 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XRN C10 C1  C 0 1 Y N N N N N -13.374 3.515  44.678 -5.978  -0.748 1.089  C10 XRN 1  
XRN C11 C2  C 0 1 Y N N N N N -12.531 3.005  43.718 -7.112  0.032  0.971  C11 XRN 2  
XRN C17 C3  C 0 1 N N N N N N -13.056 8.628  47.662 0.545   -2.114 -0.569 C17 XRN 3  
XRN C18 C4  C 0 1 N N N N N N -15.197 9.426  48.626 -0.772  -0.153 -1.075 C18 XRN 4  
XRN C19 C5  C 0 1 N N S N N N -13.966 10.100 49.253 0.642   0.249  -0.712 C19 XRN 5  
XRN C20 C6  C 0 1 N N S N N N -12.944 10.059 48.092 1.373   -1.057 -1.225 C20 XRN 6  
XRN C21 C7  C 0 1 N N N N N N -11.692 10.636 48.744 2.801   -0.687 -0.981 C21 XRN 7  
XRN C23 C8  C 0 1 N N N N N N -13.804 11.558 49.656 1.462   1.260  -1.483 C23 XRN 8  
XRN C26 C9  C 0 1 N N N N N N -11.650 12.497 50.495 3.976   1.537  -1.289 C26 XRN 9  
XRN F1  F1  F 0 1 N N N N N N -9.394  1.687  41.539 -8.290  2.466  1.129  F1  XRN 10 
XRN C2  C10 C 0 1 N N N N N N -10.618 2.190  41.590 -9.323  1.580  0.802  C2  XRN 11 
XRN O3  O1  O 0 1 N N N N N N -10.720 3.481  42.172 -8.943  0.806  -0.337 O3  XRN 12 
XRN F4  F2  F 0 1 N N N N N N -11.018 2.269  40.341 -9.566  0.728  1.885  F4  XRN 13 
XRN F5  F3  F 0 1 N N N N N N -11.430 1.303  42.161 -10.483 2.304  0.508  F5  XRN 14 
XRN C6  C11 C 0 1 Y N N N N N -11.626 3.855  43.127 -7.827  0.039  -0.218 C6  XRN 15 
XRN C7  C12 C 0 1 Y N N N N N -11.547 5.220  43.464 -7.401  -0.738 -1.286 C7  XRN 16 
XRN C8  C13 C 0 1 Y N N N N N -12.408 5.715  44.437 -6.266  -1.517 -1.162 C8  XRN 17 
XRN C9  C14 C 0 1 Y N N N N N -13.330 4.839  45.049 -5.553  -1.518 0.022  C9  XRN 18 
XRN C12 C15 C 0 1 N N N N N N -14.317 5.277  46.112 -4.315  -2.367 0.154  C12 XRN 19 
XRN O13 O2  O 0 1 N N N N N N -13.981 6.571  46.563 -3.155  -1.600 -0.263 O13 XRN 20 
XRN C14 C16 C 0 1 N N N N N N -14.976 7.284  47.217 -1.960  -2.219 -0.205 C14 XRN 21 
XRN O15 O3  O 0 1 N N N N N N -16.102 6.849  47.416 -1.890  -3.368 0.182  O15 XRN 22 
XRN N16 N1  N 0 1 N N N N N N -14.536 8.521  47.618 -0.843  -1.563 -0.577 N16 XRN 23 
XRN N22 N2  N 0 1 N N N N N N -12.300 11.613 49.668 2.862   0.780  -1.254 N22 XRN 24 
XRN N27 N3  N 0 1 N N N N N N -12.291 13.650 50.951 5.188   0.956  -1.182 N27 XRN 25 
XRN O28 O4  O 0 1 N N N N N N -10.494 12.260 50.839 3.889   2.743  -1.416 O28 XRN 26 
XRN C29 C17 C 0 1 N N N N N N -12.846 14.673 50.062 6.408   1.702  -1.520 C29 XRN 27 
XRN C30 C18 C 0 1 N N N N N N -13.995 15.398 50.775 7.373   1.634  -0.332 C30 XRN 28 
XRN C31 C19 C 0 1 N N N N N N -13.498 16.006 52.115 7.615   0.169  0.040  C31 XRN 29 
XRN C32 C20 C 0 1 N N N N N N -12.818 14.925 52.980 6.292   -0.479 0.454  C32 XRN 30 
XRN C33 C21 C 0 1 N N N N N N -11.709 14.247 52.174 5.315   -0.432 -0.719 C33 XRN 31 
XRN S34 S1  S 0 1 N N N N N N -14.806 16.779 52.926 8.789   0.082  1.419  S34 XRN 32 
XRN N35 N4  N 0 1 N N N N N N -15.876 16.987 51.713 8.958   -1.539 1.716  N35 XRN 33 
XRN O36 O5  O 0 1 N N N N N N -15.368 15.872 53.882 10.082  0.498  1.001  O36 XRN 34 
XRN O37 O6  O 0 1 N N N N N N -14.330 18.061 53.328 8.202   0.596  2.607  O37 XRN 35 
XRN H40 H1  H 0 1 N N N N N N -14.089 2.859  45.153 -5.422  -0.754 2.014  H40 XRN 36 
XRN H41 H2  H 0 1 N N N N N N -12.579 1.964  43.436 -7.442  0.636  1.803  H41 XRN 37 
XRN H44 H3  H 0 1 N N N N N N -12.613 7.939  48.397 0.590   -3.041 -1.140 H44 XRN 38 
XRN H45 H4  H 0 1 N N N N N N -12.599 8.455  46.676 0.883   -2.281 0.454  H45 XRN 39 
XRN H47 H5  H 0 1 N N N N N N -15.858 10.159 48.141 -1.498  0.477  -0.560 H47 XRN 40 
XRN H46 H6  H 0 1 N N N N N N -15.769 8.854  49.371 -0.922  -0.111 -2.154 H46 XRN 41 
XRN H25 H7  H 0 1 N N N N N N -13.594 9.463  50.069 0.751   0.378  0.365  H25 XRN 42 
XRN H24 H8  H 0 1 N N N N N N -13.282 10.724 47.284 1.222   -1.116 -2.303 H24 XRN 43 
XRN H48 H9  H 0 1 N N N N N N -11.123 9.865  49.284 3.075   -0.892 0.054  H48 XRN 44 
XRN H49 H10 H 0 1 N N N N N N -11.038 11.125 48.007 3.456   -1.228 -1.664 H49 XRN 45 
XRN H51 H11 H 0 1 N N N N N N -14.239 12.245 48.915 1.212   1.234  -2.543 H51 XRN 46 
XRN H50 H12 H 0 1 N N N N N N -14.235 11.766 50.646 1.322   2.262  -1.078 H50 XRN 47 
XRN H38 H13 H 0 1 N N N N N N -10.833 5.868  42.977 -7.956  -0.735 -2.212 H38 XRN 48 
XRN H39 H14 H 0 1 N N N N N N -12.372 6.756  44.721 -5.934  -2.122 -1.993 H39 XRN 49 
XRN H43 H15 H 0 1 N N N N N N -15.332 5.289  45.687 -4.194  -2.674 1.193  H43 XRN 50 
XRN H42 H16 H 0 1 N N N N N N -14.281 4.574  46.957 -4.412  -3.251 -0.477 H42 XRN 51 
XRN H52 H17 H 0 1 N N N N N N -12.061 15.398 49.801 6.877   1.258  -2.398 H52 XRN 52 
XRN H53 H18 H 0 1 N N N N N N -13.225 14.197 49.146 6.155   2.742  -1.726 H53 XRN 53 
XRN H55 H19 H 0 1 N N N N N N -14.373 16.204 50.128 8.319   2.101  -0.605 H55 XRN 54 
XRN H54 H20 H 0 1 N N N N N N -14.805 14.682 50.979 6.940   2.158  0.519  H54 XRN 55 
XRN H56 H21 H 0 1 N N N N N N -12.760 16.790 51.890 8.025   -0.361 -0.820 H56 XRN 56 
XRN H57 H22 H 0 1 N N N N N N -12.386 15.392 53.877 6.468   -1.515 0.741  H57 XRN 57 
XRN H58 H23 H 0 1 N N N N N N -13.563 14.174 53.281 5.869   0.066  1.298  H58 XRN 58 
XRN H59 H24 H 0 1 N N N N N N -11.242 13.458 52.782 4.341   -0.800 -0.397 H59 XRN 59 
XRN H60 H25 H 0 1 N N N N N N -10.950 14.992 51.894 5.693   -1.055 -1.530 H60 XRN 60 
XRN H62 H26 H 0 1 N N N N N N -16.697 17.437 52.065 9.794   -1.883 2.068  H62 XRN 61 
XRN H61 H27 H 0 1 N N N N N N -15.465 17.555 51.000 8.222   -2.144 1.538  H61 XRN 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XRN F1  C2  SING N N 1  
XRN C2  O3  SING N N 2  
XRN C2  F4  SING N N 3  
XRN C2  F5  SING N N 4  
XRN O3  C6  SING N N 5  
XRN C6  C7  DOUB Y N 6  
XRN C6  C11 SING Y N 7  
XRN C7  C8  SING Y N 8  
XRN C8  C9  DOUB Y N 9  
XRN C9  C10 SING Y N 10 
XRN C9  C12 SING N N 11 
XRN C10 C11 DOUB Y N 12 
XRN C12 O13 SING N N 13 
XRN O13 C14 SING N N 14 
XRN C14 O15 DOUB N N 15 
XRN C14 N16 SING N N 16 
XRN N16 C17 SING N N 17 
XRN N16 C18 SING N N 18 
XRN C17 C20 SING N N 19 
XRN C18 C19 SING N N 20 
XRN C19 C20 SING N N 21 
XRN C19 C23 SING N N 22 
XRN C20 C21 SING N N 23 
XRN C21 N22 SING N N 24 
XRN N22 C23 SING N N 25 
XRN N22 C26 SING N N 26 
XRN C26 N27 SING N N 27 
XRN C26 O28 DOUB N N 28 
XRN N27 C29 SING N N 29 
XRN N27 C33 SING N N 30 
XRN C29 C30 SING N N 31 
XRN C30 C31 SING N N 32 
XRN C31 C32 SING N N 33 
XRN C31 S34 SING N N 34 
XRN C32 C33 SING N N 35 
XRN S34 N35 SING N N 36 
XRN S34 O36 DOUB N N 37 
XRN S34 O37 DOUB N N 38 
XRN C10 H40 SING N N 39 
XRN C11 H41 SING N N 40 
XRN C17 H44 SING N N 41 
XRN C17 H45 SING N N 42 
XRN C18 H47 SING N N 43 
XRN C18 H46 SING N N 44 
XRN C19 H25 SING N N 45 
XRN C20 H24 SING N N 46 
XRN C21 H48 SING N N 47 
XRN C21 H49 SING N N 48 
XRN C23 H51 SING N N 49 
XRN C23 H50 SING N N 50 
XRN C7  H38 SING N N 51 
XRN C8  H39 SING N N 52 
XRN C12 H43 SING N N 53 
XRN C12 H42 SING N N 54 
XRN C29 H52 SING N N 55 
XRN C29 H53 SING N N 56 
XRN C30 H55 SING N N 57 
XRN C30 H54 SING N N 58 
XRN C31 H56 SING N N 59 
XRN C32 H57 SING N N 60 
XRN C32 H58 SING N N 61 
XRN C33 H59 SING N N 62 
XRN C33 H60 SING N N 63 
XRN N35 H62 SING N N 64 
XRN N35 H61 SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XRN SMILES           ACDLabs              12.01 "NS(=O)(=O)C1CCN(CC1)C(=O)N1CC2CN(CC2C1)C(=O)OCc1ccc(OC(F)(F)F)cc1"                                                                                                       
XRN InChI            InChI                1.06  "InChI=1S/C21H27F3N4O6S/c22-21(23,24)34-17-3-1-14(2-4-17)13-33-20(30)28-11-15-9-27(10-16(15)12-28)19(29)26-7-5-18(6-8-26)35(25,31)32/h1-4,15-16,18H,5-13H2,(H2,25,31,32)" 
XRN InChIKey         InChI                1.06  NBLCCWNRAJIHHT-UHFFFAOYSA-N                                                                                                                                               
XRN SMILES_CANONICAL CACTVS               3.385 "N[S](=O)(=O)C1CCN(CC1)C(=O)N2C[C@H]3CN(C[C@@H]3C2)C(=O)OCc4ccc(OC(F)(F)F)cc4"                                                                                            
XRN SMILES           CACTVS               3.385 "N[S](=O)(=O)C1CCN(CC1)C(=O)N2C[CH]3CN(C[CH]3C2)C(=O)OCc4ccc(OC(F)(F)F)cc4"                                                                                               
XRN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1COC(=O)N2C[C@@H]3CN(C[C@H]3C2)C(=O)N4CCC(CC4)S(=O)(=O)N)OC(F)(F)F"                                                                                              
XRN SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1COC(=O)N2CC3CN(CC3C2)C(=O)N4CCC(CC4)S(=O)(=O)N)OC(F)(F)F"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XRN "SYSTEMATIC NAME" ACDLabs              12.01 "[4-(trifluoromethoxy)phenyl]methyl (3aR,6aS)-5-(4-sulfamoylpiperidine-1-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate"                                 
XRN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[4-(trifluoromethyloxy)phenyl]methyl (3~{a}~{S},6~{a}~{S})-2-(4-sulfamoylpiperidin-1-yl)carbonyl-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-5-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XRN "Create component" 2023-06-08 RCSB 
XRN "Initial release"  2024-12-18 RCSB 
# 
