data_SLN
#

_chem_comp.id                                   SLN
_chem_comp.name                                 "1-(4-AZIDO-2-NITROPHENYL)AMINO-3-(1-OXYL-2,2,5,5-TETRAMETHYLPYRROLIDINYL-3-CARBAMIDO)-2-PROPYLDISPHOSPHATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H29 N7 O11 P2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(SL-NANDP)"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-04-22
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       581.411
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SLN
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1SYP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SLN  O1B     O1B     O   0  1  N  N  N  41.633  41.736  56.274  -0.173   5.579  -1.109  O1B     SLN   1  
SLN  PB      PB      P   0  1  N  N  N  40.373  42.103  56.958  -0.400   4.233  -0.255  PB      SLN   2  
SLN  O2B     O2B     O   0  1  N  N  N  39.290  42.672  56.091  -1.895   4.221   0.342  O2B     SLN   3  
SLN  O3B     O3B     O   0  1  N  N  N  39.874  41.029  57.830   0.576   4.185   0.857  O3B     SLN   4  
SLN  O3A     O3A     O   0  1  N  N  N  40.822  43.143  58.024  -0.192   2.952  -1.207  O3A     SLN   5  
SLN  PA      PA      P   0  1  N  N  R  40.735  44.663  57.716  -0.034   1.674  -0.241  PA      SLN   6  
SLN  O1A     O1A     O   0  1  N  N  N  41.483  45.000  56.493   1.429   1.689   0.433  O1A     SLN   7  
SLN  O2A     O2A     O   0  1  N  N  N  39.314  45.063  57.775  -1.065   1.727   0.819  O2A     SLN   8  
SLN  O2      O2      O   0  1  N  N  N  41.517  45.323  58.976  -0.215   0.325  -1.101  O2      SLN   9  
SLN  "C2'"   "C2'"   C   0  1  N  N  S  40.980  45.401  60.310  -0.183  -0.762  -0.174  "C2'"   SLN  10  
SLN  C1A     C1A     C   0  1  N  N  N  39.620  46.161  60.313   0.978  -1.696  -0.524  C1A     SLN  11  
SLN  NB      NB      N   0  1  N  N  N  39.329  46.892  61.584   2.247  -0.988  -0.336  NB      SLN  12  
SLN  C1B     C1B     C   0  1  N  N  N  39.569  48.351  61.503   3.412  -1.618  -0.586  C1B     SLN  13  
SLN  OC      OC      O   0  1  N  N  N  39.773  48.877  60.414   3.410  -2.769  -0.966  OC      SLN  14  
SLN  CA      CA      C   0  1  N  N  R  39.419  49.250  62.739   4.718  -0.890  -0.393  CA      SLN  15  
SLN  CB      CB      C   0  1  N  N  N  38.295  50.285  62.526   5.761  -1.376  -1.425  CB      SLN  16  
SLN  CC      CC      C   0  1  N  N  N  39.027  51.570  62.110   7.071  -1.419  -0.600  CC      SLN  17  
SLN  CC1     CC1     C   0  1  N  N  N  38.490  52.725  62.959   8.067  -2.402  -1.219  CC1     SLN  18  
SLN  CC2     CC2     C   0  1  N  N  N  38.779  51.945  60.646   7.689  -0.023  -0.494  CC2     SLN  19  
SLN  ND      ND      N   0  1  N  N  N  40.483  51.353  62.315   6.623  -1.896   0.733  ND      SLN  20  
SLN  OR      OR      O   0  1  N  N  N  41.281  52.372  62.534   7.564  -1.362   1.717  OR      SLN  21  
SLN  CE      CE      C   0  1  N  N  N  40.650  50.109  63.098   5.324  -1.231   0.981  CE      SLN  22  
SLN  CE1     CE1     C   0  1  N  N  N  40.616  50.388  64.618   5.545   0.052   1.786  CE1     SLN  23  
SLN  CE2     CE2     C   0  1  N  N  N  41.998  49.424  62.803   4.388  -2.170   1.745  CE2     SLN  24  
SLN  "C1'"   "C1'"   C   0  1  N  N  N  42.034  46.174  61.099  -1.500  -1.536  -0.250  "C1'"   SLN  25  
SLN  N1      N1      N   0  1  N  N  N  43.340  45.467  61.045  -2.612  -0.643   0.085  N1      SLN  26  
SLN  CB1     CB1     C   0  1  Y  N  N  44.380  46.445  61.190  -3.892  -1.115   0.083  CB1     SLN  27  
SLN  CB2     CB2     C   0  1  Y  N  N  45.127  46.984  60.121  -4.957  -0.212   0.260  CB2     SLN  28  
SLN  NN1     NN1     N   1  1  N  N  N  45.143  46.406  58.872  -4.671   1.230   0.437  NN1     SLN  29  
SLN  ON1     ON1     O  -1  1  N  N  N  44.616  45.311  58.706  -5.382   1.942   1.286  ON1     SLN  30  
SLN  ON2     ON2     O   0  1  N  N  N  45.971  46.783  58.024  -3.705   1.799  -0.253  ON2     SLN  31  
SLN  CB3     CB3     C   0  1  Y  N  N  45.892  48.142  60.362  -6.238  -0.642   0.258  CB3     SLN  32  
SLN  CB4     CB4     C   0  1  Y  N  N  46.028  48.679  61.634  -6.511  -2.083   0.080  CB4     SLN  33  
SLN  NA1     NA1     N   0  1  N  N  N  46.901  49.813  61.826  -7.736  -2.535   0.078  NA1     SLN  34  
SLN  NA2     NA2     N   1  1  N  N  N  46.188  50.927  62.425  -7.929  -3.634  -0.059  NA2     SLN  35  
SLN  NA3     NA3     N  -1  1  N  N  N  45.494  51.890  63.109  -8.122  -4.733  -0.195  NA3     SLN  36  
SLN  CB5     CB5     C   0  1  Y  N  N  45.382  48.047  62.732  -5.366  -3.000  -0.096  CB5     SLN  37  
SLN  CB6     CB6     C   0  1  Y  N  N  44.536  46.946  62.464  -4.113  -2.496  -0.089  CB6     SLN  38  
SLN  H1B     H1B     H   0  1  N  N  N  42.319  41.376  56.823  -0.307   6.321  -0.502  H1B     SLN  39  
SLN  H2B     H2B     H   0  1  N  N  N  38.481  42.908  56.530  -2.498   4.254  -0.413  H2B     SLN  40  
SLN  H1A     H1A     H   0  1  N  N  N  41.430  45.930  56.305   2.070   1.653  -0.291  H1A     SLN  41  
SLN  H21     H21     H   0  1  N  N  N  40.864  44.384  60.741  -0.046  -0.376   0.836  H21     SLN  42  
SLN  H1AA    H1AA    H   0  0  N  N  N  38.851  45.388  60.212   0.889  -2.012  -1.564  H1AA    SLN  43  
SLN  H2AA    H2AA    H   0  0  N  N  N  39.596  46.802  59.404   0.949  -2.570   0.126  H2AA    SLN  44  
SLN  HNB     HNB     H   0  1  N  N  N  38.334  46.798  61.751   2.248  -0.067  -0.032  HNB     SLN  45  
SLN  HCA     HCA     H   0  1  N  N  N  39.167  48.611  63.577   4.568   0.186  -0.484  HCA     SLN  46  
SLN  HCB1    HCB1    H   0  0  N  N  N  37.589  49.971  61.756   5.847  -0.667  -2.249  HCB1    SLN  47  
SLN  HCB2    HCB2    H   0  0  N  N  N  37.763  50.436  63.470   5.505  -2.369  -1.795  HCB2    SLN  48  
SLN  H1CC    H1CC    H   0  0  N  N  N  38.675  52.547  64.017   8.964  -2.447  -0.602  H1CC    SLN  49  
SLN  H2CC    H2CC    H   0  0  N  N  N  39.008  53.638  62.682   7.614  -3.391  -1.275  H2CC    SLN  50  
SLN  H3CC    H3CC    H   0  0  N  N  N  37.416  52.839  62.803   8.333  -2.067  -2.222  H3CC    SLN  51  
SLN  H4CC    H4CC    H   0  0  N  N  N  37.733  52.208  60.482   8.119   0.258  -1.455  H4CC    SLN  52  
SLN  H5CC    H5CC    H   0  0  N  N  N  39.045  51.128  59.982   6.917   0.696  -0.217  H5CC    SLN  53  
SLN  H6CC    H6CC    H   0  0  N  N  N  39.423  52.786  60.396   8.470  -0.028   0.266  H6CC    SLN  54  
SLN  HOR     HOR     H   0  1  N  N  N  41.819  52.238  63.333   8.413  -1.795   1.556  HOR     SLN  55  
SLN  H1CE    H1CE    H   0  0  N  N  N  40.813  49.467  65.172   4.584   0.521   1.994  H1CE    SLN  56  
SLN  H2CE    H2CE    H   0  0  N  N  N  39.646  50.771  64.931   6.042  -0.190   2.725  H2CE    SLN  57  
SLN  H3CE    H3CE    H   0  0  N  N  N  41.372  51.124  64.876   6.168   0.738   1.212  H3CE    SLN  58  
SLN  H4CE    H4CE    H   0  0  N  N  N  42.124  49.275  61.733   4.314  -3.119   1.215  H4CE    SLN  59  
SLN  H5CE    H5CE    H   0  0  N  N  N  42.044  48.460  63.313   4.783  -2.342   2.746  H5CE    SLN  60  
SLN  H6CE    H6CE    H   0  0  N  N  N  42.817  50.051  63.158   3.399  -1.717   1.818  H6CE    SLN  61  
SLN  H11     H11     H   0  1  N  N  N  42.121  47.174  60.655  -1.637  -1.923  -1.260  H11     SLN  62  
SLN  H12     H12     H   0  1  N  N  N  41.703  46.268  62.134  -1.476  -2.366   0.456  H12     SLN  63  
SLN  HN1     HN1     H   0  1  N  N  N  43.472  45.100  60.089  -2.438   0.285   0.308  HN1     SLN  64  
SLN  HB3     HB3     H   0  1  N  N  N  46.394  48.668  59.568  -7.051   0.057   0.389  HB3     SLN  65  
SLN  HB5     HB5     H   0  1  N  N  N  45.461  48.436  63.722  -5.529  -4.060  -0.229  HB5     SLN  66  
SLN  HB6     HB6     H   0  1  N  N  N  43.959  46.525  63.285  -3.271  -3.159  -0.217  HB6     SLN  67  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SLN  O1B    PB      SING  N  N   1  
SLN  O1B    H1B     SING  N  N   2  
SLN  PB     O2B     SING  N  N   3  
SLN  PB     O3B     DOUB  N  N   4  
SLN  PB     O3A     SING  N  N   5  
SLN  O2B    H2B     SING  N  N   6  
SLN  O3A    PA      SING  N  N   7  
SLN  PA     O1A     SING  N  N   8  
SLN  PA     O2A     DOUB  N  N   9  
SLN  PA     O2      SING  N  N  10  
SLN  O1A    H1A     SING  N  N  11  
SLN  O2     "C2'"   SING  N  N  12  
SLN  "C2'"  C1A     SING  N  N  13  
SLN  "C2'"  "C1'"   SING  N  N  14  
SLN  "C2'"  H21     SING  N  N  15  
SLN  C1A    NB      SING  N  N  16  
SLN  C1A    H1AA    SING  N  N  17  
SLN  C1A    H2AA    SING  N  N  18  
SLN  NB     C1B     SING  N  N  19  
SLN  NB     HNB     SING  N  N  20  
SLN  C1B    OC      DOUB  N  N  21  
SLN  C1B    CA      SING  N  N  22  
SLN  CA     CB      SING  N  N  23  
SLN  CA     CE      SING  N  N  24  
SLN  CA     HCA     SING  N  N  25  
SLN  CB     CC      SING  N  N  26  
SLN  CB     HCB1    SING  N  N  27  
SLN  CB     HCB2    SING  N  N  28  
SLN  CC     CC1     SING  N  N  29  
SLN  CC     CC2     SING  N  N  30  
SLN  CC     ND      SING  N  N  31  
SLN  CC1    H1CC    SING  N  N  32  
SLN  CC1    H2CC    SING  N  N  33  
SLN  CC1    H3CC    SING  N  N  34  
SLN  CC2    H4CC    SING  N  N  35  
SLN  CC2    H5CC    SING  N  N  36  
SLN  CC2    H6CC    SING  N  N  37  
SLN  ND     OR      SING  N  N  38  
SLN  ND     CE      SING  N  N  39  
SLN  OR     HOR     SING  N  N  40  
SLN  CE     CE1     SING  N  N  41  
SLN  CE     CE2     SING  N  N  42  
SLN  CE1    H1CE    SING  N  N  43  
SLN  CE1    H2CE    SING  N  N  44  
SLN  CE1    H3CE    SING  N  N  45  
SLN  CE2    H4CE    SING  N  N  46  
SLN  CE2    H5CE    SING  N  N  47  
SLN  CE2    H6CE    SING  N  N  48  
SLN  "C1'"  N1      SING  N  N  49  
SLN  "C1'"  H11     SING  N  N  50  
SLN  "C1'"  H12     SING  N  N  51  
SLN  N1     CB1     SING  N  N  52  
SLN  N1     HN1     SING  N  N  53  
SLN  CB1    CB2     DOUB  Y  N  54  
SLN  CB1    CB6     SING  Y  N  55  
SLN  CB2    NN1     SING  N  N  56  
SLN  CB2    CB3     SING  Y  N  57  
SLN  NN1    ON1     SING  N  N  58  
SLN  NN1    ON2     DOUB  N  N  59  
SLN  CB3    CB4     DOUB  Y  N  60  
SLN  CB3    HB3     SING  N  N  61  
SLN  CB4    NA1     SING  N  N  62  
SLN  CB4    CB5     SING  Y  N  63  
SLN  NA1    NA2     DOUB  N  N  64  
SLN  NA2    NA3     DOUB  N  N  65  
SLN  CB5    CB6     DOUB  Y  N  66  
SLN  CB5    HB5     SING  N  N  67  
SLN  CB6    HB6     SING  N  N  68  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SLN  SMILES            ACDLabs               10.04  "[O-][N+](=O)c1cc(/N=[N+]=[N-])ccc1NCC(OP(=O)(O)OP(=O)(O)O)CNC(=O)C2C(N(O)C(C)(C)C2)(C)C"  
SLN  SMILES_CANONICAL  CACTVS                3.341  "CC1(C)C[C@@H](C(=O)NC[C@H](CNc2ccc(cc2[N+]([O-])=O)N=[N+]=[N-])O[P@](O)(=O)O[P](O)(O)=O)C(C)(C)N1O"  
SLN  SMILES            CACTVS                3.341  "CC1(C)C[CH](C(=O)NC[CH](CNc2ccc(cc2[N+]([O-])=O)N=[N+]=[N-])O[P](O)(=O)O[P](O)(O)=O)C(C)(C)N1O"  
SLN  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC1(C[C@H](C([N@@]1O)(C)C)C(=O)NC[C@H](CNc2ccc(cc2[N+](=O)[O-])N=[N+]=[N-])O[P@@](=O)(O)OP(=O)(O)O)C"  
SLN  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1(CC(C(N1O)(C)C)C(=O)NCC(CNc2ccc(cc2[N+](=O)[O-])N=[N+]=[N-])OP(=O)(O)OP(=O)(O)O)C"  
SLN  InChI             InChI                 1.03   "InChI=1S/C18H29N7O11P2/c1-17(2)8-13(18(3,4)25(17)29)16(26)21-10-12(35-38(33,34)36-37(30,31)32)9-20-14-6-5-11(22-23-19)7-15(14)24(27)28/h5-7,12-13,20,29H,8-10H2,1-4H3,(H,21,26)(H,33,34)(H2,30,31,32)/t12-,13-/m0/s1"  
SLN  InChIKey          InChI                 1.03   HZRFLJTVCVQAIS-STQMWFEESA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SLN  "SYSTEMATIC NAME"  ACDLabs               10.04  "(1S)-2-[(4-azido-2-nitrophenyl)amino]-1-[({[(3R)-1-hydroxy-2,2,5,5-tetramethylpyrrolidin-3-yl]carbonyl}amino)methyl]ethyl trihydrogen diphosphate"  
SLN  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[(2S)-1-[(4-azido-2-nitro-phenyl)amino]-3-[[(1R,3R)-1-hydroxy-2,2,5,5-tetramethyl-pyrrolidin-3-yl]carbonylamino]propan-2-yl] phosphono hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SLN  "Create component"   2003-04-22  RCSB  
SLN  "Modify descriptor"  2011-06-04  RCSB  
SLN  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SLN
_pdbx_chem_comp_synonyms.name        "(SL-NANDP)"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
