data_M5L
# 
_chem_comp.id                                    M5L 
_chem_comp.name                                  "6-[3-(4,4-difluoropiperidin-1-yl)propyl]-4-methylpyridin-2-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H21 F2 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-03-14 
_chem_comp.pdbx_modified_date                    2022-07-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        269.333 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M5L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UAM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M5L C02 C1  C 0 1 Y N N -14.487 0.321  -39.436 -4.191 -1.380 -0.012 C02 M5L 1  
M5L C03 C2  C 0 1 Y N N -14.710 -0.512 -40.537 -5.110 -0.540 0.611  C03 M5L 2  
M5L C04 C3  C 0 1 Y N N -13.691 -1.352 -40.968 -4.866 0.821  0.639  C04 M5L 3  
M5L C05 C4  C 0 1 Y N N -12.467 -1.343 -40.308 -3.707 1.299  0.041  C05 M5L 4  
M5L C06 C5  C 0 1 Y N N -12.281 -0.495 -39.210 -2.839 0.410  -0.559 C06 M5L 5  
M5L C07 C6  C 0 1 N N N -13.910 -2.264 -42.157 -5.837 1.763  1.303  C07 M5L 6  
M5L C08 C7  C 0 1 N N N -10.975 -0.406 -38.440 -1.580 0.923  -1.209 C08 M5L 7  
M5L C09 C8  C 0 1 N N N -10.117 -1.670 -38.417 -0.369 0.199  -0.618 C09 M5L 8  
M5L C10 C9  C 0 1 N N N -8.774  -1.355 -37.754 0.909  0.720  -1.278 C10 M5L 9  
M5L C12 C10 C 0 1 N N N -6.717  -2.126 -36.825 2.244  0.360  0.710  C12 M5L 10 
M5L C13 C11 C 0 1 N N N -5.740  -3.286 -36.673 3.370  -0.490 1.303  C13 M5L 11 
M5L C14 C12 C 0 1 N N N -5.232  -3.715 -38.044 4.666  -0.219 0.534  C14 M5L 12 
M5L C15 C13 C 0 1 N N N -6.432  -4.124 -38.897 4.446  -0.529 -0.949 C15 M5L 13 
M5L C16 C14 C 0 1 N N N -7.461  -2.991 -38.940 3.288  0.321  -1.477 C16 M5L 14 
M5L F17 F1  F 0 1 N N N -4.598  -2.696 -38.621 5.025  1.125  0.683  F17 M5L 15 
M5L F18 F2  F 0 1 N N N -4.409  -4.743 -37.891 5.687  -1.033 1.036  F18 M5L 16 
M5L N01 N1  N 0 1 Y N N -13.290 0.315  -38.820 -3.095 -0.885 -0.566 N01 M5L 17 
M5L N02 N2  N 0 1 N N N -15.454 1.160  -38.993 -4.423 -2.750 -0.047 N02 M5L 18 
M5L N11 N3  N 0 1 N N N -7.893  -2.532 -37.609 2.072  0.024  -0.710 N11 M5L 19 
M5L H1  H1  H 0 1 N N N -15.663 -0.502 -41.046 -6.001 -0.946 1.066  H1  M5L 20 
M5L H2  H2  H 0 1 N N N -11.665 -1.986 -40.640 -3.488 2.356  0.045  H2  M5L 21 
M5L H3  H3  H 0 1 N N N -13.622 -1.739 -43.080 -5.567 1.882  2.352  H3  M5L 22 
M5L H4  H4  H 0 1 N N N -13.295 -3.169 -42.043 -5.799 2.733  0.806  H4  M5L 23 
M5L H5  H5  H 0 1 N N N -14.972 -2.546 -42.212 -6.845 1.357  1.230  H5  M5L 24 
M5L H6  H6  H 0 1 N N N -10.375 0.399  -38.890 -1.625 0.739  -2.283 H6  M5L 25 
M5L H7  H7  H 0 1 N N N -11.216 -0.146 -37.399 -1.488 1.993  -1.027 H7  M5L 26 
M5L H8  H8  H 0 1 N N N -10.634 -2.455 -37.846 -0.325 0.382  0.456  H8  M5L 27 
M5L H9  H9  H 0 1 N N N -9.946  -2.018 -39.447 -0.462 -0.872 -0.799 H9  M5L 28 
M5L H10 H10 H 0 1 N N N -8.252  -0.604 -38.366 0.864  0.536  -2.351 H10 M5L 29 
M5L H11 H11 H 0 1 N N N -8.969  -0.942 -36.753 1.001  1.790  -1.096 H11 M5L 30 
M5L H12 H12 H 0 1 N N N -6.212  -1.294 -37.337 1.316  0.158  1.245  H12 M5L 31 
M5L H13 H13 H 0 1 N N N -7.045  -1.798 -35.828 2.496  1.416  0.805  H13 M5L 32 
M5L H14 H14 H 0 1 N N N -6.251  -4.133 -36.191 3.508  -0.230 2.352  H14 M5L 33 
M5L H15 H15 H 0 1 N N N -4.890  -2.969 -36.051 3.112  -1.546 1.220  H15 M5L 34 
M5L H16 H16 H 0 1 N N N -6.897  -5.021 -38.463 5.352  -0.298 -1.508 H16 M5L 35 
M5L H17 H17 H 0 1 N N N -6.092  -4.345 -39.920 4.205  -1.586 -1.067 H17 M5L 36 
M5L H18 H18 H 0 1 N N N -7.016  -2.138 -39.474 3.536  1.377  -1.370 H18 M5L 37 
M5L H19 H19 H 0 1 N N N -8.346  -3.346 -39.489 3.120  0.092  -2.529 H19 M5L 38 
M5L H20 H20 H 0 1 N N N -15.108 1.688  -38.217 -3.783 -3.339 -0.477 H20 M5L 39 
M5L H21 H21 H 0 1 N N N -15.718 1.783  -39.729 -5.225 -3.116 0.357  H21 M5L 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M5L C07 C04 SING N N 1  
M5L C04 C03 DOUB Y N 2  
M5L C04 C05 SING Y N 3  
M5L C03 C02 SING Y N 4  
M5L C05 C06 DOUB Y N 5  
M5L C02 N02 SING N N 6  
M5L C02 N01 DOUB Y N 7  
M5L C06 N01 SING Y N 8  
M5L C06 C08 SING N N 9  
M5L C16 C15 SING N N 10 
M5L C16 N11 SING N N 11 
M5L C15 C14 SING N N 12 
M5L F17 C14 SING N N 13 
M5L C08 C09 SING N N 14 
M5L C09 C10 SING N N 15 
M5L C14 F18 SING N N 16 
M5L C14 C13 SING N N 17 
M5L C10 N11 SING N N 18 
M5L N11 C12 SING N N 19 
M5L C12 C13 SING N N 20 
M5L C03 H1  SING N N 21 
M5L C05 H2  SING N N 22 
M5L C07 H3  SING N N 23 
M5L C07 H4  SING N N 24 
M5L C07 H5  SING N N 25 
M5L C08 H6  SING N N 26 
M5L C08 H7  SING N N 27 
M5L C09 H8  SING N N 28 
M5L C09 H9  SING N N 29 
M5L C10 H10 SING N N 30 
M5L C10 H11 SING N N 31 
M5L C12 H12 SING N N 32 
M5L C12 H13 SING N N 33 
M5L C13 H14 SING N N 34 
M5L C13 H15 SING N N 35 
M5L C15 H16 SING N N 36 
M5L C15 H17 SING N N 37 
M5L C16 H18 SING N N 38 
M5L C16 H19 SING N N 39 
M5L N02 H20 SING N N 40 
M5L N02 H21 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M5L SMILES           ACDLabs              12.01 "Cc1cc(CCCN2CCC(F)(F)CC2)nc(N)c1"                                                                        
M5L InChI            InChI                1.03  "InChI=1S/C14H21F2N3/c1-11-9-12(18-13(17)10-11)3-2-6-19-7-4-14(15,16)5-8-19/h9-10H,2-8H2,1H3,(H2,17,18)" 
M5L InChIKey         InChI                1.03  QUDAAAGCJFIIKZ-UHFFFAOYSA-N                                                                              
M5L SMILES_CANONICAL CACTVS               3.385 "Cc1cc(N)nc(CCCN2CCC(F)(F)CC2)c1"                                                                        
M5L SMILES           CACTVS               3.385 "Cc1cc(N)nc(CCCN2CCC(F)(F)CC2)c1"                                                                        
M5L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(c1)N)CCCN2CCC(CC2)(F)F"                                                                        
M5L SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(c1)N)CCCN2CCC(CC2)(F)F"                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
M5L "SYSTEMATIC NAME" ACDLabs              12.01 "6-[3-(4,4-difluoropiperidin-1-yl)propyl]-4-methylpyridin-2-amine"        
M5L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[3-[4,4-bis(fluoranyl)piperidin-1-yl]propyl]-4-methyl-pyridin-2-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M5L "Create component" 2022-03-14 RCSB 
M5L "Initial release"  2022-07-13 RCSB 
# 
