data_VDN
#

_chem_comp.id                                   VDN
_chem_comp.name                                 "2-{2-ETHOXY-5-[(4-ETHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-5-METHYL-7-PROPYLIMIDAZO[5,1-F][1,2,4]TRIAZIN-4(1H)-ONE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H32 N6 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "VARDENAFIL, LEVITRA"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-07-10
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       488.603
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VDN
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1UHO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VDN  C1    C1    C  0  1  N  N  N   5.649  65.412  87.021  -5.759  -0.180   2.537  C1    VDN   1  
VDN  C2    C2    C  0  1  N  N  N   5.743  66.607  86.066  -4.840   0.193   1.373  C2    VDN   2  
VDN  O3    O3    O  0  1  N  N  N   4.448  66.652  85.451  -3.477   0.019   1.766  O3    VDN   3  
VDN  C4    C4    C  0  1  Y  N  N   4.008  67.563  84.512  -2.714   0.363   0.699  C4    VDN   4  
VDN  C5    C5    C  0  1  Y  N  N   4.736  68.613  83.976  -3.312   0.785  -0.478  C5    VDN   5  
VDN  C6    C6    C  0  1  Y  N  N   4.148  69.523  82.977  -2.534   1.135  -1.563  C6    VDN   6  
VDN  C7    C7    C  0  1  Y  N  N   2.847  69.329  82.555  -1.152   1.074  -1.484  C7    VDN   7  
VDN  C8    C8    C  0  1  Y  N  N   2.044  68.207  83.113  -0.540   0.664  -0.320  C8    VDN   8  
VDN  C9    C9    C  0  1  Y  N  N   2.548  67.357  84.027  -1.315   0.306   0.786  C9    VDN   9  
VDN  S10   S10   S  0  1  N  N  N   2.096  70.361  81.367  -0.173   1.525  -2.878  S10   VDN  10  
VDN  O11   O11   O  0  1  N  N  N   2.700  70.039  80.092  -0.996   2.369  -3.671  O11   VDN  11  
VDN  O12   O12   O  0  1  N  N  N   0.674  70.087  81.440   1.102   1.872  -2.358  O12   VDN  12  
VDN  C13   C13   C  0  1  N  N  N   2.476  77.196  80.332   2.694  -2.940  -6.821  C13   VDN  13  
VDN  N14   N14   N  0  1  N  N  N   2.396  71.942  81.781   0.065   0.155  -3.778  N14   VDN  14  
VDN  C15   C15   C  0  1  N  N  N   1.175  72.726  82.109   1.225  -0.716  -3.540  C15   VDN  15  
VDN  C16   C16   C  0  1  N  N  N   1.482  74.208  82.424   1.900  -1.007  -4.880  C16   VDN  16  
VDN  N17   N17   N  0  1  N  N  N   2.190  74.844  81.289   0.923  -1.584  -5.810  N17   VDN  17  
VDN  C18   C18   C  0  1  N  N  N   3.439  74.092  81.010  -0.065  -0.542  -6.109  C18   VDN  18  
VDN  C19   C19   C  0  1  N  N  N   3.172  72.602  80.707  -0.873  -0.223  -4.847  C19   VDN  19  
VDN  C20   C20   C  0  1  N  N  N   2.446  76.265  81.569   1.642  -1.856  -7.062  C20   VDN  20  
VDN  C21   C21   C  0  1  Y  N  N   1.702  66.271  84.553  -0.667  -0.133   2.034  C21   VDN  21  
VDN  N22   N22   N  0  1  Y  N  N   1.597  66.025  85.891  -1.199  -1.132   2.706  N22   VDN  22  
VDN  C23   C23   C  0  1  Y  N  N   0.815  65.023  86.515  -0.655  -1.575   3.855  C23   VDN  23  
VDN  C24   C24   C  0  1  Y  N  N   0.057  64.195  85.542   0.564  -0.928   4.357  C24   VDN  24  
VDN  N25   N25   N  0  1  Y  N  N   0.217  64.508  84.151   1.101   0.118   3.631  N25   VDN  25  
VDN  N26   N26   N  0  1  Y  N  N   0.997  65.498  83.691   0.462   0.510   2.450  N26   VDN  26  
VDN  O27   O27   O  0  1  N  N  N   0.789  64.885  87.721  -1.161  -2.501   4.464  O27   VDN  27  
VDN  C28   C28   C  0  1  Y  N  N  -0.835  63.129  85.464   1.364  -1.101   5.440  C28   VDN  28  
VDN  N29   N29   N  0  1  Y  N  N  -1.203  62.803  84.110   2.347  -0.199   5.366  N29   VDN  29  
VDN  C30   C30   C  0  1  Y  N  N  -0.545  63.662  83.402   2.197   0.528   4.287  C30   VDN  30  
VDN  C31   C31   C  0  1  N  N  N  -1.383  62.372  86.669   1.177  -2.126   6.530  C31   VDN  31  
VDN  C32   C32   C  0  1  N  N  N  -0.544  63.806  81.886   3.105   1.650   3.856  C32   VDN  32  
VDN  C33   C33   C  0  1  N  N  N   0.581  63.056  81.129   4.217   1.092   2.964  C33   VDN  33  
VDN  C34   C34   C  0  1  N  N  N   0.200  61.591  80.911   5.140   2.232   2.526  C34   VDN  34  
VDN  H11   1H1   H  0  1  N  N  N   5.336  64.458  86.536  -6.798  -0.048   2.237  H11   VDN  35  
VDN  H12   2H1   H  0  1  N  N  N   6.656  65.377  87.499  -5.591  -1.221   2.813  H12   VDN  36  
VDN  H13   3H1   H  0  1  N  N  N   4.799  65.463  87.741  -5.543   0.461   3.391  H13   VDN  37  
VDN  H21   1H2   H  0  1  N  N  N   6.593  66.556  85.347  -5.008   1.234   1.097  H21   VDN  38  
VDN  H22   2H2   H  0  1  N  N  N   6.056  67.561  86.551  -5.056  -0.448   0.519  H22   VDN  39  
VDN  H5    H5    H  0  1  N  N  N   5.771  68.723  84.340  -4.389   0.835  -0.548  H5    VDN  40  
VDN  H6    H6    H  0  1  N  N  N   4.696  70.371  82.534  -3.005   1.459  -2.479  H6    VDN  41  
VDN  H8    H8    H  0  1  N  N  N   1.001  67.990  82.829   0.537   0.619  -0.263  H8    VDN  42  
VDN  H131  1H13  H  0  0  N  N  N   1.531  77.087  79.750   3.228  -3.141  -7.750  H131  VDN  43  
VDN  H132  2H13  H  0  0  N  N  N   2.670  78.273  80.544   3.400  -2.598  -6.064  H132  VDN  44  
VDN  H133  3H13  H  0  0  N  N  N   3.213  76.816  79.587   2.205  -3.851  -6.477  H133  VDN  45  
VDN  H151  1H15  H  0  0  N  N  N   0.606  72.250  82.942   1.930  -0.219  -2.874  H151  VDN  46  
VDN  H152  2H15  H  0  0  N  N  N   0.415  72.639  81.298   0.889  -1.650  -3.088  H152  VDN  47  
VDN  H161  1H16  H  0  0  N  N  N   2.046  74.321  83.380   2.718  -1.712  -4.730  H161  VDN  48  
VDN  H162  2H16  H  0  0  N  N  N   0.562  74.771  82.706   2.293  -0.079  -5.295  H162  VDN  49  
VDN  H181  1H18  H  0  0  N  N  N   4.173  74.208  81.841  -0.738  -0.894  -6.891  H181  VDN  50  
VDN  H182  2H18  H  0  0  N  N  N   4.022  74.571  80.189   0.446   0.357  -6.449  H182  VDN  51  
VDN  H191  1H19  H  0  0  N  N  N   2.677  72.475  79.716  -1.440  -1.103  -4.542  H191  VDN  52  
VDN  H192  2H19  H  0  0  N  N  N   4.122  72.056  80.503  -1.555   0.602  -5.046  H192  VDN  53  
VDN  H201  1H20  H  0  0  N  N  N   1.709  76.645  82.314   0.936  -2.197  -7.819  H201  VDN  54  
VDN  H202  2H20  H  0  0  N  N  N   3.391  76.374  82.151   2.131  -0.944  -7.406  H202  VDN  55  
VDN  H26   H26   H  0  1  N  N  N   1.646  65.105  83.009   0.822   1.242   1.926  H26   VDN  56  
VDN  H311  1H31  H  0  0  N  N  N  -1.841  63.130  87.347   0.559  -1.704   7.323  H311  VDN  57  
VDN  H312  2H31  H  0  0  N  N  N  -2.097  61.518  86.607   0.688  -3.009   6.118  H312  VDN  58  
VDN  H313  3H31  H  0  0  N  N  N  -0.504  62.017  87.256   2.149  -2.405   6.936  H313  VDN  59  
VDN  H321  1H32  H  0  0  N  N  N  -0.530  64.886  81.610   2.530   2.390   3.299  H321  VDN  60  
VDN  H322  2H32  H  0  0  N  N  N  -1.538  63.507  81.478   3.546   2.119   4.735  H322  VDN  61  
VDN  H331  1H33  H  0  0  N  N  N   1.564  63.155  81.645   4.792   0.352   3.521  H331  VDN  62  
VDN  H332  2H33  H  0  0  N  N  N   0.844  63.562  80.171   3.776   0.623   2.085  H332  VDN  63  
VDN  H341  1H34  H  0  0  N  N  N  -0.783  61.492  80.395   5.931   1.834   1.891  H341  VDN  64  
VDN  H342  2H34  H  0  0  N  N  N   1.010  61.051  80.366   4.564   2.971   1.970  H342  VDN  65  
VDN  H343  3H34  H  0  0  N  N  N  -0.062  61.085  81.869   5.580   2.701   3.406  H343  VDN  66  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VDN  C1   C2    SING  N  N   1  
VDN  C1   H11   SING  N  N   2  
VDN  C1   H12   SING  N  N   3  
VDN  C1   H13   SING  N  N   4  
VDN  C2   O3    SING  N  N   5  
VDN  C2   H21   SING  N  N   6  
VDN  C2   H22   SING  N  N   7  
VDN  O3   C4    SING  N  N   8  
VDN  C4   C5    DOUB  Y  N   9  
VDN  C4   C9    SING  Y  N  10  
VDN  C5   C6    SING  Y  N  11  
VDN  C5   H5    SING  N  N  12  
VDN  C6   C7    DOUB  Y  N  13  
VDN  C6   H6    SING  N  N  14  
VDN  C7   C8    SING  Y  N  15  
VDN  C7   S10   SING  N  N  16  
VDN  C8   C9    DOUB  Y  N  17  
VDN  C8   H8    SING  N  N  18  
VDN  C9   C21   SING  Y  N  19  
VDN  S10  O11   DOUB  N  N  20  
VDN  S10  O12   DOUB  N  N  21  
VDN  S10  N14   SING  N  N  22  
VDN  C13  C20   SING  N  N  23  
VDN  C13  H131  SING  N  N  24  
VDN  C13  H132  SING  N  N  25  
VDN  C13  H133  SING  N  N  26  
VDN  N14  C15   SING  N  N  27  
VDN  N14  C19   SING  N  N  28  
VDN  C15  C16   SING  N  N  29  
VDN  C15  H151  SING  N  N  30  
VDN  C15  H152  SING  N  N  31  
VDN  C16  N17   SING  N  N  32  
VDN  C16  H161  SING  N  N  33  
VDN  C16  H162  SING  N  N  34  
VDN  N17  C18   SING  N  N  35  
VDN  N17  C20   SING  N  N  36  
VDN  C18  C19   SING  N  N  37  
VDN  C18  H181  SING  N  N  38  
VDN  C18  H182  SING  N  N  39  
VDN  C19  H191  SING  N  N  40  
VDN  C19  H192  SING  N  N  41  
VDN  C20  H201  SING  N  N  42  
VDN  C20  H202  SING  N  N  43  
VDN  C21  N22   DOUB  Y  N  44  
VDN  C21  N26   SING  Y  N  45  
VDN  N22  C23   SING  Y  N  46  
VDN  C23  C24   SING  Y  N  47  
VDN  C23  O27   DOUB  N  N  48  
VDN  C24  N25   SING  Y  N  49  
VDN  C24  C28   DOUB  Y  N  50  
VDN  N25  N26   SING  Y  N  51  
VDN  N25  C30   SING  Y  N  52  
VDN  N26  H26   SING  N  N  53  
VDN  C28  N29   SING  Y  N  54  
VDN  C28  C31   SING  N  N  55  
VDN  N29  C30   DOUB  Y  N  56  
VDN  C30  C32   SING  N  N  57  
VDN  C31  H311  SING  N  N  58  
VDN  C31  H312  SING  N  N  59  
VDN  C31  H313  SING  N  N  60  
VDN  C32  C33   SING  N  N  61  
VDN  C32  H321  SING  N  N  62  
VDN  C32  H322  SING  N  N  63  
VDN  C33  C34   SING  N  N  64  
VDN  C33  H331  SING  N  N  65  
VDN  C33  H332  SING  N  N  66  
VDN  C34  H341  SING  N  N  67  
VDN  C34  H342  SING  N  N  68  
VDN  C34  H343  SING  N  N  69  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VDN  SMILES            ACDLabs               10.04  "O=C2N=C(Nn1c(nc(c12)C)CCC)c3cc(ccc3OCC)S(=O)(=O)N4CCN(CC)CC4"  
VDN  SMILES_CANONICAL  CACTVS                3.341  "CCCc1nc(C)c2n1NC(=NC2=O)c3cc(ccc3OCC)[S](=O)(=O)N4CCN(CC)CC4"  
VDN  SMILES            CACTVS                3.341  "CCCc1nc(C)c2n1NC(=NC2=O)c3cc(ccc3OCC)[S](=O)(=O)N4CCN(CC)CC4"  
VDN  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCc1nc(c2n1NC(=NC2=O)c3cc(ccc3OCC)S(=O)(=O)N4CCN(CC4)CC)C"  
VDN  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCc1nc(c2n1NC(=NC2=O)c3cc(ccc3OCC)S(=O)(=O)N4CCN(CC4)CC)C"  
VDN  InChI             InChI                 1.03   "InChI=1S/C23H32N6O4S/c1-5-8-20-24-16(4)21-23(30)25-22(26-29(20)21)18-15-17(9-10-19(18)33-7-3)34(31,32)28-13-11-27(6-2)12-14-28/h9-10,15H,5-8,11-14H2,1-4H3,(H,25,26,30)"  
VDN  InChIKey          InChI                 1.03   SECKRCOLJRRGGV-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VDN  "SYSTEMATIC NAME"  ACDLabs               10.04  "2-{2-ethoxy-5-[(4-ethylpiperazin-1-yl)sulfonyl]phenyl}-5-methyl-7-propylimidazo[5,1-f][1,2,4]triazin-4(1H)-one"  
VDN  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-[2-ethoxy-5-(4-ethylpiperazin-1-yl)sulfonyl-phenyl]-5-methyl-7-propyl-1H-imidazo[5,1-f][1,2,4]triazin-4-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VDN  "Create component"      2003-07-10  PDBJ  
VDN  "Modify aromatic_flag"  2011-06-04  RCSB  
VDN  "Modify descriptor"     2011-06-04  RCSB  
VDN  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     VDN
_pdbx_chem_comp_synonyms.name        "VARDENAFIL, LEVITRA"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
