data_M0L
# 
_chem_comp.id                                    M0L 
_chem_comp.name                                  "4-[[(4~{S},5~{R})-4,5-bis(4-chlorophenyl)-2-(4-methoxy-2-propan-2-yloxy-phenyl)-4,5-dihydroimidazol-1-yl]carbonyl]-3-methylidene-piperazin-2-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H30 Cl2 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Nutlin-3a analogue; 4-[[(4S,5R)-4,5-bis(4-chlorophenyl)-2-(4-methoxy-2-propan-2-yloxy-phenyl)-4,5-dihydroimidazol-1-yl]carbonyl]-3-methylidene-piperazin-2-one" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-07-20 
_chem_comp.pdbx_modified_date                    2023-01-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        593.500 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M0L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AEU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M0L O3  O1  O  0 1 N N N 26.891 4.623 15.113 -1.959 -0.861 1.202  O3  M0L 1  
M0L N2  N1  N  0 1 N N N 27.895 3.484 13.487 -1.431 -2.700 0.075  N2  M0L 2  
M0L O2  O2  O  0 1 N N N 32.134 5.851 9.589  -6.292 2.718  0.333  O2  M0L 3  
M0L N3  N2  N  0 1 N N N 31.320 4.203 15.588 -0.566 1.164  -2.073 N3  M0L 4  
M0L N1  N3  N  0 1 N N N 29.122 4.472 15.206 -0.826 -0.578 -0.687 N1  M0L 5  
M0L C10 C1  C  0 1 Y N N 31.951 4.248 20.402 2.937  2.762  -0.432 C10 M0L 6  
M0L C9  C2  C  0 1 Y N N 32.706 5.387 20.297 4.099  2.659  -1.175 C9  M0L 7  
M0L C3  C3  C  0 1 Y N N 28.630 6.068 18.556 1.248  -0.870 1.072  C3  M0L 8  
M0L C2  C4  C  0 1 Y N N 28.514 7.322 19.119 2.248  -0.885 2.026  C2  M0L 9  
M0L C5  C5  C  0 1 Y N N 29.331 7.040 16.507 2.901  -0.830 -0.661 C5  M0L 10 
M0L O1  O3  O  0 1 N N N 28.932 6.223 13.125 -1.963 1.144  1.496  O1  M0L 11 
M0L C6  C6  C  0 1 Y N N 29.212 8.302 17.059 3.901  -0.833 0.293  C6  M0L 12 
M0L C8  C7  C  0 1 Y N N 32.846 6.039 19.099 4.147  1.815  -2.271 C8  M0L 13 
M0L C7  C8  C  0 1 Y N N 32.184 5.552 17.988 3.033  1.076  -2.622 C7  M0L 14 
M0L C4  C9  C  0 1 Y N N 29.049 5.905 17.248 1.574  -0.842 -0.271 C4  M0L 15 
M0L C1  C10 C  0 1 Y N N 28.811 8.423 18.363 3.575  -0.866 1.637  C1  M0L 16 
M0L C23 C11 C  0 1 N N N 27.128 7.650 13.257 -2.949 0.492  3.604  C23 M0L 17 
M0L C22 C12 C  0 1 Y N N 32.287 4.498 11.500 -4.827 1.953  -1.378 C22 M0L 18 
M0L C21 C13 C  0 1 N N R 29.210 4.516 16.671 0.484  -0.827 -1.311 C21 M0L 19 
M0L C11 C14 C  0 1 Y N N 31.293 3.772 19.286 1.826  2.018  -0.781 C11 M0L 20 
M0L C12 C15 C  0 1 Y N N 31.841 4.141 12.754 -3.611 1.434  -1.759 C12 M0L 21 
M0L C16 C16 C  0 1 N N N 29.431 1.875 14.165 0.853  -3.139 0.691  C16 M0L 22 
M0L C15 C17 C  0 1 N N N 28.793 2.523 13.213 -0.235 -3.454 -0.015 C15 M0L 23 
M0L CL  CL1 CL 0 0 N N N 33.423 6.067 21.721 5.498  3.588  -0.733 CL  M0L 24 
M0L C14 C18 C  0 1 N N N 27.911 4.218 14.624 -1.424 -1.361 0.232  C14 M0L 25 
M0L C13 C19 C  0 1 N N N 29.141 8.498 12.129 -0.911 1.934  3.523  C13 M0L 26 
M0L CL6 CL2 CL 0 0 N N N 28.703 9.996 19.078 4.831  -0.870 2.836  CL6 M0L 27 
M0L C61 C20 C  0 1 Y N N 31.390 4.421 18.066 1.872  1.179  -1.879 C61 M0L 28 
M0L C41 C21 C  0 1 N N S 30.633 3.916 16.859 0.658  0.373  -2.263 C41 M0L 29 
M0L C51 C22 C  0 1 N N N 30.415 4.486 14.732 -1.334 0.594  -1.202 C51 M0L 30 
M0L C31 C23 C  0 1 Y N N 31.650 5.506 10.811 -5.091 2.205  -0.035 C31 M0L 31 
M0L C42 C24 C  0 1 Y N N 30.552 6.147 11.352 -4.131 1.933  0.928  C42 M0L 32 
M0L C52 C25 C  0 1 Y N N 30.104 5.772 12.597 -2.904 1.411  0.555  C52 M0L 33 
M0L C62 C26 C  0 1 Y N N 30.759 4.787 13.334 -2.639 1.152  -0.796 C62 M0L 34 
M0L C32 C27 C  0 1 N N N 28.604 7.623 13.185 -2.230 1.595  2.826  C32 M0L 35 
M0L C33 C28 C  0 1 N N N 31.186 6.238 8.614  -7.236 2.974  -0.709 C33 M0L 36 
M0L C34 C29 C  0 1 N N N 26.801 3.673 12.528 -2.682 -3.474 -0.020 C34 M0L 37 
M0L C43 C30 C  0 1 N N N 27.386 3.781 11.160 -2.669 -4.266 -1.327 C43 M0L 38 
M0L N5  N4  N  0 1 N N N 28.278 2.687 10.945 -1.417 -4.990 -1.501 N5  M0L 39 
M0L C63 C31 C  0 1 N N N 29.061 2.156 11.870 -0.264 -4.613 -0.939 C63 M0L 40 
M0L O11 O4  O  0 1 N N N 29.947 1.387 11.554 0.760  -5.221 -1.183 O11 M0L 41 
M0L H3  H3  H  0 1 N N N 31.872 3.729 21.346 2.899  3.420  0.424  H3  M0L 42 
M0L H4  H4  H  0 1 N N N 28.389 5.197 19.148 0.212  -0.885 1.375  H4  M0L 43 
M0L H5  H5  H  0 1 N N N 28.193 7.433 20.144 1.993  -0.911 3.075  H5  M0L 44 
M0L H6  H6  H  0 1 N N N 29.649 6.938 15.480 3.155  -0.803 -1.710 H6  M0L 45 
M0L H7  H7  H  0 1 N N N 29.432 9.180 16.470 4.938  -0.823 -0.011 H7  M0L 46 
M0L H8  H8  H  0 1 N N N 33.465 6.921 19.025 5.054  1.735  -2.851 H8  M0L 47 
M0L H9  H9  H  0 1 N N N 32.288 6.063 17.042 3.069  0.421  -3.480 H9  M0L 48 
M0L H10 H10 H  0 1 N N N 26.787 6.980 14.060 -3.889 0.250  3.107  H10 M0L 49 
M0L H11 H11 H  0 1 N N N 26.790 8.676 13.467 -2.319 -0.397 3.641  H11 M0L 50 
M0L H12 H12 H  0 1 N N N 26.708 7.315 12.297 -3.152 0.836  4.618  H12 M0L 51 
M0L H13 H13 H  0 1 N N N 33.132 3.990 11.060 -5.577 2.171  -2.123 H13 M0L 52 
M0L H14 H14 H  0 1 N N N 28.469 3.838 17.120 0.472  -1.762 -1.871 H14 M0L 53 
M0L H15 H15 H  0 1 N N N 30.692 2.878 19.365 0.919  2.095  -0.199 H15 M0L 54 
M0L H16 H16 H  0 1 N N N 32.340 3.348 13.292 -3.408 1.243  -2.803 H16 M0L 55 
M0L H17 H17 H  0 1 N N N 29.238 2.111 15.201 0.817  -2.334 1.410  H17 M0L 56 
M0L H18 H18 H  0 1 N N N 30.147 1.108 13.910 1.770  -3.690 0.543  H18 M0L 57 
M0L H19 H19 H  0 1 N N N 28.809 9.532 12.305 -0.398 2.721  2.969  H19 M0L 58 
M0L H20 H20 H  0 1 N N N 30.240 8.458 12.144 -1.114 2.279  4.537  H20 M0L 59 
M0L H21 H21 H  0 1 N N N 28.775 8.157 11.149 -0.280 1.046  3.560  H21 M0L 60 
M0L H22 H22 H  0 1 N N N 30.522 2.826 16.958 0.735  0.033  -3.296 H22 M0L 61 
M0L H24 H24 H  0 1 N N N 30.052 6.932 10.804 -4.340 2.131  1.969  H24 M0L 62 
M0L H25 H25 H  0 1 N N N 28.979 8.009 14.144 -2.860 2.484  2.789  H25 M0L 63 
M0L H26 H26 H  0 1 N N N 31.705 6.490 7.677  -7.463 2.044  -1.230 H26 M0L 64 
M0L H27 H27 H  0 1 N N N 30.486 5.409 8.434  -8.151 3.382  -0.279 H27 M0L 65 
M0L H28 H28 H  0 1 N N N 30.629 7.116 8.972  -6.814 3.692  -1.413 H28 M0L 66 
M0L H29 H29 H  0 1 N N N 26.250 4.594 12.770 -2.753 -4.160 0.824  H29 M0L 67 
M0L H30 H30 H  0 1 N N N 26.116 2.813 12.572 -3.534 -2.794 -0.010 H30 M0L 68 
M0L H31 H31 H  0 1 N N N 27.937 4.729 11.069 -3.494 -4.978 -1.319 H31 M0L 69 
M0L H32 H32 H  0 1 N N N 26.580 3.752 10.412 -2.801 -3.578 -2.162 H32 M0L 70 
M0L H33 H33 H  0 1 N N N 28.314 2.293 10.027 -1.420 -5.786 -2.056 H33 M0L 71 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M0L C33 O2  SING N N 1  
M0L O2  C31 SING N N 2  
M0L C31 C42 DOUB Y N 3  
M0L C31 C22 SING Y N 4  
M0L N5  C43 SING N N 5  
M0L N5  C63 SING N N 6  
M0L C43 C34 SING N N 7  
M0L C42 C52 SING Y N 8  
M0L C22 C12 DOUB Y N 9  
M0L O11 C63 DOUB N N 10 
M0L C63 C15 SING N N 11 
M0L C13 C32 SING N N 12 
M0L C34 N2  SING N N 13 
M0L C52 O1  SING N N 14 
M0L C52 C62 DOUB Y N 15 
M0L C12 C62 SING Y N 16 
M0L O1  C32 SING N N 17 
M0L C32 C23 SING N N 18 
M0L C15 N2  SING N N 19 
M0L C15 C16 DOUB N N 20 
M0L C62 C51 SING N N 21 
M0L N2  C14 SING N N 22 
M0L C14 O3  DOUB N N 23 
M0L C14 N1  SING N N 24 
M0L C51 N1  SING N N 25 
M0L C51 N3  DOUB N N 26 
M0L N1  C21 SING N N 27 
M0L N3  C41 SING N N 28 
M0L C5  C6  DOUB Y N 29 
M0L C5  C4  SING Y N 30 
M0L C21 C41 SING N N 31 
M0L C21 C4  SING N N 32 
M0L C41 C61 SING N N 33 
M0L C6  C1  SING Y N 34 
M0L C4  C3  DOUB Y N 35 
M0L C7  C61 DOUB Y N 36 
M0L C7  C8  SING Y N 37 
M0L C61 C11 SING Y N 38 
M0L C1  CL6 SING N N 39 
M0L C1  C2  DOUB Y N 40 
M0L C3  C2  SING Y N 41 
M0L C8  C9  DOUB Y N 42 
M0L C11 C10 DOUB Y N 43 
M0L C9  C10 SING Y N 44 
M0L C9  CL  SING N N 45 
M0L C10 H3  SING N N 46 
M0L C3  H4  SING N N 47 
M0L C2  H5  SING N N 48 
M0L C5  H6  SING N N 49 
M0L C6  H7  SING N N 50 
M0L C8  H8  SING N N 51 
M0L C7  H9  SING N N 52 
M0L C23 H10 SING N N 53 
M0L C23 H11 SING N N 54 
M0L C23 H12 SING N N 55 
M0L C22 H13 SING N N 56 
M0L C21 H14 SING N N 57 
M0L C11 H15 SING N N 58 
M0L C12 H16 SING N N 59 
M0L C16 H17 SING N N 60 
M0L C16 H18 SING N N 61 
M0L C13 H19 SING N N 62 
M0L C13 H20 SING N N 63 
M0L C13 H21 SING N N 64 
M0L C41 H22 SING N N 65 
M0L C42 H24 SING N N 66 
M0L C32 H25 SING N N 67 
M0L C33 H26 SING N N 68 
M0L C33 H27 SING N N 69 
M0L C33 H28 SING N N 70 
M0L C34 H29 SING N N 71 
M0L C34 H30 SING N N 72 
M0L C43 H31 SING N N 73 
M0L C43 H32 SING N N 74 
M0L N5  H33 SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M0L InChI            InChI                1.06    "InChI=1S/C31H30Cl2N4O4/c1-18(2)41-26-17-24(40-4)13-14-25(26)29-35-27(20-5-9-22(32)10-6-20)28(21-7-11-23(33)12-8-21)37(29)31(39)36-16-15-34-30(38)19(36)3/h5-14,17-18,27-28H,3,15-16H2,1-2,4H3,(H,34,38)/t27-,28+/m0/s1" 
M0L InChIKey         InChI                1.06    JLTUTZCZAIJXTD-WUFINQPMSA-N                                                                                                                                                                                              
M0L SMILES_CANONICAL CACTVS               3.385   "COc1ccc(c(OC(C)C)c1)C2=N[C@H]([C@H](N2C(=O)N3CCNC(=O)C3=C)c4ccc(Cl)cc4)c5ccc(Cl)cc5"                                                                                                                                    
M0L SMILES           CACTVS               3.385   "COc1ccc(c(OC(C)C)c1)C2=N[CH]([CH](N2C(=O)N3CCNC(=O)C3=C)c4ccc(Cl)cc4)c5ccc(Cl)cc5"                                                                                                                                      
M0L SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)Oc1cc(ccc1C2=N[C@H]([C@H](N2C(=O)N3CCNC(=O)C3=C)c4ccc(cc4)Cl)c5ccc(cc5)Cl)OC"                                                                                                                                      
M0L SMILES           "OpenEye OEToolkits" 3.1.0.0 "CC(C)Oc1cc(ccc1C2=NC(C(N2C(=O)N3CCNC(=O)C3=C)c4ccc(cc4)Cl)c5ccc(cc5)Cl)OC"                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           M0L 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "4-[[(4~{S},5~{R})-4,5-bis(4-chlorophenyl)-2-(4-methoxy-2-propan-2-yloxy-phenyl)-4,5-dihydroimidazol-1-yl]carbonyl]-3-methylidene-piperazin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M0L "Create component" 2022-09-19 PDBE 
M0L "Initial release"  2023-01-18 RCSB 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 M0L "Nutlin-3a analogue"                                                                                                                         AUTHOR ? 
2 M0L "4-[[(4S,5R)-4,5-bis(4-chlorophenyl)-2-(4-methoxy-2-propan-2-yloxy-phenyl)-4,5-dihydroimidazol-1-yl]carbonyl]-3-methylidene-piperazin-2-one" PDB    ? 
# 
