data_DLM
#

_chem_comp.id                                   DLM
_chem_comp.name                                 "3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)chromenium"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H11 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Delphinidin
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2014-10-15
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       303.244
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DLM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4REM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DLM  O12  O12  O  1  1  Y  N  N   2.979  -4.364  15.095   0.741   0.626   0.006  O12  DLM   1  
DLM  C11  C11  C  0  1  Y  N  N   2.071  -3.399  15.454  -0.012  -0.320  -0.007  C11  DLM   2  
DLM  C14  C14  C  0  1  Y  N  N   0.781  -3.390  14.699  -1.469  -0.067   0.000  C14  DLM   3  
DLM  C15  C15  C  0  1  Y  N  N  -0.153  -2.358  14.815  -2.156   0.028   1.212  C15  DLM   4  
DLM  C1   C1   C  0  1  Y  N  N   6.726  -4.662  17.026   4.746   0.365  -0.009  C1   DLM   5  
DLM  C2   C2   C  0  1  Y  N  N   5.874  -3.652  17.461   4.007  -0.785  -0.026  C2   DLM   6  
DLM  O21  O21  O  0  1  N  N  N  -2.247  -1.353  14.233  -4.190   0.348   2.396  O21  DLM   7  
DLM  O22  O22  O  0  1  N  N  N  -0.815  -5.649  12.277  -4.194   0.468  -2.368  O22  DLM   8  
DLM  C3   C3   C  0  1  Y  N  N   4.544  -3.509  16.809   2.603  -0.709  -0.021  C3   DLM   9  
DLM  C18  C18  C  0  1  Y  N  N  -0.617  -4.577  13.096  -3.520   0.326  -1.195  C18  DLM  10  
DLM  C19  C19  C  0  1  Y  N  N   0.545  -4.471  13.852  -2.159   0.084  -1.204  C19  DLM  11  
DLM  C17  C17  C  0  1  Y  N  N  -1.634  -3.504  13.190  -4.205   0.410   0.014  C17  DLM  12  
DLM  O24  O24  O  0  1  N  N  N  -2.787  -3.567  12.466  -5.546   0.633   0.021  O24  DLM  13  
DLM  C16  C16  C  0  1  Y  N  N  -1.350  -2.369  14.101  -3.518   0.266   1.216  C16  DLM  14  
DLM  C10  C10  C  0  1  Y  N  N   2.411  -2.433  16.550   0.441  -1.652  -0.031  C10  DLM  15  
DLM  O27  O27  O  0  1  N  N  N   1.550  -1.457  16.953  -0.436  -2.691  -0.046  O27  DLM  16  
DLM  C9   C9   C  0  1  Y  N  N   3.642  -2.525  17.191   1.801  -1.870  -0.038  C9   DLM  17  
DLM  C4   C4   C  0  1  Y  N  N   4.192  -4.454  15.723   1.957   0.552   0.002  C4   DLM  18  
DLM  C5   C5   C  0  1  Y  N  N   5.115  -5.427  15.359   2.744   1.714   0.018  C5   DLM  19  
DLM  C6   C6   C  0  1  Y  N  N   6.353  -5.529  15.998   4.118   1.612   0.013  C6   DLM  20  
DLM  O29  O29  O  0  1  N  N  N   7.222  -6.502  15.604   4.872   2.741   0.029  O29  DLM  21  
DLM  O30  O30  O  0  1  N  N  N   6.252  -2.812  18.464   4.626  -1.993  -0.047  O30  DLM  22  
DLM  H1   H1   H  0  1  N  N  N   0.058  -1.530  15.475  -1.624  -0.084   2.145  H1   DLM  23  
DLM  H2   H2   H  0  1  N  N  N   7.693  -4.777  17.492   5.825   0.309  -0.013  H2   DLM  24  
DLM  H3   H3   H  0  1  N  N  N  -1.913  -0.713  14.850  -4.529  -0.499   2.716  H3   DLM  25  
DLM  H4   H4   H  0  1  N  N  N  -0.071  -6.236  12.338  -4.243   1.380  -2.685  H4   DLM  26  
DLM  H5   H5   H  0  1  N  N  N   1.288  -5.251  13.781  -1.629   0.011  -2.143  H5   DLM  27  
DLM  H6   H6   H  0  1  N  N  N  -3.318  -2.801  12.649  -6.079  -0.174   0.001  H6   DLM  28  
DLM  H7   H7   H  0  1  N  N  N   1.947  -0.953  17.653  -0.692  -2.977  -0.934  H7   DLM  29  
DLM  H8   H8   H  0  1  N  N  N   3.895  -1.834  17.982   2.225  -2.863  -0.056  H8   DLM  30  
DLM  H9   H9   H  0  1  N  N  N   4.870  -6.118  14.566   2.273   2.686   0.035  H9   DLM  31  
DLM  H10  H10  H  0  1  N  N  N   8.015  -6.449  16.124   5.094   3.053   0.917  H10  DLM  32  
DLM  H11  H11  H  0  1  N  N  N   7.123  -3.045  18.762   4.807  -2.358   0.830  H11  DLM  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DLM  O22  C18  SING  N  N   1  
DLM  O24  C17  SING  N  N   2  
DLM  C18  C17  DOUB  Y  N   3  
DLM  C18  C19  SING  Y  N   4  
DLM  C17  C16  SING  Y  N   5  
DLM  C19  C14  DOUB  Y  N   6  
DLM  C16  O21  SING  N  N   7  
DLM  C16  C15  DOUB  Y  N   8  
DLM  C14  C15  SING  Y  N   9  
DLM  C14  C11  SING  N  N  10  
DLM  O12  C11  DOUB  Y  N  11  
DLM  O12  C4   SING  Y  N  12  
DLM  C5   C4   DOUB  Y  N  13  
DLM  C5   C6   SING  Y  N  14  
DLM  C11  C10  SING  Y  N  15  
DLM  O29  C6   SING  N  N  16  
DLM  C4   C3   SING  Y  N  17  
DLM  C6   C1   DOUB  Y  N  18  
DLM  C10  O27  SING  N  N  19  
DLM  C10  C9   DOUB  Y  N  20  
DLM  C3   C9   SING  Y  N  21  
DLM  C3   C2   DOUB  Y  N  22  
DLM  C1   C2   SING  Y  N  23  
DLM  C2   O30  SING  N  N  24  
DLM  C15  H1   SING  N  N  25  
DLM  C1   H2   SING  N  N  26  
DLM  O21  H3   SING  N  N  27  
DLM  O22  H4   SING  N  N  28  
DLM  C19  H5   SING  N  N  29  
DLM  O24  H6   SING  N  N  30  
DLM  O27  H7   SING  N  N  31  
DLM  C9   H8   SING  N  N  32  
DLM  C5   H9   SING  N  N  33  
DLM  O29  H10  SING  N  N  34  
DLM  O30  H11  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DLM  SMILES            ACDLabs               12.01  "Oc1cc(cc(O)c1O)c3[o+]c2cc(O)cc(O)c2cc3O"  
DLM  InChI             InChI                 1.03   "InChI=1S/C15H10O7/c16-7-3-9(17)8-5-12(20)15(22-13(8)4-7)6-1-10(18)14(21)11(19)2-6/h1-5H,(H5-,16,17,18,19,20,21)/p+1"  
DLM  InChIKey          InChI                 1.03   JKHRCGUTYDNCLE-UHFFFAOYSA-O  
DLM  SMILES_CANONICAL  CACTVS                3.385  "Oc1cc(O)c2cc(O)c([o+]c2c1)c3cc(O)c(O)c(O)c3"  
DLM  SMILES            CACTVS                3.385  "Oc1cc(O)c2cc(O)c([o+]c2c1)c3cc(O)c(O)c(O)c3"  
DLM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "c1c(cc(c(c1O)O)O)c2c(cc3c(cc(cc3[o+]2)O)O)O"  
DLM  SMILES            "OpenEye OEToolkits"  1.7.6  "c1c(cc(c(c1O)O)O)c2c(cc3c(cc(cc3[o+]2)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DLM  "SYSTEMATIC NAME"  ACDLabs               12.01  "3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)chromenium"  
DLM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "2-[3,4,5-tris(oxidanyl)phenyl]chromenylium-3,5,7-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DLM  "Create component"  2014-10-15  PDBJ  
DLM  "Initial release"   2015-01-21  RCSB  
DLM  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     DLM
_pdbx_chem_comp_synonyms.name        Delphinidin
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
