data_U2M
# 
_chem_comp.id                                    U2M 
_chem_comp.name                                  "(2S)-2-amino-7-sulfanylheptanoic acid" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C7 H15 N O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-04-09 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        177.264 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     U2M 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6WHQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
U2M N   N   N 0 1 N N N Y Y N 73.696 32.008 -1.275 -2.490 1.801  -0.157 N   U2M 1  
U2M CA  CA  C 0 1 N N S Y N N 72.687 32.698 -1.571 -2.480 0.368  -0.477 CA  U2M 2  
U2M C   C   C 0 1 N N N Y N Y 72.787 34.009 -1.466 -3.768 -0.260 -0.012 C   U2M 3  
U2M O   O   O 0 1 N N N Y N Y 72.242 34.716 -2.245 -4.440 0.291  0.828  O   U2M 4  
U2M CB  CB  C 0 1 N N N N N N 71.556 32.264 -0.635 -1.301 -0.305 0.228  CB  U2M 5  
U2M CG  CG  C 0 1 N N N N N N 70.463 31.541 -1.413 0.011  0.245  -0.335 CG  U2M 6  
U2M CD  CD  C 0 1 N N N N N N 69.534 30.858 -0.412 1.191  -0.427 0.371  CD  U2M 7  
U2M CE  CE  C 0 1 N N N N N N 68.093 31.041 -0.876 2.503  0.123  -0.192 CE  U2M 8  
U2M CZ  CZ  C 0 1 N N N N N N 67.270 29.837 -0.434 3.682  -0.549 0.514  CZ  U2M 9  
U2M SH  SH  S 0 1 N N N N N N 65.801 29.878 -1.060 5.238  0.103  -0.154 SH  U2M 10 
U2M H   H1  H 0 1 N N N Y Y N 73.485 31.038 -1.398 -2.581 1.949  0.837  H1  U2M 11 
U2M H2  H2  H 0 1 N Y N Y Y N 74.459 32.261 -1.870 -1.665 2.258  -0.517 H2  U2M 12 
U2M HA  H4  H 0 1 N N N Y N N 72.353 32.449 -2.589 -2.381 0.237  -1.555 H4  U2M 13 
U2M H6  H6  H 0 1 N N N N N N 71.961 31.588 0.132  -1.352 -0.098 1.298  H6  U2M 14 
U2M H7  H7  H 0 1 N N N N N N 71.127 33.153 -0.150 -1.344 -1.381 0.064  H7  U2M 15 
U2M H8  H8  H 0 1 N N N N N N 69.894 32.265 -2.015 0.062  0.039  -1.404 H8  U2M 16 
U2M H9  H9  H 0 1 N N N N N N 70.914 30.788 -2.076 0.055  1.322  -0.170 H9  U2M 17 
U2M H10 H10 H 0 1 N N N N N N 69.772 29.785 -0.359 1.140  -0.221 1.440  H10 U2M 18 
U2M H11 H11 H 0 1 N N N N N N 69.663 31.312 0.582  1.147  -1.503 0.206  H11 U2M 19 
U2M H12 H12 H 0 1 N N N N N N 68.067 31.123 -1.973 2.554  -0.083 -1.261 H12 U2M 20 
U2M H13 H13 H 0 1 N N N N N N 67.676 31.956 -0.430 2.546  1.200  -0.027 H13 U2M 21 
U2M H14 H14 H 0 1 N N N N N N 67.192 29.839 0.663  3.631  -0.343 1.583  H14 U2M 22 
U2M H15 H15 H 0 1 N N N N N N 67.775 28.917 -0.764 3.639  -1.625 0.349  H15 U2M 23 
U2M H16 H16 H 0 1 N N N N N N 65.271 28.794 -0.576 6.171  -0.565 0.547  H16 U2M 24 
U2M OXT OXT O 0 1 N Y N Y N Y 73.496 34.467 -0.441 -4.170 -1.432 -0.529 OXT U2M 25 
U2M HXT HXT H 0 1 N Y N Y N Y 73.486 35.417 -0.448 -5.003 -1.796 -0.199 HXT U2M 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
U2M O   C   DOUB N N 1  
U2M CA  C   SING N N 2  
U2M CA  N   SING N N 3  
U2M CA  CB  SING N N 4  
U2M CG  CB  SING N N 5  
U2M CG  CD  SING N N 6  
U2M SH  CZ  SING N N 7  
U2M CE  CZ  SING N N 8  
U2M CE  CD  SING N N 9  
U2M N   H   SING N N 10 
U2M N   H2  SING N N 11 
U2M CA  HA  SING N N 12 
U2M CB  H6  SING N N 13 
U2M CB  H7  SING N N 14 
U2M CG  H8  SING N N 15 
U2M CG  H9  SING N N 16 
U2M CD  H10 SING N N 17 
U2M CD  H11 SING N N 18 
U2M CE  H12 SING N N 19 
U2M CE  H13 SING N N 20 
U2M CZ  H14 SING N N 21 
U2M CZ  H15 SING N N 22 
U2M SH  H16 SING N N 23 
U2M C   OXT SING N N 24 
U2M OXT HXT SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
U2M SMILES           ACDLabs              12.01 "NC(C(O)=O)CCCCCS"                                                              
U2M InChI            InChI                1.03  "InChI=1S/C7H15NO2S/c8-6(7(9)10)4-2-1-3-5-11/h6,11H,1-5,8H2,(H,9,10)/t6-/m0/s1" 
U2M InChIKey         InChI                1.03  QICNSJMVLZSQPX-LURJTMIESA-N                                                     
U2M SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CCCCCS)C(O)=O"                                                         
U2M SMILES           CACTVS               3.385 "N[CH](CCCCCS)C(O)=O"                                                           
U2M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CC[C@@H](C(=O)O)N)CCS"                                                       
U2M SMILES           "OpenEye OEToolkits" 2.0.7 "C(CCC(C(=O)O)N)CCS"                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
U2M "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-2-amino-7-sulfanylheptanoic acid"      
U2M "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-azanyl-7-sulfanyl-heptanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
U2M "Create component"         2020-04-09 RCSB 
U2M "Modify leaving atom flag" 2020-04-09 RCSB 
U2M "Initial release"          2021-04-21 RCSB 
U2M "Modify backbone"          2023-11-03 PDBE 
U2M "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            U2M 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
