data_10M
#

_chem_comp.id                                   10M
_chem_comp.name                                 "decyl 4-O-alpha-D-glucopyranosyl-1-thio-beta-D-glucopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C22 H42 O10 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(2R,3R,4S,5S,6R)-2-((2R,3S,4R,5R,6S)-6-Decylsulfanyl-4,5-dihydroxy-2-hydroxymethyl-tetrahydro-pyran-3-yloxy)-6-hydroxymethyl-tetrahydro-pyran-3,4,5-triol, n-Decyl-beta-D-thiomaltoside"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-02-07
_chem_comp.pdbx_modified_date                   2021-03-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       498.628
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    10M
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3C5T
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
10M  O10   O10   O  0  1  N  N  N  -29.774  32.962  2.787  -0.732   3.924  -0.261  O10   10M   1  
10M  C22   C22   C  0  1  N  N  R  -30.883  32.087  2.672  -1.053   2.557  -0.530  C22   10M   2  
10M  C21   C21   C  0  1  N  N  R  -32.158  32.771  3.143  -2.388   2.205   0.134  C21   10M   3  
10M  O9    O9    O  0  1  N  N  N  -32.481  33.762  2.172  -3.431   2.993  -0.442  O9    10M   4  
10M  C14   C14   C  0  1  N  N  S  -33.318  31.791  3.265  -2.682   0.719  -0.095  C14   10M   5  
10M  O3    O3    O  0  1  N  N  N  -34.366  32.433  3.980  -3.889   0.362   0.582  O3    10M   6  
10M  C15   C15   C  0  1  N  N  R  -35.679  32.450  3.387  -5.076   0.619  -0.172  C15   10M   7  
10M  C20   C20   C  0  1  N  N  R  -36.520  33.589  3.967  -6.298   0.498   0.743  C20   10M   8  
10M  O8    O8    O  0  1  N  N  N  -35.987  34.865  3.587  -6.167   1.407   1.838  O8    10M   9  
10M  C19   C19   C  0  1  N  N  S  -36.584  33.473  5.497  -6.387  -0.936   1.275  C19   10M  10  
10M  O7    O7    O  0  1  N  N  N  -37.494  34.474  5.974  -7.565  -1.078   2.071  O7    10M  11  
10M  C18   C18   C  0  1  N  N  S  -36.980  32.069  6.016  -6.448  -1.905   0.091  C18   10M  12  
10M  O6    O6    O  0  1  N  N  N  -36.414  31.800  7.323  -6.458  -3.250   0.575  O6    10M  13  
10M  C16   C16   C  0  1  N  N  R  -36.581  30.902  5.087  -5.220  -1.691  -0.799  C16   10M  14  
10M  C17   C17   C  0  1  N  N  N  -37.638  29.793  5.155  -5.305  -2.614  -2.016  C17   10M  15  
10M  O5    O5    O  0  1  N  N  N  -37.429  29.013  6.349  -4.106  -2.499  -2.784  O5    10M  16  
10M  O4    O4    O  0  1  N  N  N  -36.413  31.258  3.695  -5.181  -0.330  -1.234  O4    10M  17  
10M  C12   C12   C  0  1  N  N  R  -32.881  30.544  4.044  -1.522  -0.114   0.455  C12   10M  18  
10M  C13   C13   C  0  1  N  N  N  -33.948  29.468  3.992  -1.781  -1.596   0.177  C13   10M  19  
10M  O2    O2    O  0  1  N  N  N  -33.594  28.420  4.880  -0.746  -2.381   0.774  O2    10M  20  
10M  O1    O1    O  0  1  N  N  N  -31.685  29.988  3.482  -0.306   0.285  -0.182  O1    10M  21  
10M  C11   C11   C  0  1  N  N  S  -30.568  30.874  3.518   0.045   1.653   0.037  C11   10M  22  
10M  S     S     S  0  1  N  N  N  -29.122  30.098  2.874   1.616   2.015  -0.794  S     10M  23  
10M  C10   C10   C  0  1  N  N  N  -28.446  29.015  4.110   2.801   0.975   0.102  C10   10M  24  
10M  C9    C9    C  0  1  N  N  N  -28.162  29.760  5.416   4.199   1.169  -0.489  C9    10M  25  
10M  C8    C8    C  0  1  N  N  N  -26.686  30.070  5.633   5.199   0.292   0.268  C8    10M  26  
10M  C7    C7    C  0  1  N  N  N  -26.081  29.339  6.836   6.596   0.485  -0.323  C7    10M  27  
10M  C6    C6    C  0  1  N  N  N  -25.177  30.222  7.705   7.596  -0.392   0.433  C6    10M  28  
10M  C5    C5    C  0  1  N  N  N  -23.809  29.593  8.043   8.994  -0.198  -0.158  C5    10M  29  
10M  C4    C4    C  0  1  N  N  N  -23.831  28.080  8.308   9.994  -1.075   0.599  C4    10M  30  
10M  C3    C3    C  0  1  N  N  N  -22.419  27.482  8.409  11.391  -0.882   0.008  C3    10M  31  
10M  C2    C2    C  0  1  N  N  N  -22.490  25.970  8.675  12.391  -1.759   0.764  C2    10M  32  
10M  C1    C1    C  0  1  N  N  N  -21.276  25.181  8.208  13.789  -1.565   0.173  C1    10M  33  
10M  HO10  HO10  H  0  0  N  N  N  -29.433  33.158  1.922   0.103   4.216  -0.652  HO10  10M  34  
10M  H22   H22   H  0  1  N  N  N  -31.051  31.795  1.625  -1.130   2.406  -1.607  H22   10M  35  
10M  H21   H21   H  0  1  N  N  N  -31.994  33.206  4.140  -2.327   2.405   1.204  H21   10M  36  
10M  HO9   HO9   H  0  1  N  N  N  -32.553  34.609  2.595  -3.305   3.947  -0.340  HO9   10M  37  
10M  H14   H14   H  0  1  N  N  N  -33.651  31.487  2.262  -2.794   0.530  -1.162  H14   10M  38  
10M  H15   H15   H  0  1  N  N  N  -35.517  32.557  2.304  -5.031   1.626  -0.587  H15   10M  39  
10M  H20   H20   H  0  1  N  N  N  -37.538  33.508  3.559  -7.200   0.735   0.179  H20   10M  40  
10M  HO8   HO8   H  0  1  N  N  N  -35.869  35.403  4.361  -6.100   2.334   1.573  HO8   10M  41  
10M  H19   H19   H  0  1  N  N  N  -35.569  33.633  5.890  -5.508  -1.155   1.882  H19   10M  42  
10M  HO7   HO7   H  0  1  N  N  N  -37.695  34.310  6.888  -7.596  -0.488   2.836  HO7   10M  43  
10M  H18   H18   H  0  1  N  N  N  -38.078  32.111  6.059  -7.354  -1.719  -0.486  H18   10M  44  
10M  HO6   HO6   H  0  1  N  N  N  -35.468  31.741  7.253  -7.208  -3.455   1.150  HO6   10M  45  
10M  H16   H16   H  0  1  N  N  N  -35.600  30.573  5.460  -4.317  -1.918  -0.232  H16   10M  46  
10M  H17   H17   H  0  1  N  N  N  -38.642  30.242  5.179  -5.425  -3.645  -1.682  H17   10M  47  
10M  H17A  H17A  H  0  0  N  N  N  -37.552  29.145  4.270  -6.159  -2.329  -2.630  H17A  10M  48  
10M  HO5   HO5   H  0  1  N  N  N  -37.383  28.092  6.122  -4.089  -3.058  -3.573  HO5   10M  49  
10M  H12   H12   H  0  1  N  N  N  -32.709  30.861  5.083  -1.438   0.045   1.531  H12   10M  50  
10M  H13   H13   H  0  1  N  N  N  -34.917  29.894  4.292  -2.744  -1.882   0.600  H13   10M  51  
10M  H13A  H13A  H  0  0  N  N  N  -34.028  29.075  2.968  -1.791  -1.767  -0.900  H13A  10M  52  
10M  HO2   HO2   H  0  1  N  N  N  -33.515  27.607  4.395  -0.846  -3.333   0.637  HO2   10M  53  
10M  H11   H11   H  0  1  N  N  N  -30.379  31.159  4.564   0.149   1.835   1.107  H11   10M  54  
10M  H10   H10   H  0  1  N  N  N  -29.170  28.211  4.311   2.809   1.258   1.155  H10   10M  55  
10M  H10A  H10A  H  0  0  N  N  N  -27.497  28.608  3.731   2.509  -0.071   0.010  H10A  10M  56  
10M  H9    H9    H  0  1  N  N  N  -28.712  30.712  5.393   4.191   0.885  -1.541  H9    10M  57  
10M  H9A   H9A   H  0  1  N  N  N  -28.481  29.105  6.240   4.491   2.215  -0.396  H9A   10M  58  
10M  H8    H8    H  0  1  N  N  N  -26.135  29.763  4.732   5.207   0.575   1.321  H8    10M  59  
10M  H8A   H8A   H  0  1  N  N  N  -26.604  31.149  5.831   4.907  -0.754   0.176  H8A   10M  60  
10M  H7    H7    H  0  1  N  N  N  -26.907  28.974  7.464   6.588   0.202  -1.376  H7    10M  61  
10M  H7A   H7A   H  0  1  N  N  N  -25.454  28.527  6.439   6.888   1.531  -0.231  H7A   10M  62  
10M  H6    H6    H  0  1  N  N  N  -24.992  31.158  7.158   7.604  -0.108   1.486  H6    10M  63  
10M  H6A   H6A   H  0  1  N  N  N  -25.702  30.371  8.660   7.304  -1.438   0.341  H6A   10M  64  
10M  H5    H5    H  0  1  N  N  N  -23.141  29.771  7.187   8.986  -0.482  -1.210  H5    10M  65  
10M  H5A   H5A   H  0  1  N  N  N  -23.476  30.065  8.979   9.286   0.848  -0.065  H5A   10M  66  
10M  H4    H4    H  0  1  N  N  N  -24.355  27.900  9.258  10.002  -0.792   1.651  H4    10M  67  
10M  H4A   H4A   H  0  1  N  N  N  -24.342  27.597  7.462   9.702  -2.121   0.507  H4A   10M  68  
10M  H3    H3    H  0  1  N  N  N  -21.886  27.656  7.463  11.383  -1.165  -1.045  H3    10M  69  
10M  H3A   H3A   H  0  1  N  N  N  -21.887  27.965  9.242  11.683   0.165   0.100  H3A   10M  70  
10M  H2    H2    H  0  1  N  N  N  -22.586  25.825  9.761  12.399  -1.475   1.817  H2    10M  71  
10M  H2A   H2A   H  0  1  N  N  N  -23.348  25.592  8.100  12.099  -2.805   0.672  H2A   10M  72  
10M  H1    H1    H  0  1  N  N  N  -21.355  24.991  7.128  13.781  -1.848  -0.879  H1    10M  73  
10M  H1A   H1A   H  0  1  N  N  N  -20.363  25.759  8.412  14.081  -0.519   0.265  H1A   10M  74  
10M  H1B   H1B   H  0  1  N  N  N  -21.232  24.223  8.747  14.501  -2.190   0.712  H1B   10M  75  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
10M  O10  C22   SING  N  N   1  
10M  C22  C21   SING  N  N   2  
10M  C22  C11   SING  N  N   3  
10M  C21  O9    SING  N  N   4  
10M  C21  C14   SING  N  N   5  
10M  C14  O3    SING  N  N   6  
10M  C14  C12   SING  N  N   7  
10M  O3   C15   SING  N  N   8  
10M  C15  C20   SING  N  N   9  
10M  C15  O4    SING  N  N  10  
10M  C20  O8    SING  N  N  11  
10M  C20  C19   SING  N  N  12  
10M  C19  O7    SING  N  N  13  
10M  C19  C18   SING  N  N  14  
10M  C18  O6    SING  N  N  15  
10M  C18  C16   SING  N  N  16  
10M  C16  C17   SING  N  N  17  
10M  C16  O4    SING  N  N  18  
10M  C17  O5    SING  N  N  19  
10M  C12  C13   SING  N  N  20  
10M  C12  O1    SING  N  N  21  
10M  C13  O2    SING  N  N  22  
10M  O1   C11   SING  N  N  23  
10M  C11  S     SING  N  N  24  
10M  S    C10   SING  N  N  25  
10M  C10  C9    SING  N  N  26  
10M  C9   C8    SING  N  N  27  
10M  C8   C7    SING  N  N  28  
10M  C7   C6    SING  N  N  29  
10M  C6   C5    SING  N  N  30  
10M  C5   C4    SING  N  N  31  
10M  C4   C3    SING  N  N  32  
10M  C3   C2    SING  N  N  33  
10M  C2   C1    SING  N  N  34  
10M  O10  HO10  SING  N  N  35  
10M  C22  H22   SING  N  N  36  
10M  C21  H21   SING  N  N  37  
10M  O9   HO9   SING  N  N  38  
10M  C14  H14   SING  N  N  39  
10M  C15  H15   SING  N  N  40  
10M  C20  H20   SING  N  N  41  
10M  O8   HO8   SING  N  N  42  
10M  C19  H19   SING  N  N  43  
10M  O7   HO7   SING  N  N  44  
10M  C18  H18   SING  N  N  45  
10M  O6   HO6   SING  N  N  46  
10M  C16  H16   SING  N  N  47  
10M  C17  H17   SING  N  N  48  
10M  C17  H17A  SING  N  N  49  
10M  O5   HO5   SING  N  N  50  
10M  C12  H12   SING  N  N  51  
10M  C13  H13   SING  N  N  52  
10M  C13  H13A  SING  N  N  53  
10M  O2   HO2   SING  N  N  54  
10M  C11  H11   SING  N  N  55  
10M  C10  H10   SING  N  N  56  
10M  C10  H10A  SING  N  N  57  
10M  C9   H9    SING  N  N  58  
10M  C9   H9A   SING  N  N  59  
10M  C8   H8    SING  N  N  60  
10M  C8   H8A   SING  N  N  61  
10M  C7   H7    SING  N  N  62  
10M  C7   H7A   SING  N  N  63  
10M  C6   H6    SING  N  N  64  
10M  C6   H6A   SING  N  N  65  
10M  C5   H5    SING  N  N  66  
10M  C5   H5A   SING  N  N  67  
10M  C4   H4    SING  N  N  68  
10M  C4   H4A   SING  N  N  69  
10M  C3   H3    SING  N  N  70  
10M  C3   H3A   SING  N  N  71  
10M  C2   H2    SING  N  N  72  
10M  C2   H2A   SING  N  N  73  
10M  C1   H1    SING  N  N  74  
10M  C1   H1A   SING  N  N  75  
10M  C1   H1B   SING  N  N  76  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
10M  SMILES            ACDLabs               10.04  "S(CCCCCCCCCC)C2OC(C(OC1OC(CO)C(O)C(O)C1O)C(O)C2O)CO"  
10M  SMILES_CANONICAL  CACTVS                3.341  "CCCCCCCCCCS[C@@H]1O[C@H](CO)[C@@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O"  
10M  SMILES            CACTVS                3.341  "CCCCCCCCCCS[CH]1O[CH](CO)[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O"  
10M  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCCCCCCCCS[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O"  
10M  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCCCCCCCCSC1C(C(C(C(O1)CO)OC2C(C(C(C(O2)CO)O)O)O)O)O"  
10M  InChI             InChI                 1.03   "InChI=1S/C22H42O10S/c1-2-3-4-5-6-7-8-9-10-33-22-19(29)17(27)20(14(12-24)31-22)32-21-18(28)16(26)15(25)13(11-23)30-21/h13-29H,2-12H2,1H3/t13-,14-,15-,16+,17-,18-,19-,20-,21-,22+/m1/s1"  
10M  InChIKey          InChI                 1.03   YZNNXXWNKQOETJ-HYLFJBCQSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
10M  "SYSTEMATIC NAME"  ACDLabs               10.04  "decyl 4-O-alpha-D-glucopyranosyl-1-thio-beta-D-glucopyranoside"  
10M  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3R,4S,5S,6R)-2-[(2R,3S,4R,5R,6S)-6-decylsulfanyl-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
10M  "Create component"   2008-02-07  PDBJ  
10M  "Modify descriptor"  2011-06-04  RCSB  
10M  "Modify synonyms"    2021-03-03  RCSB  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  10M  "(2R,3R,4S,5S,6R)-2-((2R,3S,4R,5R,6S)-6-Decylsulfanyl-4,5-dihydroxy-2-hydroxymethyl-tetrahydro-pyran-3-yloxy)-6-hydroxymethyl-tetrahydro-pyran-3,4,5-triol"  PDB  ?  
2  10M  n-Decyl-beta-D-thiomaltoside                                                                                                                                 PDB  ?  
##
