data_VRN
# 
_chem_comp.id                                    VRN 
_chem_comp.name                                  "[(8~{R},9~{S},13~{S},14~{S})-13-methyl-17-oxidanylidene-7,8,9,11,12,14,15,16-octahydro-6~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H23 N O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-29 
_chem_comp.pdbx_modified_date                    2024-04-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        349.445 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VRN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OKT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VRN C13 C1  C 0 1 N N S N N N -1.638 8.968  12.555 -4.090 0.544  -0.117 C13 VRN 1  
VRN C14 C2  C 0 1 N N S N N N -2.723 8.987  13.618 -3.445 -0.727 0.504  C14 VRN 2  
VRN C15 C3  C 0 1 N N N N N N -3.459 10.307 13.424 -4.408 -1.815 0.012  C15 VRN 3  
VRN C16 C4  C 0 1 N N N N N N -2.328 11.308 13.165 -5.796 -1.138 0.181  C16 VRN 4  
VRN C17 C5  C 0 1 N N N N N N -1.206 10.424 12.701 -5.553 0.367  0.157  C17 VRN 5  
VRN O17 O1  O 0 1 N N N N N N -0.083 10.832 12.460 -6.372 1.239  0.326  O17 VRN 6  
VRN C18 C6  C 0 1 N N N N N N -2.129 8.760  11.119 -3.853 0.528  -1.629 C18 VRN 7  
VRN C12 C7  C 0 1 N N N N N N -0.608 7.909  12.933 -3.413 1.757  0.483  C12 VRN 8  
VRN C11 C8  C 0 1 N N N N N N -1.325 6.559  13.140 -1.932 1.723  0.061  C11 VRN 9  
VRN C8  C9  C 0 1 N N R N N N -3.491 7.669  13.695 -2.034 -0.799 -0.043 C8  VRN 10 
VRN C9  C10 C 0 1 N N S N N N -2.481 6.630  14.166 -1.278 0.421  0.500  C9  VRN 11 
VRN C10 C11 C 0 1 Y N N N N N -3.175 5.295  14.430 0.165  0.356  0.092  C10 VRN 12 
VRN C1  C12 C 0 1 Y N N N N N -2.390 4.157  14.559 0.901  1.533  0.088  C1  VRN 13 
VRN C2  C13 C 0 1 Y N N N N N -2.945 2.912  14.789 2.232  1.528  -0.273 C2  VRN 14 
VRN C7  C14 C 0 1 N N N N N N -4.660 7.686  14.655 -1.303 -2.053 0.436  C7  VRN 15 
VRN C6  C15 C 0 1 N N N N N N -5.453 6.379  14.497 0.028  -2.144 -0.309 C6  VRN 16 
VRN C5  C16 C 0 1 Y N N N N N -4.570 5.161  14.565 0.766  -0.832 -0.273 C5  VRN 17 
VRN C4  C17 C 0 1 Y N N N N N -5.153 3.894  14.816 2.107  -0.838 -0.632 C4  VRN 18 
VRN C3  C18 C 0 1 Y N N N N N -4.310 2.765  14.901 2.841  0.336  -0.634 C3  VRN 19 
VRN O21 O2  O 0 1 N N N N N N -4.757 1.463  15.135 4.153  0.319  -0.988 O21 VRN 20 
VRN S22 S1  S 0 1 N N N N N N -5.345 1.000  16.522 5.106  0.092  0.176  S22 VRN 21 
VRN O3  O3  O 0 1 N N N N N N -6.689 1.476  16.481 6.417  0.303  -0.331 O3  VRN 22 
VRN O20 O4  O 0 1 N N N N N N -4.529 1.531  17.579 4.573  0.813  1.278  O20 VRN 23 
VRN N19 N1  N 0 1 N N N N N N -5.255 -0.551 16.433 5.014  -1.512 0.579  N19 VRN 24 
VRN H1  H1  H 0 1 N N N N N N -2.196 9.079  14.579 -3.436 -0.668 1.592  H1  VRN 25 
VRN H2  H2  H 0 1 N N N N N N -4.026 10.578 14.327 -4.219 -2.055 -1.034 H2  VRN 26 
VRN H3  H3  H 0 1 N N N N N N -4.143 10.254 12.564 -4.332 -2.708 0.632  H3  VRN 27 
VRN H4  H4  H 0 1 N N N N N N -2.055 11.845 14.085 -6.453 -1.423 -0.642 H4  VRN 28 
VRN H5  H5  H 0 1 N N N N N N -2.610 12.033 12.387 -6.241 -1.431 1.132  H5  VRN 29 
VRN H6  H6  H 0 1 N N N N N N -2.447 7.715  10.987 -4.391 1.356  -2.090 H6  VRN 30 
VRN H7  H7  H 0 1 N N N N N N -2.979 9.430  10.922 -2.787 0.630  -1.831 H7  VRN 31 
VRN H8  H8  H 0 1 N N N N N N -1.313 8.986  10.416 -4.213 -0.414 -2.043 H8  VRN 32 
VRN H9  H9  H 0 1 N N N N N N 0.134  7.812  12.127 -3.884 2.666  0.108  H9  VRN 33 
VRN H10 H10 H 0 1 N N N N N N -0.101 8.204  13.864 -3.489 1.722  1.570  H10 VRN 34 
VRN H11 H11 H 0 1 N N N N N N -1.736 6.230  12.174 -1.866 1.810  -1.024 H11 VRN 35 
VRN H12 H12 H 0 1 N N N N N N -0.588 5.823  13.495 -1.408 2.561  0.521  H12 VRN 36 
VRN H13 H13 H 0 1 N N N N N N -3.847 7.399  12.690 -2.058 -0.762 -1.132 H13 VRN 37 
VRN H14 H14 H 0 1 N N N N N N -2.057 6.981  15.118 -1.310 0.379  1.589  H14 VRN 38 
VRN H15 H15 H 0 1 N N N N N N -1.317 4.247  14.477 0.426  2.461  0.370  H15 VRN 39 
VRN H16 H16 H 0 1 N N N N N N -2.304 2.048  14.882 2.797  2.449  -0.274 H16 VRN 40 
VRN H17 H17 H 0 1 N N N N N N -4.289 7.770  15.687 -1.121 -1.986 1.508  H17 VRN 41 
VRN H18 H18 H 0 1 N N N N N N -5.311 8.543  14.428 -1.907 -2.935 0.221  H18 VRN 42 
VRN H19 H19 H 0 1 N N N N N N -5.964 6.391  13.523 0.645  -2.913 0.156  H19 VRN 43 
VRN H20 H20 H 0 1 N N N N N N -6.200 6.319  15.302 -0.162 -2.419 -1.347 H20 VRN 44 
VRN H21 H21 H 0 1 N N N N N N -6.221 3.794  14.940 2.581  -1.767 -0.913 H21 VRN 45 
VRN H22 H22 H 0 1 N N N N N N -5.609 -0.955 17.277 5.786  -1.963 0.955  H22 VRN 46 
VRN H23 H23 H 0 1 N N N N N N -5.798 -0.872 15.657 4.188  -2.000 0.439  H23 VRN 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VRN C18 C13 SING N N 1  
VRN O17 C17 DOUB N N 2  
VRN C13 C17 SING N N 3  
VRN C13 C12 SING N N 4  
VRN C13 C14 SING N N 5  
VRN C17 C16 SING N N 6  
VRN C12 C11 SING N N 7  
VRN C11 C9  SING N N 8  
VRN C16 C15 SING N N 9  
VRN C15 C14 SING N N 10 
VRN C14 C8  SING N N 11 
VRN C8  C9  SING N N 12 
VRN C8  C7  SING N N 13 
VRN C9  C10 SING N N 14 
VRN C10 C1  DOUB Y N 15 
VRN C10 C5  SING Y N 16 
VRN C6  C5  SING N N 17 
VRN C6  C7  SING N N 18 
VRN C1  C2  SING Y N 19 
VRN C5  C4  DOUB Y N 20 
VRN C2  C3  DOUB Y N 21 
VRN C4  C3  SING Y N 22 
VRN C3  O21 SING N N 23 
VRN O21 S22 SING N N 24 
VRN N19 S22 SING N N 25 
VRN O3  S22 DOUB N N 26 
VRN S22 O20 DOUB N N 27 
VRN C14 H1  SING N N 28 
VRN C15 H2  SING N N 29 
VRN C15 H3  SING N N 30 
VRN C16 H4  SING N N 31 
VRN C16 H5  SING N N 32 
VRN C18 H6  SING N N 33 
VRN C18 H7  SING N N 34 
VRN C18 H8  SING N N 35 
VRN C12 H9  SING N N 36 
VRN C12 H10 SING N N 37 
VRN C11 H11 SING N N 38 
VRN C11 H12 SING N N 39 
VRN C8  H13 SING N N 40 
VRN C9  H14 SING N N 41 
VRN C1  H15 SING N N 42 
VRN C2  H16 SING N N 43 
VRN C7  H17 SING N N 44 
VRN C7  H18 SING N N 45 
VRN C6  H19 SING N N 46 
VRN C6  H20 SING N N 47 
VRN C4  H21 SING N N 48 
VRN N19 H22 SING N N 49 
VRN N19 H23 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VRN InChI            InChI                1.06  "InChI=1S/C18H23NO4S/c1-18-9-8-14-13-5-3-12(23-24(19,21)22)10-11(13)2-4-15(14)16(18)6-7-17(18)20/h3,5,10,14-16H,2,4,6-9H2,1H3,(H2,19,21,22)/t14-,15-,16+,18+/m1/s1" 
VRN InChIKey         InChI                1.06  RVKFQAJIXCZXQY-CBZIJGRNSA-N                                                                                                                                         
VRN SMILES_CANONICAL CACTVS               3.385 "C[C@]12CC[C@H]3[C@@H](CCc4cc(O[S](N)(=O)=O)ccc34)[C@@H]1CCC2=O"                                                                                                    
VRN SMILES           CACTVS               3.385 "C[C]12CC[CH]3[CH](CCc4cc(O[S](N)(=O)=O)ccc34)[CH]1CCC2=O"                                                                                                          
VRN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]12CC[C@@H]3c4ccc(cc4CC[C@H]3[C@@H]1CCC2=O)OS(=O)(=O)N"                                                                                                        
VRN SMILES           "OpenEye OEToolkits" 2.0.7 "CC12CCC3c4ccc(cc4CCC3C1CCC2=O)OS(=O)(=O)N"                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           VRN 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(8~{R},9~{S},13~{S},14~{S})-13-methyl-17-oxidanylidene-7,8,9,11,12,14,15,16-octahydro-6~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VRN "Create component" 2023-03-29 PDBE 
VRN "Initial release"  2024-04-10 RCSB 
# 
