data_A7M
#

_chem_comp.id                                   A7M
_chem_comp.name                                 "{1-[(2,5-dimethylphenyl)methyl]-1H-benzimidazol-2-yl}methanol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H18 N2 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-07-08
_chem_comp.pdbx_modified_date                   2019-12-20
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       266.338
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    A7M
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5WD0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A7M  C1   C1   C  0  1  Y  N  N  -11.059   1.827  -19.996   1.529  -0.393  -0.655  C1   A7M   1  
A7M  C2   C2   C  0  1  Y  N  N  -10.798   2.818  -19.104   2.545   0.438  -0.224  C2   A7M   2  
A7M  C3   C3   C  0  1  Y  N  N  -10.605   4.133  -19.545   3.599  -0.080   0.507  C3   A7M   3  
A7M  C4   C4   C  0  1  Y  N  N  -10.598   4.446  -20.910   3.635  -1.429   0.807  C4   A7M   4  
A7M  C5   C5   C  0  1  Y  N  N  -10.810   3.433  -21.833   2.618  -2.260   0.376  C5   A7M   5  
A7M  C6   C6   C  0  1  Y  N  N  -11.026   2.112  -21.376   1.562  -1.741  -0.350  C6   A7M   6  
A7M  C7   C7   C  0  1  N  N  N  -11.255   0.391  -19.528   0.381   0.171  -1.452  C7   A7M   7  
A7M  C9   C8   C  0  1  N  N  N  -11.284   0.964  -22.359   0.453  -2.648  -0.820  C9   A7M   8  
A7M  N10  N1   N  0  1  Y  N  N  -12.176   0.278  -18.399  -0.714   0.528  -0.546  N10  A7M   9  
A7M  C12  C9   C  0  1  Y  N  N  -13.951   0.353  -17.141  -2.585   0.502   0.657  C12  A7M  10  
A7M  C17  C10  C  0  1  Y  N  N  -15.291   0.609  -16.909  -3.779  -0.030   1.151  C17  A7M  11  
A7M  C18  C11  C  0  1  Y  N  N  -16.101   1.098  -17.922  -4.188  -1.271   0.751  C18  A7M  12  
A7M  C19  C12  C  0  1  Y  N  N  -15.573   1.371  -19.173  -3.428  -2.012  -0.144  C19  A7M  13  
A7M  C20  C13  C  0  1  Y  N  N  -14.240   1.118  -19.435  -2.249  -1.505  -0.647  C20  A7M  14  
A7M  O16  O1   O  0  1  N  N  N  -10.583  -1.121  -15.513  -0.209   3.736  -0.927  O16  A7M  15  
A7M  C15  C14  C  0  1  N  N  N  -10.512  -0.640  -16.837   0.152   2.827   0.115  C15  A7M  16  
A7M  C14  C15  C  0  1  Y  N  N  -11.880  -0.170  -17.179  -0.835   1.689   0.153  C14  A7M  17  
A7M  C11  C16  C  0  1  Y  N  N  -13.445   0.616  -18.410  -1.816  -0.248  -0.249  C11  A7M  18  
A7M  N13  N2   N  0  1  Y  N  N  -12.968  -0.149  -16.366  -1.928   1.674   0.858  N13  A7M  19  
A7M  C21  C17  C  0  1  N  N  N  -10.354   5.205  -18.524   4.707   0.826   0.976  C21  A7M  20  
A7M  H1   H1   H  0  1  N  N  N  -10.739   2.591  -18.050   2.517   1.492  -0.459  H1   A7M  21  
A7M  H2   H2   H  0  1  N  N  N  -10.430   5.461  -21.239   4.458  -1.833   1.378  H2   A7M  22  
A7M  H3   H3   H  0  1  N  N  N  -10.810   3.651  -22.891   2.644  -3.313   0.614  H3   A7M  23  
A7M  H4   H4   H  0  1  N  N  N  -11.654  -0.199  -20.366   0.714   1.059  -1.989  H4   A7M  24  
A7M  H5   H5   H  0  1  N  N  N  -10.279  -0.015  -19.226   0.033  -0.576  -2.166  H5   A7M  25  
A7M  H6   H6   H  0  1  N  N  N  -10.329   0.490  -22.629  -0.364  -2.627  -0.098  H6   A7M  26  
A7M  H7   H7   H  0  1  N  N  N  -11.942   0.219  -21.888   0.091  -2.306  -1.789  H7   A7M  27  
A7M  H8   H8   H  0  1  N  N  N  -11.766   1.359  -23.265   0.831  -3.666  -0.911  H8   A7M  28  
A7M  H9   H9   H  0  1  N  N  N  -15.709   0.426  -15.930  -4.377   0.538   1.848  H9   A7M  29  
A7M  H10  H10  H  0  1  N  N  N  -17.151   1.267  -17.734  -5.111  -1.679   1.135  H10  A7M  30  
A7M  H11  H11  H  0  1  N  N  N  -16.205   1.783  -19.946  -3.765  -2.991  -0.450  H11  A7M  31  
A7M  H12  H12  H  0  1  N  N  N  -13.825   1.306  -20.414  -1.662  -2.086  -1.343  H12  A7M  32  
A7M  H13  H13  H  0  1  N  N  N   -9.728  -1.436  -15.244   0.384   4.496  -1.010  H13  A7M  33  
A7M  H14  H14  H  0  1  N  N  N  -10.203  -1.445  -17.520   1.151   2.435  -0.076  H14  A7M  34  
A7M  H15  H15  H  0  1  N  N  N   -9.795   0.192  -16.903   0.142   3.349   1.072  H15  A7M  35  
A7M  H16  H16  H  0  1  N  N  N  -11.311   5.653  -18.219   4.459   1.225   1.960  H16  A7M  36  
A7M  H17  H17  H  0  1  N  N  N   -9.858   4.766  -17.646   5.637   0.261   1.038  H17  A7M  37  
A7M  H18  H18  H  0  1  N  N  N   -9.708   5.982  -18.959   4.828   1.649   0.271  H18  A7M  38  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A7M  C9   C6   SING  N  N   1  
A7M  C5   C6   DOUB  Y  N   2  
A7M  C5   C4   SING  Y  N   3  
A7M  C6   C1   SING  Y  N   4  
A7M  C4   C3   DOUB  Y  N   5  
A7M  C1   C7   SING  N  N   6  
A7M  C1   C2   DOUB  Y  N   7  
A7M  C3   C2   SING  Y  N   8  
A7M  C3   C21  SING  N  N   9  
A7M  C7   N10  SING  N  N  10  
A7M  C20  C19  DOUB  Y  N  11  
A7M  C20  C11  SING  Y  N  12  
A7M  C19  C18  SING  Y  N  13  
A7M  C11  N10  SING  Y  N  14  
A7M  C11  C12  DOUB  Y  N  15  
A7M  N10  C14  SING  Y  N  16  
A7M  C18  C17  DOUB  Y  N  17  
A7M  C14  C15  SING  N  N  18  
A7M  C14  N13  DOUB  Y  N  19  
A7M  C12  C17  SING  Y  N  20  
A7M  C12  N13  SING  Y  N  21  
A7M  C15  O16  SING  N  N  22  
A7M  C2   H1   SING  N  N  23  
A7M  C4   H2   SING  N  N  24  
A7M  C5   H3   SING  N  N  25  
A7M  C7   H4   SING  N  N  26  
A7M  C7   H5   SING  N  N  27  
A7M  C9   H6   SING  N  N  28  
A7M  C9   H7   SING  N  N  29  
A7M  C9   H8   SING  N  N  30  
A7M  C17  H9   SING  N  N  31  
A7M  C18  H10  SING  N  N  32  
A7M  C19  H11  SING  N  N  33  
A7M  C20  H12  SING  N  N  34  
A7M  O16  H13  SING  N  N  35  
A7M  C15  H14  SING  N  N  36  
A7M  C15  H15  SING  N  N  37  
A7M  C21  H16  SING  N  N  38  
A7M  C21  H17  SING  N  N  39  
A7M  C21  H18  SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A7M  SMILES            ACDLabs               12.01  "c3(Cn1c(CO)nc2ccccc12)cc(C)ccc3C"  
A7M  InChI             InChI                 1.03   "InChI=1S/C17H18N2O/c1-12-7-8-13(2)14(9-12)10-19-16-6-4-3-5-15(16)18-17(19)11-20/h3-9,20H,10-11H2,1-2H3"  
A7M  InChIKey          InChI                 1.03   RZRPPZWEPMDGEI-UHFFFAOYSA-N  
A7M  SMILES_CANONICAL  CACTVS                3.385  "Cc1ccc(C)c(Cn2c(CO)nc3ccccc23)c1"  
A7M  SMILES            CACTVS                3.385  "Cc1ccc(C)c(Cn2c(CO)nc3ccccc23)c1"  
A7M  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "Cc1ccc(c(c1)Cn2c3ccccc3nc2CO)C"  
A7M  SMILES            "OpenEye OEToolkits"  2.0.6  "Cc1ccc(c(c1)Cn2c3ccccc3nc2CO)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A7M  "SYSTEMATIC NAME"  ACDLabs               12.01  "{1-[(2,5-dimethylphenyl)methyl]-1H-benzimidazol-2-yl}methanol"  
A7M  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "[1-[(2,5-dimethylphenyl)methyl]benzimidazol-2-yl]methanol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A7M  "Create component"  2017-07-08  RCSB  
A7M  "Initial release"   2019-12-25  RCSB  
##
