data_XYM
#

_chem_comp.id                                   XYM
_chem_comp.name                                 "(2Z)-3-[(carboxymethyl)sulfanyl]-2-hydroxyprop-2-enoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C5 H6 O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(2Z)-2-hydroxy-3-(carboxymethylthio)propenoic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-02-05
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       178.163
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XYM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3ADQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XYM  OAA   OAA   O  0  1  N  N  N  32.977  -42.019  -14.643   4.451  -0.992   0.000  OAA   XYM   1  
XYM  OAB   OAB   O  0  1  N  N  N  27.431  -40.689  -15.611  -3.060  -1.688   0.000  OAB   XYM   2  
XYM  OAC   OAC   O  0  1  N  N  N  33.319  -41.243  -16.699   3.539   1.020  -0.000  OAC   XYM   3  
XYM  OAD   OAD   O  0  1  N  N  N  27.979  -42.872  -15.872  -4.299   0.160   0.000  OAD   XYM   4  
XYM  OAE   OAE   O  0  1  N  N  N  29.799  -42.375  -13.567  -1.959   1.642  -0.000  OAE   XYM   5  
XYM  CAF   CAF   C  0  1  N  N  N  29.978  -40.290  -14.669  -0.713  -0.353   0.000  CAF   XYM   6  
XYM  CAG   CAG   C  0  1  N  N  N  32.472  -39.761  -15.119   1.993  -0.758   0.000  CAG   XYM   7  
XYM  SAH   SAH   S  0  1  N  N  N  31.347  -39.993  -13.717   0.780   0.584  -0.000  SAH   XYM   8  
XYM  CAI   CAI   C  0  1  N  N  N  32.955  -41.130  -15.521   3.384  -0.178   0.000  CAI   XYM   9  
XYM  CAJ   CAJ   C  0  1  N  N  N  28.135  -41.713  -15.377  -3.105  -0.472   0.000  CAJ   XYM  10  
XYM  CAK   CAK   C  0  1  N  N  N  29.341  -41.488  -14.484  -1.908   0.280  -0.000  CAK   XYM  11  
XYM  HOAA  HOAA  H  0  0  N  N  N  33.323  -42.822  -15.014   5.323  -0.573   0.000  HOAA  XYM  12  
XYM  HOAD  HOAD  H  0  0  N  N  N  27.235  -42.867  -16.463  -5.060  -0.438   0.000  HOAD  XYM  13  
XYM  HOAE  HOAE  H  0  0  N  N  N  29.245  -43.147  -13.568  -2.856   2.003  -0.000  HOAE  XYM  14  
XYM  HAF   HAF   H  0  1  N  N  N  29.624  -39.567  -15.389  -0.673  -1.432   0.000  HAF   XYM  15  
XYM  HAG   HAG   H  0  1  N  N  N  31.946  -39.279  -15.956   1.856  -1.372   0.890  HAG   XYM  16  
XYM  HAGA  HAGA  H  0  0  N  N  N  33.321  -39.126  -14.827   1.856  -1.372  -0.890  HAGA  XYM  17  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XYM  OAA  CAI   SING  N  N   1  
XYM  OAB  CAJ   DOUB  N  N   2  
XYM  OAC  CAI   DOUB  N  N   3  
XYM  OAD  CAJ   SING  N  N   4  
XYM  OAE  CAK   SING  N  N   5  
XYM  CAF  SAH   SING  N  N   6  
XYM  CAF  CAK   DOUB  N  N   7  
XYM  CAG  SAH   SING  N  N   8  
XYM  CAG  CAI   SING  N  N   9  
XYM  CAJ  CAK   SING  N  Z  10  
XYM  OAA  HOAA  SING  N  N  11  
XYM  OAD  HOAD  SING  N  N  12  
XYM  OAE  HOAE  SING  N  N  13  
XYM  CAF  HAF   SING  N  N  14  
XYM  CAG  HAG   SING  N  N  15  
XYM  CAG  HAGA  SING  N  N  16  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XYM  SMILES_CANONICAL  CACTVS                3.352  "OC(=O)CS\C=C(/O)C(O)=O"  
XYM  SMILES            CACTVS                3.352  "OC(=O)CSC=C(O)C(O)=O"  
XYM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C(C(=O)O)S/C=C(/C(=O)O)\O"  
XYM  SMILES            "OpenEye OEToolkits"  1.7.0  "C(C(=O)O)SC=C(C(=O)O)O"  
XYM  InChI             InChI                 1.03   "InChI=1S/C5H6O5S/c6-3(5(9)10)1-11-2-4(7)8/h1,6H,2H2,(H,7,8)(H,9,10)/b3-1-"  
XYM  InChIKey          InChI                 1.03   IXLZHTPCCBDKBW-IWQZZHSRSA-N  
#
_pdbx_chem_comp_identifier.comp_id          XYM
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  1.6.1
_pdbx_chem_comp_identifier.identifier       "(Z)-3-(carboxymethylsulfanyl)-2-hydroxy-prop-2-enoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XYM  "Create component"   2010-02-05  PDBJ  
XYM  "Modify descriptor"  2011-06-04  RCSB  
XYM  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     XYM
_pdbx_chem_comp_synonyms.name        "(2Z)-2-hydroxy-3-(carboxymethylthio)propenoic acid"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
