data_KPM
# 
_chem_comp.id                                    KPM 
_chem_comp.name                                  "2-(acetylamino)-4-O-{2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranosyl}-2-deoxy-beta-D-glucopyranose" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H30 N2 O13" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-12-06 
_chem_comp.pdbx_modified_date                    2018-03-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        494.447 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KPM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BT4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KPM C1  C1  C 0 1 N N N -9.802  -31.845 -24.048 6.639  -2.912 -1.776 C1  KPM 1  
KPM C2  C2  C 0 1 N N N -9.213  -30.756 -24.896 5.714  -2.333 -0.737 C2  KPM 2  
KPM O1  O1  O 0 1 N N N -7.999  -30.638 -25.060 5.727  -2.767 0.395  O1  KPM 3  
KPM N1  N1  N 0 1 N N N -10.087 -29.922 -25.462 4.872  -1.334 -1.066 N1  KPM 4  
KPM C3  C3  C 0 1 N N R -9.689  -28.853 -26.361 3.973  -0.771 -0.056 C3  KPM 5  
KPM C4  C4  C 0 1 N N R -10.186 -29.129 -27.777 4.707  0.315  0.735  C4  KPM 6  
KPM O2  O2  O 0 1 N N N -9.667  -30.357 -28.218 5.815  -0.265 1.425  O2  KPM 7  
KPM O3  O3  O 0 1 N N N -9.782  -28.070 -28.641 3.811  0.902  1.680  O3  KPM 8  
KPM C5  C5  C 0 1 N N R -10.325 -26.797 -28.262 2.674  1.537  1.090  C5  KPM 9  
KPM C6  C6  C 0 1 N N N -9.905  -25.817 -29.330 1.805  2.151  2.190  C6  KPM 10 
KPM O4  O4  O 0 1 N N N -10.253 -26.288 -30.623 2.530  3.196  2.842  O4  KPM 11 
KPM C7  C7  C 0 1 N N S -9.831  -26.428 -26.870 1.858  0.500  0.314  C7  KPM 12 
KPM O5  O5  O 0 1 N N N -10.434 -25.178 -26.496 0.753  1.142  -0.324 O5  KPM 13 
KPM C8  C8  C 0 1 N N S -9.669  -24.236 -25.785 -0.483 1.009  0.380  C8  KPM 14 
KPM O6  O6  O 0 1 N N N -9.911  -24.384 -24.399 -0.924 -0.351 0.312  O6  KPM 15 
KPM C9  C9  C 0 1 N N R -9.270  -23.365 -23.621 -2.149 -0.584 1.004  C9  KPM 16 
KPM C10 C10 C 0 1 N N N -9.595  -23.568 -22.162 -2.549 -2.058 0.942  C10 KPM 17 
KPM O7  O7  O 0 1 N N N -9.074  -22.482 -21.381 -3.833 -2.203 1.562  O7  KPM 18 
KPM C11 C11 C 0 1 N N S -9.464  -21.198 -21.836 -4.861 -1.398 0.983  C11 KPM 19 
KPM C12 C12 C 0 1 N N N -8.639  -20.190 -21.059 -6.160 -1.591 1.770  C12 KPM 20 
KPM O8  O8  O 0 1 N N N -9.150  -21.017 -23.200 -4.486 -0.017 1.022  O8  KPM 21 
KPM C13 C13 C 0 1 N N S -9.774  -21.994 -24.042 -3.257 0.248  0.346  C13 KPM 22 
KPM C14 C14 C 0 1 N N R -9.449  -21.694 -25.497 -2.882 1.727  0.444  C14 KPM 23 
KPM O9  O9  O 0 1 N N N -10.061 -20.468 -25.890 -3.881 2.520  -0.201 O9  KPM 24 
KPM C15 C15 C 0 1 N N S -10.103 -22.848 -26.254 -1.529 1.930  -0.250 C15 KPM 25 
KPM N2  N2  N 0 1 N N N -11.550 -22.734 -26.206 -1.659 1.617  -1.675 N2  KPM 26 
KPM C16 C16 C 0 1 N N N -12.339 -22.972 -27.255 -0.817 2.175  -2.567 C16 KPM 27 
KPM C17 C17 C 0 1 N N N -13.810 -23.054 -26.964 -0.952 1.854  -4.033 C17 KPM 28 
KPM O10 O10 O 0 1 N N N -11.889 -23.133 -28.385 0.048  2.937  -2.190 O10 KPM 29 
KPM C18 C18 C 0 1 N N N -10.963 -20.829 -21.686 -5.078 -1.817 -0.448 C18 KPM 30 
KPM O11 O11 O 0 1 N N N -11.669 -21.553 -20.859 -5.547 -3.044 -0.725 O11 KPM 31 
KPM O12 O12 O 0 1 N N N -11.432 -19.891 -22.323 -4.828 -1.049 -1.347 O12 KPM 32 
KPM C19 C19 C 0 1 N N R -10.215 -27.505 -25.864 2.752  -0.153 -0.745 C19 KPM 33 
KPM O13 O13 O 0 1 N N N -9.633  -27.224 -24.594 2.019  -1.174 -1.425 O13 KPM 34 
KPM H1  H1  H 0 1 N N N -8.994  -32.467 -23.636 7.239  -3.704 -1.328 H1  KPM 35 
KPM H2  H2  H 0 1 N N N -10.377 -31.397 -23.224 6.052  -3.322 -2.598 H2  KPM 36 
KPM H3  H3  H 0 1 N N N -10.467 -32.469 -24.663 7.296  -2.129 -2.155 H3  KPM 37 
KPM H4  H4  H 0 1 N N N -11.059 -30.038 -25.258 4.862  -0.987 -1.972 H4  KPM 38 
KPM H5  H5  H 0 1 N N N -8.591  -28.800 -26.390 3.648  -1.560 0.622  H5  KPM 39 
KPM H6  H6  H 0 1 N N N -11.285 -29.179 -27.749 5.067  1.083  0.050  H6  KPM 40 
KPM H7  H7  H 0 1 N N N -9.947  -31.049 -27.630 6.327  0.366  1.948  H7  KPM 41 
KPM H8  H8  H 0 1 N N N -11.424 -26.851 -28.242 3.007  2.320  0.410  H8  KPM 42 
KPM H9  H9  H 0 1 N N N -8.815  -25.677 -29.280 0.896  2.559  1.749  H9  KPM 43 
KPM H10 H10 H 0 1 N N N -10.407 -24.855 -29.151 1.542  1.382  2.917  H10 KPM 44 
KPM H11 H11 H 0 1 N N N -9.979  -25.655 -31.276 2.039  3.631  3.552  H11 KPM 45 
KPM H12 H12 H 0 1 N N N -8.736  -26.331 -26.892 1.490  -0.262 1.001  H12 KPM 46 
KPM H13 H13 H 0 1 N N N -8.599  -24.365 -26.003 -0.337 1.289  1.423  H13 KPM 47 
KPM H14 H14 H 0 1 N N N -8.180  -23.407 -23.760 -2.040 -0.281 2.045  H14 KPM 48 
KPM H15 H15 H 0 1 N N N -10.687 -23.615 -22.036 -2.605 -2.380 -0.098 H15 KPM 49 
KPM H16 H16 H 0 1 N N N -9.146  -24.511 -21.818 -1.814 -2.661 1.474  H16 KPM 50 
KPM H17 H17 H 0 1 N N N -8.850  -20.293 -19.984 -6.451 -2.641 1.737  H17 KPM 51 
KPM H18 H18 H 0 1 N N N -7.570  -20.373 -21.241 -6.005 -1.289 2.805  H18 KPM 52 
KPM H19 H19 H 0 1 N N N -8.898  -19.173 -21.388 -6.947 -0.982 1.327  H19 KPM 53 
KPM H20 H20 H 0 1 N N N -10.866 -21.962 -23.909 -3.351 -0.035 -0.702 H20 KPM 54 
KPM H21 H21 H 0 1 N N N -8.361  -21.688 -25.661 -2.804 2.016  1.492  H21 KPM 55 
KPM H22 H22 H 0 1 N N N -9.657  -19.747 -25.421 -3.704 3.470  -0.176 H22 KPM 56 
KPM H23 H23 H 0 1 N N N -9.794  -22.756 -27.306 -1.215 2.968  -0.133 H23 KPM 57 
KPM H24 H24 H 0 1 N N N -11.976 -22.463 -25.343 -2.352 1.008  -1.976 H24 KPM 58 
KPM H25 H25 H 0 1 N N N -14.357 -23.270 -27.894 -1.630 2.567  -4.501 H25 KPM 59 
KPM H26 H26 H 0 1 N N N -13.995 -23.857 -26.235 0.027  1.916  -4.510 H26 KPM 60 
KPM H27 H27 H 0 1 N N N -14.156 -22.095 -26.550 -1.349 0.845  -4.149 H27 KPM 61 
KPM H28 H28 H 0 1 N N N -12.564 -21.235 -20.844 -5.669 -3.267 -1.658 H28 KPM 62 
KPM H29 H29 H 0 1 N N N -11.311 -27.553 -25.785 3.080  0.601  -1.460 H29 KPM 63 
KPM H30 H30 H 0 1 N N N -9.879  -27.902 -23.975 2.527  -1.635 -2.107 H30 KPM 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KPM O4  C6  SING N N 1  
KPM C6  C5  SING N N 2  
KPM O3  C5  SING N N 3  
KPM O3  C4  SING N N 4  
KPM O10 C16 DOUB N N 5  
KPM C5  C7  SING N N 6  
KPM O2  C4  SING N N 7  
KPM C4  C3  SING N N 8  
KPM C16 C17 SING N N 9  
KPM C16 N2  SING N N 10 
KPM C7  O5  SING N N 11 
KPM C7  C19 SING N N 12 
KPM O5  C8  SING N N 13 
KPM C3  C19 SING N N 14 
KPM C3  N1  SING N N 15 
KPM C15 N2  SING N N 16 
KPM C15 C8  SING N N 17 
KPM C15 C14 SING N N 18 
KPM O9  C14 SING N N 19 
KPM C19 O13 SING N N 20 
KPM C8  O6  SING N N 21 
KPM C14 C13 SING N N 22 
KPM N1  C2  SING N N 23 
KPM O1  C2  DOUB N N 24 
KPM C2  C1  SING N N 25 
KPM O6  C9  SING N N 26 
KPM C13 C9  SING N N 27 
KPM C13 O8  SING N N 28 
KPM C9  C10 SING N N 29 
KPM O8  C11 SING N N 30 
KPM O12 C18 DOUB N N 31 
KPM C10 O7  SING N N 32 
KPM C11 C18 SING N N 33 
KPM C11 O7  SING N N 34 
KPM C11 C12 SING N N 35 
KPM C18 O11 SING N N 36 
KPM C1  H1  SING N N 37 
KPM C1  H2  SING N N 38 
KPM C1  H3  SING N N 39 
KPM N1  H4  SING N N 40 
KPM C3  H5  SING N N 41 
KPM C4  H6  SING N N 42 
KPM O2  H7  SING N N 43 
KPM C5  H8  SING N N 44 
KPM C6  H9  SING N N 45 
KPM C6  H10 SING N N 46 
KPM O4  H11 SING N N 47 
KPM C7  H12 SING N N 48 
KPM C8  H13 SING N N 49 
KPM C9  H14 SING N N 50 
KPM C10 H15 SING N N 51 
KPM C10 H16 SING N N 52 
KPM C12 H17 SING N N 53 
KPM C12 H18 SING N N 54 
KPM C12 H19 SING N N 55 
KPM C13 H20 SING N N 56 
KPM C14 H21 SING N N 57 
KPM O9  H22 SING N N 58 
KPM C15 H23 SING N N 59 
KPM N2  H24 SING N N 60 
KPM C17 H25 SING N N 61 
KPM C17 H26 SING N N 62 
KPM C17 H27 SING N N 63 
KPM O11 H28 SING N N 64 
KPM C19 H29 SING N N 65 
KPM O13 H30 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KPM SMILES           ACDLabs              12.01 "CC(=O)NC1C(C(C(OC1O)CO)OC3OC2COC(C(O)=O)(C)OC2C(O)C3NC(C)=O)O" 
KPM InChI            InChI                1.03  
"InChI=1S/C19H30N2O13/c1-6(23)20-10-12(25)14(8(4-22)31-16(10)27)33-17-11(21-7(2)24)13(26)15-9(32-17)5-30-19(3,34-15)18(28)29/h8-17,22,25-27H,4-5H2,1-3H3,(H,20,23)(H,21,24)(H,28,29)/t8-,9-,10-,11+,12-,13-,14-,15-,16-,17+,19+/m1/s1" 
KPM InChIKey         InChI                1.03  ZDEWQEOMIIQXJL-JRZDJGMASA-N 
KPM SMILES_CANONICAL CACTVS               3.385 "CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@@H](O[C@@H]2O[C@@H]3CO[C@@](C)(O[C@H]3[C@H](O)[C@@H]2NC(C)=O)C(O)=O)[C@@H]1O" 
KPM SMILES           CACTVS               3.385 "CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O[CH]2O[CH]3CO[C](C)(O[CH]3[CH](O)[CH]2NC(C)=O)C(O)=O)[CH]1O" 
KPM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O[C@H]2[C@H]([C@H]([C@H]3[C@H](O2)CO[C@](O3)(C)C(=O)O)O)NC(=O)C)O" 
KPM SMILES           "OpenEye OEToolkits" 2.0.6 "CC(=O)NC1C(C(C(OC1O)CO)OC2C(C(C3C(O2)COC(O3)(C)C(=O)O)O)NC(=O)C)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KPM "SYSTEMATIC NAME" ACDLabs              12.01 "2-(acetylamino)-4-O-{2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranosyl}-2-deoxy-beta-D-glucopyranose" 
KPM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"(2~{S},4~{a}~{R},6~{S},7~{S},8~{R},8~{a}~{S})-7-acetamido-6-[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-acetamido-2-(hydroxymethyl)-4,6-bis(oxidanyl)oxan-3-yl]oxy-2-methyl-8-oxidanyl-4,4~{a},6,7,8,8~{a}-hexahydropyrano[3,2-d][1,3]dioxine-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KPM "Create component" 2017-12-06 RCSB 
KPM "Initial release"  2018-03-21 RCSB 
# 
