data_JHM
#

_chem_comp.id                                   JHM
_chem_comp.name                                 2-deoxy-6-O-sulfo-alpha-D-glucopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2-deoxy-6-O-sulfo-alpha-D-arabino-hexopyranose; 2-deoxy-6-O-sulfo-alpha-D-glucose; 2-deoxy-6-O-sulfo-D-glucose;
2-deoxy-6-O-sulfo-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-09-27
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       244.220
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JHM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3OFL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  JHM  2-deoxy-6-O-sulfo-alpha-D-arabino-hexopyranose  PDB  ?  
2  JHM  2-deoxy-6-O-sulfo-alpha-D-glucose               PDB  ?  
3  JHM  2-deoxy-6-O-sulfo-D-glucose                     PDB  ?  
4  JHM  2-deoxy-6-O-sulfo-glucose                       PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JHM  S    S    S  0  1  N  N  N  -39.774  43.192   -8.992  -3.084  -0.041  -0.058  S    JHM   1  
JHM  C1   C1   C  0  1  N  N  S  -39.295  39.115   -5.210   2.237   1.797   0.321  C1   JHM   2  
JHM  O1   O1   O  0  1  N  Y  N  -39.468  39.366   -3.795   2.349   2.135  -1.063  O1   JHM   3  
JHM  C2   C2   C  0  1  N  N  N  -37.855  38.706   -5.474   3.349   0.815   0.698  C2   JHM   4  
JHM  C3   C3   C  0  1  N  N  R  -36.968  39.851   -4.980   3.177  -0.475  -0.110  C3   JHM   5  
JHM  O3   O3   O  0  1  N  N  N  -35.619  39.500   -5.145   4.169  -1.424   0.287  O3   JHM   6  
JHM  C4   C4   C  0  1  N  N  S  -37.293  41.093   -5.851   1.781  -1.047   0.154  C4   JHM   7  
JHM  O4   O4   O  0  1  N  N  N  -36.528  42.198   -5.430   1.583  -2.211  -0.650  O4   JHM   8  
JHM  C5   C5   C  0  1  N  N  R  -38.803  41.407   -5.634   0.730   0.007  -0.202  C5   JHM   9  
JHM  O5   O5   O  0  1  N  N  N  -39.616  40.276   -5.954   0.966   1.191   0.562  O5   JHM  10  
JHM  C6   C6   C  0  1  N  N  N  -39.362  42.574   -6.446  -0.665  -0.536   0.115  C6   JHM  11  
JHM  O6   O6   O  0  1  N  N  N  -39.301  42.259   -7.815  -1.652   0.399  -0.325  O6   JHM  12  
JHM  O7   O7   O  0  1  N  N  N  -41.213  43.047   -9.047  -3.126  -1.440  -0.303  O7   JHM  13  
JHM  O8   O8   O  0  1  N  N  N  -39.364  44.532   -8.622  -3.342   0.142   1.431  O8   JHM  14  
JHM  O9   O9   O  0  1  N  N  N  -39.102  42.720  -10.185  -3.921   0.892  -0.728  O9   JHM  15  
JHM  H1   H1   H  0  1  N  N  N  -39.969  38.303   -5.522   2.330   2.700   0.924  H1   JHM  16  
JHM  HO1  HO1  H  0  1  N  Y  N  -39.250  38.582   -3.305   1.675   2.755  -1.373  HO1  JHM  17  
JHM  H2   H2   H  0  1  N  N  N  -37.616  37.778   -4.934   4.319   1.259   0.474  H2   JHM  18  
JHM  H2A  H2A  H  0  1  N  N  N  -37.697  38.537   -6.549   3.289   0.588   1.763  H2A  JHM  19  
JHM  H3   H3   H  0  1  N  N  N  -37.151  40.061   -3.916   3.287  -0.256  -1.172  H3   JHM  20  
JHM  HO3  HO3  H  0  1  N  Y  N  -35.067  40.210   -4.839   5.078  -1.123   0.153  HO3  JHM  21  
JHM  H4   H4   H  0  1  N  N  N  -37.064  40.897   -6.909   1.690  -1.312   1.208  H4   JHM  22  
JHM  HO4  HO4  H  0  1  N  Y  N  -36.735  42.952   -5.970   2.218  -2.920  -0.481  HO4  JHM  23  
JHM  H5   H5   H  0  1  N  N  N  -38.844  41.680   -4.569   0.796   0.241  -1.265  H5   JHM  24  
JHM  H61  H6   H  0  1  N  N  N  -40.408  42.756   -6.157  -0.810  -1.487  -0.399  H61  JHM  25  
JHM  H62  H6A  H  0  1  N  N  N  -38.766  43.477   -6.250  -0.760  -0.686   1.191  H62  JHM  26  
JHM  HO8  HO8  H  0  1  N  N  N  -38.721  44.850   -9.245  -4.232  -0.111   1.710  HO8  JHM  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JHM  O9  S    DOUB  N  N   1  
JHM  O7  S    DOUB  N  N   2  
JHM  S   O8   SING  N  N   3  
JHM  S   O6   SING  N  N   4  
JHM  O5  C1   SING  N  N   5  
JHM  C2  C1   SING  N  N   6  
JHM  C1  O1   SING  N  N   7  
JHM  C1  H1   SING  N  N   8  
JHM  O1  HO1  SING  N  N   9  
JHM  C2  C3   SING  N  N  10  
JHM  C2  H2   SING  N  N  11  
JHM  C2  H2A  SING  N  N  12  
JHM  C4  C3   SING  N  N  13  
JHM  O3  C3   SING  N  N  14  
JHM  C3  H3   SING  N  N  15  
JHM  O3  HO3  SING  N  N  16  
JHM  C4  C5   SING  N  N  17  
JHM  C4  O4   SING  N  N  18  
JHM  C4  H4   SING  N  N  19  
JHM  O4  HO4  SING  N  N  20  
JHM  C6  C5   SING  N  N  21  
JHM  O5  C5   SING  N  N  22  
JHM  C5  H5   SING  N  N  23  
JHM  O6  C6   SING  N  N  24  
JHM  C6  H61  SING  N  N  25  
JHM  C6  H62  SING  N  N  26  
JHM  O8  HO8  SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JHM  SMILES            ACDLabs               12.01  "O=S(=O)(O)OCC1OC(O)CC(O)C1O"  
JHM  SMILES_CANONICAL  CACTVS                3.370  "O[C@@H]1C[C@@H](O)[C@H](O)[C@@H](CO[S](O)(=O)=O)O1"  
JHM  SMILES            CACTVS                3.370  "O[CH]1C[CH](O)[CH](O)[CH](CO[S](O)(=O)=O)O1"  
JHM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C1[C@H]([C@@H]([C@H](O[C@@H]1O)COS(=O)(=O)O)O)O"  
JHM  SMILES            "OpenEye OEToolkits"  1.7.0  "C1C(C(C(OC1O)COS(=O)(=O)O)O)O"  
JHM  InChI             InChI                 1.03   "InChI=1S/C6H12O8S/c7-3-1-5(8)14-4(6(3)9)2-13-15(10,11)12/h3-9H,1-2H2,(H,10,11,12)/t3-,4-,5+,6+/m1/s1"  
JHM  InChIKey          InChI                 1.03   GDISEEDIIABUSR-ZXXMMSQZSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JHM  "SYSTEMATIC NAME"            ACDLabs               12.01  2-deoxy-6-O-sulfo-alpha-D-arabino-hexopyranose  
JHM  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.7.0  "[(2R,3S,4R,6S)-3,4,6-trihydroxyoxan-2-yl]methyl hydrogen sulfate"  
JHM  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    a-D-2-deoxy-Glcp6SO3  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
JHM  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
JHM  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
JHM  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
JHM  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JHM  "Create component"          2010-09-27  RCSB  
JHM  "Modify descriptor"         2011-06-04  RCSB  
JHM  "Other modification"        2020-07-03  RCSB  
JHM  "Modify name"               2020-07-17  RCSB  
JHM  "Modify synonyms"           2020-07-17  RCSB  
JHM  "Modify internal type"      2020-07-17  RCSB  
JHM  "Modify linking type"       2020-07-17  RCSB  
JHM  "Modify atom id"            2020-07-17  RCSB  
JHM  "Modify component atom id"  2020-07-17  RCSB  
JHM  "Modify leaving atom flag"  2020-07-17  RCSB  
##
