data_JCM
# 
_chem_comp.id                                    JCM 
_chem_comp.name                                  "4-(4-azanylpyrimidin-2-yl)-N-[2-methyl-5-[4-[2-(4-methylpiperazin-1-yl)ethyl]phenyl]phenyl]-N-propyl-1,3-thiazol-2-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H37 N7 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-25 
_chem_comp.pdbx_modified_date                    2023-06-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        527.727 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JCM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZI7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JCM N1  N1  N 0 1 N N N -12.740 -32.427 10.267 2.968   -1.717 0.452  N1  JCM 1  
JCM N3  N2  N 0 1 N N N -10.125 -44.220 17.412 -9.602  2.841  0.234  N3  JCM 2  
JCM C4  C1  C 0 1 Y N N -12.350 -33.778 10.004 1.871   -2.352 -0.137 C4  JCM 3  
JCM C5  C2  C 0 1 Y N N -11.992 -34.609 11.061 0.586   -1.897 0.118  C5  JCM 4  
JCM C6  C3  C 0 1 Y N N -11.593 -35.921 10.820 -0.503  -2.533 -0.472 C6  JCM 5  
JCM C7  C4  C 0 1 Y N N -11.233 -36.811 11.959 -1.881  -2.051 -0.204 C7  JCM 6  
JCM C8  C5  C 0 1 Y N N -12.080 -36.964 13.051 -2.088  -0.957 0.634  C8  JCM 7  
JCM C10 C6  C 0 1 Y N N -10.545 -38.486 14.126 -4.451  -1.151 0.297  C10 JCM 8  
JCM C13 C7  C 0 1 N N N -10.177 -41.766 17.231 -7.661  1.601  1.064  C13 JCM 9  
JCM C15 C8  C 0 1 N N N -9.374  -45.388 17.882 -10.965 3.318  0.499  C15 JCM 10 
JCM C17 C9  C 0 1 N N N -11.109 -43.075 15.474 -8.091  1.697  -1.316 C17 JCM 11 
JCM C20 C10 C 0 1 Y N N -11.552 -36.362 9.500  -0.297  -3.623 -1.315 C20 JCM 12 
JCM C21 C11 C 0 1 Y N N -11.894 -35.531 8.448  0.986   -4.071 -1.564 C21 JCM 13 
JCM C22 C12 C 0 1 Y N N -12.291 -34.214 8.684  2.068   -3.437 -0.984 C22 JCM 14 
JCM C24 C13 C 0 1 Y N N -11.806 -31.473 10.307 3.551   -0.623 -0.168 C24 JCM 15 
JCM C26 C14 C 0 1 Y N N -11.029 -27.992 10.006 6.144   1.908  -0.046 C26 JCM 16 
JCM C28 C15 C 0 1 Y N N -11.215 -25.305 9.820  8.230   3.423  0.696  C28 JCM 17 
JCM C1  C16 C 0 1 N N N -16.280 -31.897 11.685 3.336   -1.989 4.213  C1  JCM 18 
JCM C2  C17 C 0 1 N N N -14.771 -32.140 11.702 2.875   -1.404 2.876  C2  JCM 19 
JCM C3  C18 C 0 1 N N N -14.189 -32.139 10.310 3.497   -2.203 1.729  C3  JCM 20 
JCM C9  C19 C 0 1 Y N N -11.744 -37.797 14.108 -3.372  -0.513 0.880  C9  JCM 21 
JCM C11 C20 C 0 1 N N N -10.192 -39.396 15.275 -5.850  -0.662 0.569  C11 JCM 22 
JCM C12 C21 C 0 1 N N N -11.040 -40.658 15.238 -6.234  0.390  -0.473 C12 JCM 23 
JCM N2  N3  N 0 1 N N N -10.358 -41.843 15.772 -7.598  0.867  -0.208 N2  JCM 24 
JCM C14 C22 C 0 1 N N N -9.428  -42.977 17.740 -9.109  2.011  1.342  C14 JCM 25 
JCM C16 C23 C 0 1 N N N -10.366 -44.294 15.973 -9.539  2.107  -1.038 C16 JCM 26 
JCM C18 C24 C 0 1 Y N N -9.691  -38.330 13.042 -4.251  -2.234 -0.540 C18 JCM 27 
JCM C19 C25 C 0 1 Y N N -10.026 -37.505 11.977 -2.971  -2.687 -0.793 C19 JCM 28 
JCM C23 C26 C 0 1 N N N -12.617 -33.317 7.557  3.465   -3.931 -1.260 C23 JCM 29 
JCM N4  N4  N 0 1 Y N N -12.099 -30.211 10.166 4.568   0.040  0.286  N4  JCM 30 
JCM C25 C27 C 0 1 Y N N -10.936 -29.442 10.120 4.994   1.067  -0.449 C25 JCM 31 
JCM N5  N5  N 0 1 Y N N -12.234 -27.425 10.154 6.779   1.635  1.087  N5  JCM 32 
JCM C27 C28 C 0 1 Y N N -12.320 -26.095 10.040 7.812   2.365  1.480  C27 JCM 33 
JCM C29 C29 C 0 1 Y N N -9.995  -25.965 9.675  7.546   3.683  -0.494 C29 JCM 34 
JCM N6  N6  N 0 1 N N N -8.867  -25.292 9.432  7.935   4.730  -1.314 N6  JCM 35 
JCM N7  N7  N 0 1 Y N N -9.918  -27.297 9.760  6.518   2.912  -0.829 N7  JCM 36 
JCM C30 C30 C 0 1 Y N N -9.786  -30.159 10.295 4.304   1.286  -1.584 C30 JCM 37 
JCM S1  S1  S 0 1 Y N N -10.117 -31.853 10.358 3.030   0.074  -1.699 S1  JCM 38 
JCM H2  H2  H 0 1 N N N -12.024 -34.234 12.073 0.431   -1.052 0.772  H2  JCM 39 
JCM H3  H3  H 0 1 N N N -13.016 -36.425 13.077 -1.246  -0.458 1.090  H3  JCM 40 
JCM H4  H4  H 0 1 N N N -9.606  -40.858 17.477 -7.303  0.962  1.871  H4  JCM 41 
JCM H5  H5  H 0 1 N N N -11.163 -41.721 17.716 -7.036  2.492  1.001  H5  JCM 42 
JCM H6  H6  H 0 1 N N N -9.207  -45.306 18.966 -10.970 3.915  1.411  H6  JCM 43 
JCM H7  H7  H 0 1 N N N -9.947  -46.302 17.668 -11.306 3.930  -0.337 H7  JCM 44 
JCM H8  H8  H 0 1 N N N -8.404  -45.433 17.365 -11.632 2.464  0.620  H8  JCM 45 
JCM H9  H9  H 0 1 N N N -12.092 -43.026 15.966 -7.471  2.589  -1.406 H9  JCM 46 
JCM H10 H10 H 0 1 N N N -11.248 -43.158 14.386 -8.046  1.127  -2.244 H10 JCM 47 
JCM H11 H11 H 0 1 N N N -11.246 -37.377 9.292  -1.140  -4.119 -1.773 H11 JCM 48 
JCM H12 H12 H 0 1 N N N -11.853 -35.905 7.436  1.144   -4.913 -2.221 H12 JCM 49 
JCM H13 H13 H 0 1 N N N -11.289 -24.229 9.763  9.070   4.033  0.995  H13 JCM 50 
JCM H14 H14 H 0 1 N N N -16.665 -31.905 12.715 4.423   -1.933 4.278  H14 JCM 51 
JCM H15 H15 H 0 1 N N N -16.489 -30.921 11.223 2.893   -1.419 5.030  H15 JCM 52 
JCM H16 H16 H 0 1 N N N -16.772 -32.690 11.104 3.020   -3.030 4.282  H16 JCM 53 
JCM H17 H17 H 0 1 N N N -14.572 -33.115 12.171 1.789   -1.460 2.811  H17 JCM 54 
JCM H18 H18 H 0 1 N N N -14.289 -31.345 12.290 3.191   -0.363 2.807  H18 JCM 55 
JCM H19 H19 H 0 1 N N N -14.359 -31.148 9.864  3.250   -3.259 1.846  H19 JCM 56 
JCM H20 H20 H 0 1 N N N -14.712 -32.903 9.715  4.580   -2.079 1.744  H20 JCM 57 
JCM H21 H21 H 0 1 N N N -12.432 -37.910 14.933 -3.533  0.335  1.530  H21 JCM 58 
JCM H22 H22 H 0 1 N N N -9.130  -39.672 15.204 -6.545  -1.499 0.514  H22 JCM 59 
JCM H23 H23 H 0 1 N N N -10.371 -38.868 16.223 -5.893  -0.219 1.564  H23 JCM 60 
JCM H24 H24 H 0 1 N N N -11.949 -40.483 15.832 -5.539  1.227  -0.418 H24 JCM 61 
JCM H25 H25 H 0 1 N N N -11.318 -40.859 14.193 -6.192  -0.053 -1.469 H25 JCM 62 
JCM H27 H27 H 0 1 N N N -8.428  -42.997 17.281 -9.153  2.581  2.270  H27 JCM 63 
JCM H28 H28 H 0 1 N N N -9.329  -42.902 18.833 -9.729  1.119  1.432  H28 JCM 64 
JCM H29 H29 H 0 1 N N N -10.964 -45.191 15.756 -10.163 1.216  -0.975 H29 JCM 65 
JCM H30 H30 H 0 1 N N N -9.400  -44.362 15.451 -9.897  2.747  -1.845 H30 JCM 66 
JCM H31 H31 H 0 1 N N N -8.750  -38.860 13.027 -5.097  -2.727 -0.997 H31 JCM 67 
JCM H32 H32 H 0 1 N N N -9.340  -37.400 11.150 -2.816  -3.532 -1.447 H32 JCM 68 
JCM H33 H33 H 0 1 N N N -13.689 -33.394 7.324  3.902   -3.348 -2.071 H33 JCM 69 
JCM H34 H34 H 0 1 N N N -12.376 -32.280 7.832  4.074   -3.819 -0.363 H34 JCM 70 
JCM H35 H35 H 0 1 N N N -12.029 -33.609 6.674  3.429   -4.982 -1.546 H35 JCM 71 
JCM H36 H36 H 0 1 N N N -13.289 -25.626 10.123 8.322   2.135  2.404  H36 JCM 72 
JCM H37 H37 H 0 1 N N N -8.106  -25.935 9.349  7.456   4.905  -2.138 H37 JCM 73 
JCM H38 H38 H 0 1 N N N -8.963  -24.777 8.580  8.687   5.289  -1.062 H38 JCM 74 
JCM H39 H39 H 0 1 N N N -8.801  -29.724 10.382 4.500   2.068  -2.303 H39 JCM 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JCM C23 C22 SING N N 1  
JCM C21 C22 DOUB Y N 2  
JCM C21 C20 SING Y N 3  
JCM C22 C4  SING Y N 4  
JCM N6  C29 SING N N 5  
JCM C20 C6  DOUB Y N 6  
JCM C29 N7  DOUB Y N 7  
JCM C29 C28 SING Y N 8  
JCM N7  C26 SING Y N 9  
JCM C28 C27 DOUB Y N 10 
JCM C4  N1  SING N N 11 
JCM C4  C5  DOUB Y N 12 
JCM C26 C25 SING N N 13 
JCM C26 N5  DOUB Y N 14 
JCM C27 N5  SING Y N 15 
JCM C25 N4  SING Y N 16 
JCM C25 C30 DOUB Y N 17 
JCM N4  C24 DOUB Y N 18 
JCM N1  C24 SING N N 19 
JCM N1  C3  SING N N 20 
JCM C30 S1  SING Y N 21 
JCM C24 S1  SING Y N 22 
JCM C3  C2  SING N N 23 
JCM C6  C5  SING Y N 24 
JCM C6  C7  SING N N 25 
JCM C1  C2  SING N N 26 
JCM C7  C19 DOUB Y N 27 
JCM C7  C8  SING Y N 28 
JCM C19 C18 SING Y N 29 
JCM C18 C10 DOUB Y N 30 
JCM C8  C9  DOUB Y N 31 
JCM C9  C10 SING Y N 32 
JCM C10 C11 SING N N 33 
JCM C12 C11 SING N N 34 
JCM C12 N2  SING N N 35 
JCM C17 N2  SING N N 36 
JCM C17 C16 SING N N 37 
JCM N2  C13 SING N N 38 
JCM C16 N3  SING N N 39 
JCM C13 C14 SING N N 40 
JCM N3  C14 SING N N 41 
JCM N3  C15 SING N N 42 
JCM C5  H2  SING N N 43 
JCM C8  H3  SING N N 44 
JCM C13 H4  SING N N 45 
JCM C13 H5  SING N N 46 
JCM C15 H6  SING N N 47 
JCM C15 H7  SING N N 48 
JCM C15 H8  SING N N 49 
JCM C17 H9  SING N N 50 
JCM C17 H10 SING N N 51 
JCM C20 H11 SING N N 52 
JCM C21 H12 SING N N 53 
JCM C28 H13 SING N N 54 
JCM C1  H14 SING N N 55 
JCM C1  H15 SING N N 56 
JCM C1  H16 SING N N 57 
JCM C2  H17 SING N N 58 
JCM C2  H18 SING N N 59 
JCM C3  H19 SING N N 60 
JCM C3  H20 SING N N 61 
JCM C9  H21 SING N N 62 
JCM C11 H22 SING N N 63 
JCM C11 H23 SING N N 64 
JCM C12 H24 SING N N 65 
JCM C12 H25 SING N N 66 
JCM C14 H27 SING N N 67 
JCM C14 H28 SING N N 68 
JCM C16 H29 SING N N 69 
JCM C16 H30 SING N N 70 
JCM C18 H31 SING N N 71 
JCM C19 H32 SING N N 72 
JCM C23 H33 SING N N 73 
JCM C23 H34 SING N N 74 
JCM C23 H35 SING N N 75 
JCM C27 H36 SING N N 76 
JCM N6  H37 SING N N 77 
JCM N6  H38 SING N N 78 
JCM C30 H39 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JCM InChI            InChI                1.06  "InChI=1S/C30H37N7S/c1-4-14-37(30-33-26(21-38-30)29-32-13-11-28(31)34-29)27-20-25(8-5-22(27)2)24-9-6-23(7-10-24)12-15-36-18-16-35(3)17-19-36/h5-11,13,20-21H,4,12,14-19H2,1-3H3,(H2,31,32,34)" 
JCM InChIKey         InChI                1.06  QNERPEQPKFYEGH-UHFFFAOYSA-N                                                                                                                                                                    
JCM SMILES_CANONICAL CACTVS               3.385 "CCCN(c1scc(n1)c2nccc(N)n2)c3cc(ccc3C)c4ccc(CCN5CCN(C)CC5)cc4"                                                                                                                                 
JCM SMILES           CACTVS               3.385 "CCCN(c1scc(n1)c2nccc(N)n2)c3cc(ccc3C)c4ccc(CCN5CCN(C)CC5)cc4"                                                                                                                                 
JCM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCN(c1cc(ccc1C)c2ccc(cc2)CCN3CCN(CC3)C)c4nc(cs4)c5nccc(n5)N"                                                                                                                                 
JCM SMILES           "OpenEye OEToolkits" 2.0.7 "CCCN(c1cc(ccc1C)c2ccc(cc2)CCN3CCN(CC3)C)c4nc(cs4)c5nccc(n5)N"                                                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           JCM 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-(4-azanylpyrimidin-2-yl)-~{N}-[2-methyl-5-[4-[2-(4-methylpiperazin-1-yl)ethyl]phenyl]phenyl]-~{N}-propyl-1,3-thiazol-2-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JCM "Create component"  2022-04-25 PDBE 
JCM "Modify descriptor" 2022-08-22 RCSB 
JCM "Initial release"   2023-06-07 RCSB 
# 
