data_76M
# 
_chem_comp.id                                    76M 
_chem_comp.name                                  "[(2~{S},5~{R})-1-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-azaniumyl-6-oxidanyl-6-oxidanylidene-hexan-2-yl]-(2-methylpropyl)azanium" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H33 N7 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    2 
_chem_comp.pdbx_initial_date                     2016-09-06 
_chem_comp.pdbx_modified_date                    2016-10-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        439.509 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     76M 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5LSY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
76M C1  C1  C 0 1 N N N 8.900  17.015 30.169 4.559  4.118  -2.896 C1  76M 1  
76M C2  C2  C 0 1 N N N 10.300 17.623 30.091 3.767  3.892  -1.607 C2  76M 2  
76M C3  C3  C 0 1 N N N 10.395 18.881 30.953 2.431  4.633  -1.692 C3  76M 3  
76M C6  C4  C 0 1 N N S 13.836 16.128 30.154 2.483  0.752  -0.007 C6  76M 4  
76M C7  C5  C 0 1 N N N 15.155 16.893 30.290 3.748  -0.106 0.038  C7  76M 5  
76M C8  C6  C 0 1 N N N 16.241 16.470 29.325 3.361  -1.586 0.029  C8  76M 6  
76M C11 C7  C 0 1 N N N 18.402 17.208 28.195 4.249  -3.897 -0.118 C11 76M 7  
76M C14 C8  C 0 1 N N N 13.733 14.942 31.111 1.678  0.542  1.276  C14 76M 8  
76M C15 C9  C 0 1 N N R 14.785 13.866 30.928 0.353  1.303  1.178  C15 76M 9  
76M C23 C10 C 0 1 Y N N 15.920 14.560 34.208 -2.283 -1.305 -0.654 C23 76M 10 
76M C25 C11 C 0 1 Y N N 16.740 13.402 35.812 -4.425 -1.195 -0.978 C25 76M 11 
76M C26 C12 C 0 1 Y N N 17.168 12.830 37.018 -5.780 -1.357 -1.312 C26 76M 12 
76M C31 C13 C 0 1 Y N N 17.090 12.743 34.661 -4.046 -0.032 -0.286 C31 76M 13 
76M C4  C14 C 0 1 N N N 11.343 16.585 30.491 3.510  2.396  -1.421 C4  76M 14 
76M N5  N1  N 1 1 N N N 12.728 17.125 30.390 2.855  2.168  -0.126 N5  76M 15 
76M C9  C15 C 0 1 N N R 17.516 17.301 29.447 4.628  -2.445 0.015  C9  76M 16 
76M N10 N2  N 1 1 N N N 18.284 16.896 30.663 5.369  -2.244 1.267  N10 76M 17 
76M O12 O1  O 0 1 N N N 17.844 17.382 27.078 4.229  -4.608 0.859  O12 76M 18 
76M O13 O2  O 0 1 N N N 19.627 16.966 28.371 3.934  -4.401 -1.322 O13 76M 19 
76M O16 O3  O 0 1 N N N 16.052 14.281 31.483 -0.470 0.720  0.154  O16 76M 20 
76M C17 C16 C 0 1 N N R 16.662 13.200 32.216 -1.840 0.844  0.593  C17 76M 21 
76M C18 C17 C 0 1 N N R 15.842 11.940 31.856 -1.763 0.532  2.109  C18 76M 22 
76M O19 O4  O 0 1 N N N 16.337 11.283 30.699 -2.852 1.138  2.809  O19 76M 23 
76M C20 C18 C 0 1 N N S 14.437 12.555 31.628 -0.418 1.186  2.507  C20 76M 24 
76M O21 O5  O 0 1 N N N 13.613 11.773 30.770 -0.638 2.480  3.073  O21 76M 25 
76M N22 N3  N 0 1 Y N N 16.565 13.486 33.635 -2.691 -0.132 -0.092 N22 76M 26 
76M N24 N4  N 0 1 Y N N 16.006 14.542 35.515 -3.301 -1.926 -1.176 N24 76M 27 
76M N27 N5  N 0 1 N N N 16.892 13.376 38.210 -6.212 -2.481 -1.993 N27 76M 28 
76M N28 N6  N 0 1 Y N N 17.891 11.677 36.980 -6.637 -0.405 -0.958 N28 76M 29 
76M C29 C19 C 0 1 Y N N 18.162 11.138 35.771 -6.234 0.672  -0.308 C29 76M 30 
76M N30 N7  N 0 1 Y N N 17.805 11.598 34.572 -4.975 0.865  0.026  N30 76M 31 
76M H44 H1  H 0 1 N N N 8.155  17.770 29.879 3.988  3.740  -3.744 H44 76M 32 
76M H43 H2  H 0 1 N N N 8.835  16.155 29.486 4.743  5.184  -3.028 H43 76M 33 
76M H45 H3  H 0 1 N N N 8.702  16.681 31.198 5.511  3.590  -2.835 H45 76M 34 
76M H46 H4  H 0 1 N N N 10.488 17.911 29.046 4.339  4.271  -0.759 H46 76M 35 
76M H49 H5  H 0 1 N N N 11.410 19.300 30.881 1.860  4.255  -2.540 H49 76M 36 
76M H48 H6  H 0 1 N N N 9.666  19.624 30.598 1.867  4.472  -0.774 H48 76M 37 
76M H47 H7  H 0 1 N N N 10.178 18.625 32.000 2.615  5.699  -1.824 H47 76M 38 
76M H34 H8  H 0 1 N N N 13.758 15.752 29.123 1.878  0.463  -0.867 H34 76M 39 
76M H52 H9  H 0 1 N N N 15.531 16.746 31.313 4.368  0.113  -0.832 H52 76M 40 
76M H53 H10 H 0 1 N N N 14.949 17.961 30.125 4.307  0.118  0.947  H53 76M 41 
76M H55 H11 H 0 1 N N N 15.855 16.571 28.300 2.778  -1.815 0.921  H55 76M 42 
76M H54 H12 H 0 1 N N N 16.491 15.417 29.521 2.767  -1.801 -0.859 H54 76M 43 
76M H56 H13 H 0 1 N N N 13.816 15.327 32.138 1.477  -0.521 1.410  H56 76M 44 
76M H57 H14 H 0 1 N N N 12.745 14.478 30.972 2.248  0.914  2.128  H57 76M 45 
76M H39 H15 H 0 1 N N N 14.901 13.667 29.852 0.544  2.351  0.948  H39 76M 46 
76M H60 H16 H 0 1 N N N 15.405 15.325 33.647 -1.265 -1.664 -0.667 H60 76M 47 
76M H51 H17 H 0 1 N N N 11.157 16.275 31.530 2.864  2.036  -2.223 H51 76M 48 
76M H50 H18 H 0 1 N N N 11.251 15.713 29.826 4.457  1.858  -1.449 H50 76M 49 
76M H32 H19 H 0 1 N N N 12.929 17.602 31.245 2.027  2.740  -0.062 H32 76M 50 
76M H33 H20 H 0 1 N N N 12.743 17.778 29.632 3.490  2.412  0.619  H33 76M 51 
76M H35 H21 H 0 1 N N N 17.219 18.353 29.566 5.254  -2.154 -0.829 H35 76M 52 
76M H36 H22 H 0 1 N N N 17.694 16.962 31.468 4.790  -2.514 2.048  H36 76M 53 
76M H38 H23 H 0 1 N N N 18.601 15.953 30.558 6.205  -2.810 1.257  H38 76M 54 
76M H37 H24 H 0 1 N N N 19.072 17.502 30.777 5.623  -1.272 1.356  H37 76M 55 
76M H1  H25 H 0 1 N N N 20.068 16.934 27.530 3.698  -5.338 -1.357 H1  76M 56 
76M H40 H26 H 0 1 N N N 17.710 13.058 31.914 -2.206 1.857  0.424  H40 76M 57 
76M H41 H27 H 0 1 N N N 15.810 11.261 32.721 -1.740 -0.543 2.284  H41 76M 58 
76M H58 H28 H 0 1 N N N 17.197 10.922 30.882 -2.848 0.971  3.762  H58 76M 59 
76M H42 H29 H 0 1 N N N 13.951 12.754 32.595 0.123  0.549  3.207  H42 76M 60 
76M H59 H30 H 0 1 N N N 13.393 10.955 31.200 -1.120 2.466  3.911  H59 76M 61 
76M H62 H31 H 0 1 N N N 17.288 12.812 38.935 -5.577 -3.169 -2.246 H62 76M 62 
76M H61 H32 H 0 1 N N N 17.281 14.296 38.253 -7.151 -2.581 -2.218 H61 76M 63 
76M H63 H33 H 0 1 N N N 18.737 10.224 35.777 -6.964 1.421  -0.039 H63 76M 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
76M O12 C11 DOUB N N 1  
76M C11 O13 SING N N 2  
76M C11 C9  SING N N 3  
76M C8  C9  SING N N 4  
76M C8  C7  SING N N 5  
76M C9  N10 SING N N 6  
76M C2  C1  SING N N 7  
76M C2  C4  SING N N 8  
76M C2  C3  SING N N 9  
76M C6  C7  SING N N 10 
76M C6  N5  SING N N 11 
76M C6  C14 SING N N 12 
76M N5  C4  SING N N 13 
76M O19 C18 SING N N 14 
76M O21 C20 SING N N 15 
76M C15 C14 SING N N 16 
76M C15 O16 SING N N 17 
76M C15 C20 SING N N 18 
76M O16 C17 SING N N 19 
76M C20 C18 SING N N 20 
76M C18 C17 SING N N 21 
76M C17 N22 SING N N 22 
76M N22 C23 SING Y N 23 
76M N22 C31 SING Y N 24 
76M C23 N24 DOUB Y N 25 
76M N30 C31 DOUB Y N 26 
76M N30 C29 SING Y N 27 
76M C31 C25 SING Y N 28 
76M N24 C25 SING Y N 29 
76M C29 N28 DOUB Y N 30 
76M C25 C26 DOUB Y N 31 
76M N28 C26 SING Y N 32 
76M C26 N27 SING N N 33 
76M C1  H44 SING N N 34 
76M C1  H43 SING N N 35 
76M C1  H45 SING N N 36 
76M C2  H46 SING N N 37 
76M C3  H49 SING N N 38 
76M C3  H48 SING N N 39 
76M C3  H47 SING N N 40 
76M C6  H34 SING N N 41 
76M C7  H52 SING N N 42 
76M C7  H53 SING N N 43 
76M C8  H55 SING N N 44 
76M C8  H54 SING N N 45 
76M C14 H56 SING N N 46 
76M C14 H57 SING N N 47 
76M C15 H39 SING N N 48 
76M C23 H60 SING N N 49 
76M C4  H51 SING N N 50 
76M C4  H50 SING N N 51 
76M N5  H32 SING N N 52 
76M N5  H33 SING N N 53 
76M C9  H35 SING N N 54 
76M N10 H36 SING N N 55 
76M N10 H38 SING N N 56 
76M N10 H37 SING N N 57 
76M O13 H1  SING N N 58 
76M C17 H40 SING N N 59 
76M C18 H41 SING N N 60 
76M O19 H58 SING N N 61 
76M C20 H42 SING N N 62 
76M O21 H59 SING N N 63 
76M N27 H62 SING N N 64 
76M N27 H61 SING N N 65 
76M C29 H63 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
76M InChI            InChI                1.03  
"InChI=1S/C19H31N7O5/c1-9(2)6-22-10(3-4-11(20)19(29)30)5-12-14(27)15(28)18(31-12)26-8-25-13-16(21)23-7-24-17(13)26/h7-12,14-15,18,22,27-28H,3-6,20H2,1-2H3,(H,29,30)(H2,21,23,24)/p+2/t10-,11+,12+,14+,15+,18+/m0/s1" 
76M InChIKey         InChI                1.03  JFKLCPCUECHESR-SNDYUSLUSA-P 
76M SMILES_CANONICAL CACTVS               3.385 "CC(C)C[NH2+][C@@H](CC[C@@H]([NH3+])C(O)=O)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23" 
76M SMILES           CACTVS               3.385 "CC(C)C[NH2+][CH](CC[CH]([NH3+])C(O)=O)C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23" 
76M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CC(C)C[NH2+][C@@H](CC[C@H](C(=O)O)[NH3+])C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O" 
76M SMILES           "OpenEye OEToolkits" 2.0.5 "CC(C)C[NH2+]C(CCC(C(=O)O)[NH3+])CC1C(C(C(O1)n2cnc3c2ncnc3N)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
76M "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "[(2~{S},5~{R})-1-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-azaniumyl-6-oxidanyl-6-oxidanylidene-hexan-2-yl]-(2-methylpropyl)azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
76M "Create component" 2016-09-06 EBI  
76M "Initial release"  2016-10-12 RCSB 
# 
