data_V2L
# 
_chem_comp.id                                    V2L 
_chem_comp.name                                  "1-(1-benzyl-1H-imidazol-2-yl)methanamine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H13 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-29 
_chem_comp.pdbx_modified_date                    2022-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        187.241 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V2L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FPJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V2L N1  N1  N 0 1 Y N N 30.397 16.082 42.784 -2.897 0.009  0.754  N1  V2L 1  
V2L C7  C1  C 0 1 Y N N 29.139 17.548 41.803 -1.825 -1.762 0.089  C7  V2L 2  
V2L C8  C2  C 0 1 Y N N 30.280 17.346 42.456 -2.837 -1.326 0.863  C8  V2L 3  
V2L N2  N2  N 0 1 N N N 27.593 13.917 42.760 -0.737 2.441  0.501  N2  V2L 4  
V2L C9  C3  C 0 1 Y N N 29.323 15.506 42.351 -1.960 0.417  -0.058 C9  V2L 5  
V2L C1  C4  C 0 1 Y N N 28.883 15.586 37.891 2.749  1.148  0.235  C1  V2L 6  
V2L C5  C5  C 0 1 Y N N 26.685 15.246 37.549 3.031  -1.208 0.558  C5  V2L 7  
V2L C6  C6  C 0 1 N N N 27.304 16.231 41.059 -0.134 -0.641 -1.421 C6  V2L 8  
V2L C4  C7  C 0 1 Y N N 26.436 15.678 38.843 1.865  -1.444 -0.146 C4  V2L 9  
V2L C3  C8  C 0 1 Y N N 27.466 16.020 39.593 1.138  -0.384 -0.654 C3  V2L 10 
V2L C2  C9  C 0 1 Y N N 28.643 16.003 39.126 1.583  0.911  -0.469 C2  V2L 11 
V2L C10 C10 C 0 1 N N N 29.098 14.115 42.617 -1.694 1.850  -0.443 C10 V2L 12 
V2L N   N3  N 0 1 Y N N 28.533 16.403 41.723 -1.268 -0.657 -0.495 N   V2L 13 
V2L C   C11 C 0 1 Y N N 27.909 15.193 37.103 3.473  0.088  0.749  C   V2L 14 
V2L H1  H1  H 0 1 N N N 28.783 18.490 41.412 -1.512 -2.787 -0.045 H1  V2L 15 
V2L H2  H2  H 0 1 N N N 31.006 18.113 42.683 -3.487 -1.944 1.466  H2  V2L 16 
V2L H3  H3  H 0 1 N N N 27.399 12.954 42.947 0.113  1.899  0.541  H3  V2L 17 
V2L H4  H4  H 0 1 N N N 27.253 14.478 43.515 -0.542 3.402  0.264  H4  V2L 18 
V2L H6  H6  H 0 1 N N N 29.899 15.569 37.526 3.097  2.160  0.380  H6  V2L 19 
V2L H7  H7  H 0 1 N N N 25.865 14.953 36.910 3.599  -2.036 0.955  H7  V2L 20 
V2L H8  H8  H 0 1 N N N 26.689 17.129 41.219 -0.278 0.147  -2.160 H8  V2L 21 
V2L H9  H9  H 0 1 N N N 26.793 15.355 41.486 -0.064 -1.604 -1.927 H9  V2L 22 
V2L H10 H10 H 0 1 N N N 25.428 15.733 39.226 1.522  -2.457 -0.299 H10 V2L 23 
V2L H11 H11 H 0 1 N N N 29.465 16.334 39.744 1.020  1.739  -0.874 H11 V2L 24 
V2L H12 H12 H 0 1 N N N 29.480 13.506 41.784 -2.628 2.413  -0.414 H12 V2L 25 
V2L H13 H13 H 0 1 N N N 29.606 13.823 43.548 -1.280 1.884  -1.450 H13 V2L 26 
V2L H14 H14 H 0 1 N N N 28.117 14.833 36.106 4.384  0.272  1.298  H14 V2L 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V2L C   C5  DOUB Y N 1  
V2L C   C1  SING Y N 2  
V2L C5  C4  SING Y N 3  
V2L C1  C2  DOUB Y N 4  
V2L C4  C3  DOUB Y N 5  
V2L C2  C3  SING Y N 6  
V2L C3  C6  SING N N 7  
V2L C6  N   SING N N 8  
V2L N   C7  SING Y N 9  
V2L N   C9  SING Y N 10 
V2L C7  C8  DOUB Y N 11 
V2L C9  C10 SING N N 12 
V2L C9  N1  DOUB Y N 13 
V2L C8  N1  SING Y N 14 
V2L C10 N2  SING N N 15 
V2L C7  H1  SING N N 16 
V2L C8  H2  SING N N 17 
V2L N2  H3  SING N N 18 
V2L N2  H4  SING N N 19 
V2L C1  H6  SING N N 20 
V2L C5  H7  SING N N 21 
V2L C6  H8  SING N N 22 
V2L C6  H9  SING N N 23 
V2L C4  H10 SING N N 24 
V2L C2  H11 SING N N 25 
V2L C10 H12 SING N N 26 
V2L C10 H13 SING N N 27 
V2L C   H14 SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V2L SMILES           ACDLabs              12.01 NCc1nccn1Cc1ccccc1                                                         
V2L InChI            InChI                1.06  "InChI=1S/C11H13N3/c12-8-11-13-6-7-14(11)9-10-4-2-1-3-5-10/h1-7H,8-9,12H2" 
V2L InChIKey         InChI                1.06  WAKASDKZDPCQPA-UHFFFAOYSA-N                                                
V2L SMILES_CANONICAL CACTVS               3.385 NCc1nccn1Cc2ccccc2                                                         
V2L SMILES           CACTVS               3.385 NCc1nccn1Cc2ccccc2                                                         
V2L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Cn2ccnc2CN"                                                     
V2L SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Cn2ccnc2CN"                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
V2L "SYSTEMATIC NAME" ACDLabs              12.01 "1-(1-benzyl-1H-imidazol-2-yl)methanamine"   
V2L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[1-(phenylmethyl)imidazol-2-yl]methanamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V2L "Create component" 2022-08-29 RCSB 
V2L "Initial release"  2022-11-02 RCSB 
# 
