data_YRM
#

_chem_comp.id                                   YRM
_chem_comp.name                                 "(5S)-6,6-dimethyl-8-[(4S)-7-(trifluoromethyl)imidazo[1,5-a]pyridin-5-yl]-1,3,8-triazaspiro[4.5]decane-2,4-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H18 F3 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-29
_chem_comp.pdbx_modified_date                   2021-08-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       381.352
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YRM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7M7D
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YRM  C01  C1   C  0  1  Y  N  N  -32.077  -27.922  -33.095   1.122   0.575   0.180  C01  YRM   1  
YRM  C03  C2   C  0  1  N  N  N  -32.756  -27.157  -35.418  -1.118   1.066  -0.760  C03  YRM   2  
YRM  C04  C3   C  0  1  N  N  N  -32.232  -27.000  -36.823  -2.130  -0.023  -1.134  C04  YRM   3  
YRM  C05  C4   C  0  1  N  N  S  -31.231  -25.997  -36.871  -2.869  -0.481   0.119  C05  YRM   4  
YRM  C06  C5   C  0  1  N  N  N  -30.166  -26.410  -36.010  -1.894  -1.046   1.147  C06  YRM   5  
YRM  C07  C6   C  0  1  N  N  N  -30.579  -26.486  -34.560  -0.881   0.036   1.537  C07  YRM   6  
YRM  C08  C7   C  0  1  N  N  N  -31.668  -28.286  -37.327  -3.134   0.539  -2.143  C08  YRM   7  
YRM  C09  C8   C  0  1  N  N  N  -33.351  -26.553  -37.682  -1.393  -1.211  -1.755  C09  YRM   8  
YRM  C11  C9   C  0  1  Y  N  N  -31.377  -29.505  -31.438   3.155   1.792  -0.090  C11  YRM   9  
YRM  C12  C10  C  0  1  Y  N  N  -32.539  -29.346  -30.690   3.881   0.583  -0.078  C12  YRM  10  
YRM  C13  C11  C  0  1  Y  N  N  -33.446  -28.467  -31.190   3.214  -0.594   0.063  C13  YRM  11  
YRM  C14  C12  C  0  1  Y  N  N  -33.225  -27.770  -32.367   1.815  -0.593   0.194  C14  YRM  12  
YRM  C15  C13  C  0  1  Y  N  N  -29.967  -29.194  -33.054   1.361   3.063  -0.008  C15  YRM  13  
YRM  C17  C14  C  0  1  Y  N  N  -30.309  -30.297  -31.205   3.515   3.118  -0.212  C17  YRM  14  
YRM  C19  C15  C  0  1  N  N  N  -31.231  -23.860  -37.452  -5.075  -0.949   0.137  C19  YRM  15  
YRM  C21  C16  C  0  1  N  N  N  -30.516  -25.780  -38.050  -3.657   0.664   0.713  C21  YRM  16  
YRM  C24  C17  C  0  1  N  N  N  -34.603  -28.231  -30.539   3.973  -1.895   0.079  C24  YRM  17  
YRM  F25  F1   F  0  1  N  N  N  -34.699  -27.232  -29.722   3.748  -2.552   1.294  F25  YRM  18  
YRM  F26  F2   F  0  1  N  N  N  -35.662  -27.999  -31.224   3.535  -2.703  -0.976  F26  YRM  19  
YRM  F27  F3   F  0  1  N  N  N  -35.085  -29.115  -29.757   5.340  -1.640  -0.067  F27  YRM  20  
YRM  N02  N1   N  0  1  N  N  N  -31.799  -27.235  -34.314  -0.255   0.560   0.315  N02  YRM  21  
YRM  N10  N2   N  0  1  Y  N  N  -31.167  -28.825  -32.580   1.780   1.771   0.039  N10  YRM  22  
YRM  N16  N3   N  0  1  Y  N  N  -29.428  -30.071  -32.195   2.398   3.847  -0.157  N16  YRM  23  
YRM  N18  N4   N  0  1  N  N  N  -31.673  -24.732  -36.522  -3.891  -1.478  -0.223  N18  YRM  24  
YRM  N20  N5   N  0  1  N  N  N  -30.495  -24.483  -38.427  -4.948   0.272   0.671  N20  YRM  25  
YRM  O22  O1   O  0  1  N  N  N  -29.967  -26.666  -38.664  -3.222   1.712   1.139  O22  YRM  26  
YRM  O23  O2   O  0  1  N  N  N  -31.434  -22.667  -37.448  -6.141  -1.515  -0.008  O23  YRM  27  
YRM  H1   H1   H  0  1  N  N  N  -33.410  -26.295  -35.219  -0.510   1.315  -1.630  H1   YRM  28  
YRM  H2   H2   H  0  1  N  N  N  -33.351  -28.082  -35.396  -1.646   1.956  -0.417  H2   YRM  29  
YRM  H3   H3   H  0  1  N  N  N  -29.822  -27.405  -36.330  -2.444  -1.365   2.032  H3   YRM  30  
YRM  H4   H4   H  0  1  N  N  N  -29.340  -25.689  -36.102  -1.368  -1.899   0.718  H4   YRM  31  
YRM  H5   H5   H  0  1  N  N  N  -29.764  -26.964  -33.996  -1.392   0.843   2.061  H5   YRM  32  
YRM  H6   H6   H  0  1  N  N  N  -30.727  -25.460  -34.192  -0.116  -0.396   2.183  H6   YRM  33  
YRM  H7   H7   H  0  1  N  N  N  -30.839  -28.603  -36.678  -2.606   0.867  -3.038  H7   YRM  34  
YRM  H8   H8   H  0  1  N  N  N  -32.452  -29.057  -37.322  -3.854  -0.236  -2.408  H8   YRM  35  
YRM  H9   H9   H  0  1  N  N  N  -31.297  -28.146  -38.353  -3.659   1.385  -1.700  H9   YRM  36  
YRM  H10  H10  H  0  1  N  N  N  -33.754  -25.605  -37.296  -0.678  -1.611  -1.037  H10  YRM  37  
YRM  H11  H11  H  0  1  N  N  N  -32.988  -26.406  -38.710  -2.113  -1.986  -2.021  H11  YRM  38  
YRM  H12  H12  H  0  1  N  N  N  -34.143  -27.316  -37.679  -0.865  -0.884  -2.650  H12  YRM  39  
YRM  H13  H13  H  0  1  N  N  N  -32.709  -29.887  -29.771   4.956   0.592  -0.179  H13  YRM  40  
YRM  H14  H14  H  0  1  N  N  N  -33.982  -27.086  -32.720   1.287  -1.528   0.306  H14  YRM  41  
YRM  H15  H15  H  0  1  N  N  N  -29.513  -28.845  -33.970   0.334   3.390   0.065  H15  YRM  42  
YRM  H16  H16  H  0  1  N  N  N  -30.186  -30.982  -30.380   4.519   3.498  -0.331  H16  YRM  43  
YRM  H17  H17  H  0  1  N  N  N  -32.224  -24.504  -35.720  -3.742  -2.347  -0.629  H17  YRM  44  
YRM  H18  H18  H  0  1  N  N  N  -30.050  -24.076  -39.225  -5.691   0.809   0.988  H18  YRM  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YRM  O22  C21  DOUB  N  N   1  
YRM  N20  C21  SING  N  N   2  
YRM  N20  C19  SING  N  N   3  
YRM  C21  C05  SING  N  N   4  
YRM  C09  C04  SING  N  N   5  
YRM  C19  O23  DOUB  N  N   6  
YRM  C19  N18  SING  N  N   7  
YRM  C08  C04  SING  N  N   8  
YRM  C05  C04  SING  N  N   9  
YRM  C05  N18  SING  N  N  10  
YRM  C05  C06  SING  N  N  11  
YRM  C04  C03  SING  N  N  12  
YRM  C06  C07  SING  N  N  13  
YRM  C03  N02  SING  N  N  14  
YRM  C07  N02  SING  N  N  15  
YRM  N02  C01  SING  N  N  16  
YRM  C01  N10  SING  Y  N  17  
YRM  C01  C14  DOUB  Y  N  18  
YRM  C15  N10  SING  Y  N  19  
YRM  C15  N16  DOUB  Y  N  20  
YRM  N10  C11  SING  Y  N  21  
YRM  C14  C13  SING  Y  N  22  
YRM  N16  C17  SING  Y  N  23  
YRM  C11  C17  DOUB  Y  N  24  
YRM  C11  C12  SING  Y  N  25  
YRM  F26  C24  SING  N  N  26  
YRM  C13  C12  DOUB  Y  N  27  
YRM  C13  C24  SING  N  N  28  
YRM  C24  F27  SING  N  N  29  
YRM  C24  F25  SING  N  N  30  
YRM  C03  H1   SING  N  N  31  
YRM  C03  H2   SING  N  N  32  
YRM  C06  H3   SING  N  N  33  
YRM  C06  H4   SING  N  N  34  
YRM  C07  H5   SING  N  N  35  
YRM  C07  H6   SING  N  N  36  
YRM  C08  H7   SING  N  N  37  
YRM  C08  H8   SING  N  N  38  
YRM  C08  H9   SING  N  N  39  
YRM  C09  H10  SING  N  N  40  
YRM  C09  H11  SING  N  N  41  
YRM  C09  H12  SING  N  N  42  
YRM  C12  H13  SING  N  N  43  
YRM  C14  H14  SING  N  N  44  
YRM  C15  H15  SING  N  N  45  
YRM  C17  H16  SING  N  N  46  
YRM  N18  H17  SING  N  N  47  
YRM  N20  H18  SING  N  N  48  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YRM  SMILES            ACDLabs               12.01  "FC(F)(F)c1cc(n2cncc2c1)N1CCC2(NC(=O)NC2=O)C(C)(C)C1"  
YRM  InChI             InChI                 1.03   "InChI=1S/C17H18F3N5O2/c1-15(2)8-24(4-3-16(15)13(26)22-14(27)23-16)12-6-10(17(18,19)20)5-11-7-21-9-25(11)12/h5-7,9H,3-4,8H2,1-2H3,(H2,22,23,26,27)/t16-/m1/s1"  
YRM  InChIKey          InChI                 1.03   UBMTZODMRPHSBC-MRXNPFEDSA-N  
YRM  SMILES_CANONICAL  CACTVS                3.385  "CC1(C)CN(CC[C@]12NC(=O)NC2=O)c3cc(cc4cncn34)C(F)(F)F"  
YRM  SMILES            CACTVS                3.385  "CC1(C)CN(CC[C]12NC(=O)NC2=O)c3cc(cc4cncn34)C(F)(F)F"  
YRM  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1(CN(CC[C@@]12C(=O)NC(=O)N2)c3cc(cc4n3cnc4)C(F)(F)F)C"  
YRM  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(CN(CCC12C(=O)NC(=O)N2)c3cc(cc4n3cnc4)C(F)(F)F)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YRM  "SYSTEMATIC NAME"  ACDLabs               12.01  "(5S)-6,6-dimethyl-8-[(4S)-7-(trifluoromethyl)imidazo[1,5-a]pyridin-5-yl]-1,3,8-triazaspiro[4.5]decane-2,4-dione"  
YRM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(5~{S})-6,6-dimethyl-8-[7-(trifluoromethyl)imidazo[1,5-a]pyridin-5-yl]-1,3,8-triazaspiro[4.5]decane-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YRM  "Create component"  2021-03-29  RCSB  
YRM  "Initial release"   2021-09-01  RCSB  
##
