data_L4L
# 
_chem_comp.id                                    L4L 
_chem_comp.name                                  "[(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{S})-2-acetamido-3-oxidanylidene-pent-4-enoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H21 N O11 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-15 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        399.371 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     L4L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6Z6Y 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
L4L C01  C1  C 0 1 N N N 8.041  -5.856 18.037 4.163  -2.130 -2.574 C01  L4L 1  
L4L C02  C2  C 0 1 N N N 7.321  -5.130 17.182 4.033  -1.795 -1.289 C02  L4L 2  
L4L C03  C3  C 0 1 N N N 6.128  -5.243 16.294 3.746  -0.409 -0.920 C03  L4L 3  
L4L C04  C4  C 0 1 N N S 5.861  -3.964 15.486 3.599  -0.030 0.531  C04  L4L 4  
L4L C06  C5  C 0 1 N N N 6.157  -1.616 16.377 4.874  2.033  0.762  C06  L4L 5  
L4L C07  C6  C 0 1 N N N 4.666  -1.538 16.773 4.951  3.532  0.901  C07  L4L 6  
L4L C09  C7  C 0 1 N N N 6.216  -4.495 14.075 2.247  -0.521 1.052  C09  L4L 7  
L4L C11  C8  C 0 1 N N R 8.070  -4.476 12.787 -0.109 -0.412 0.623  C11  L4L 8  
L4L C12  C9  C 0 1 N N R 9.542  -4.087 12.732 -1.149 0.288  -0.255 C12  L4L 9  
L4L C14  C10 C 0 1 N N S 9.949  -4.039 11.301 -2.548 -0.193 0.142  C14  L4L 10 
L4L C20  C11 C 0 1 N N S 9.614  -5.258 10.526 -2.608 -1.718 0.010  C20  L4L 11 
L4L C22  C12 C 0 1 N N R 8.121  -5.599 10.664 -1.512 -2.341 0.878  C22  L4L 12 
L4L C23  C13 C 0 1 N N N 7.752  -6.862 9.977  -1.526 -3.861 0.705  C23  L4L 13 
L4L N05  N1  N 0 1 N N N 6.713  -2.821 15.745 3.674  1.427  0.666  N05  L4L 14 
L4L O08  O1  O 0 1 N N N 6.861  -0.685 16.595 5.891  1.373  0.738  O08  L4L 15 
L4L O10  O2  O 0 1 N N N 7.659  -4.622 14.067 1.202  -0.010 0.221  O10  L4L 16 
L4L O13  O3  O 0 1 N N N 9.654  -2.826 13.375 -1.059 1.702  -0.067 O13  L4L 17 
L4L O15  O4  O 0 1 N N N 11.392 -3.811 11.342 -3.520 0.400  -0.722 O15  L4L 18 
L4L O17  O5  O 0 1 N N N 11.028 -1.641 10.032 -5.218 2.005  -1.042 O17  L4L 19 
L4L O18  O6  O 0 1 N N N 12.247 -3.430 8.933  -4.329 1.451  1.228  O18  L4L 20 
L4L O19  O7  O 0 1 N N N 13.243 -2.253 10.893 -3.119 2.780  -0.298 O19  L4L 21 
L4L O21  O8  O 0 1 N N N 10.487 -6.357 10.944 -2.404 -2.087 -1.355 O21  L4L 22 
L4L O24  O9  O 0 1 N N N 6.346  -7.105 10.063 -0.583 -4.451 1.601  O24  L4L 23 
L4L O25  O10 O 0 1 N N N 7.880  -5.746 12.114 -0.240 -1.828 0.477  O25  L4L 24 
L4L O26  O11 O 0 1 N N N 5.620  -6.255 16.024 3.625  0.436  -1.783 O26  L4L 25 
L4L S16  S1  S 0 1 N N N 12.010 -2.754 10.238 -4.151 1.669  -0.165 S16  L4L 26 
L4L H1   H1  H 0 1 N N N 7.769  -6.882 18.237 4.375  -3.154 -2.846 H1   L4L 27 
L4L H011 H2  H 0 0 N N N 8.896  -5.418 18.530 4.052  -1.379 -3.342 H011 L4L 28 
L4L H2   H4  H 0 1 N N N 7.737  -4.136 17.108 4.140  -2.547 -0.521 H2   L4L 29 
L4L H041 H6  H 0 0 N N N 4.795  -3.696 15.534 4.400  -0.491 1.109  H041 L4L 30 
L4L H071 H7  H 0 0 N N N 4.459  -0.560 17.233 5.995  3.837  0.965  H071 L4L 31 
L4L H073 H8  H 0 0 N N N 4.042  -1.661 15.876 4.488  4.001  0.033  H073 L4L 32 
L4L H072 H9  H 0 0 N N N 4.436  -2.337 17.493 4.426  3.841  1.805  H072 L4L 33 
L4L H092 H10 H 0 0 N N N 5.887  -3.785 13.302 2.224  -1.611 1.035  H092 L4L 34 
L4L H091 H11 H 0 0 N N N 5.742  -5.472 13.900 2.102  -0.171 2.074  H091 L4L 35 
L4L H111 H12 H 0 0 N N N 7.485  -3.699 12.273 -0.270 -0.138 1.666  H111 L4L 36 
L4L H121 H13 H 0 0 N N N 10.137 -4.846 13.261 -0.964 0.048  -1.302 H121 L4L 37 
L4L H141 H14 H 0 0 N N N 9.463  -3.174 10.826 -2.754 0.094  1.173  H141 L4L 38 
L4L H201 H15 H 0 0 N N N 9.807  -5.050 9.463  -3.583 -2.075 0.342  H201 L4L 39 
L4L H221 H16 H 0 0 N N N 7.522  -4.767 10.265 -1.691 -2.092 1.924  H221 L4L 40 
L4L H231 H17 H 0 0 N N N 8.290  -7.698 10.449 -2.523 -4.242 0.925  H231 L4L 41 
L4L H232 H18 H 0 0 N N N 8.040  -6.792 8.918  -1.259 -4.112 -0.322 H232 L4L 42 
L4L H051 H19 H 0 0 N N N 7.680  -2.852 15.494 2.861  1.954  0.685  H051 L4L 43 
L4L H131 H20 H 0 0 N N N 9.384  -2.908 14.282 -0.197 2.075  -0.294 H131 L4L 44 
L4L H211 H21 H 0 0 N N N 11.395 -6.098 10.840 -2.425 -3.041 -1.512 H211 L4L 45 
L4L H241 H22 H 0 0 N N N 6.137  -7.917 9.617  -0.538 -5.416 1.546  H241 L4L 46 
L4L H3   H3  H 0 1 N N N 13.161 -1.320 11.051 -3.421 3.638  0.030  H3   L4L 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
L4L O18 S16  DOUB N N 1  
L4L C23 O24  SING N N 2  
L4L C23 C22  SING N N 3  
L4L O17 S16  DOUB N N 4  
L4L S16 O19  SING N N 5  
L4L S16 O15  SING N N 6  
L4L C20 C22  SING N N 7  
L4L C20 O21  SING N N 8  
L4L C20 C14  SING N N 9  
L4L C22 O25  SING N N 10 
L4L C14 O15  SING N N 11 
L4L C14 C12  SING N N 12 
L4L O25 C11  SING N N 13 
L4L C12 C11  SING N N 14 
L4L C12 O13  SING N N 15 
L4L C11 O10  SING N N 16 
L4L O10 C09  SING N N 17 
L4L C09 C04  SING N N 18 
L4L C04 N05  SING N N 19 
L4L C04 C03  SING N N 20 
L4L N05 C06  SING N N 21 
L4L O26 C03  DOUB N N 22 
L4L C03 C02  SING N N 23 
L4L C06 O08  DOUB N N 24 
L4L C06 C07  SING N N 25 
L4L C02 C01  DOUB N N 26 
L4L C01 H1   SING N N 27 
L4L C01 H011 SING N N 28 
L4L C02 H2   SING N N 29 
L4L C04 H041 SING N N 30 
L4L C07 H071 SING N N 31 
L4L C07 H073 SING N N 32 
L4L C07 H072 SING N N 33 
L4L C09 H092 SING N N 34 
L4L C09 H091 SING N N 35 
L4L C11 H111 SING N N 36 
L4L C12 H121 SING N N 37 
L4L C14 H141 SING N N 38 
L4L C20 H201 SING N N 39 
L4L C22 H221 SING N N 40 
L4L C23 H231 SING N N 41 
L4L C23 H232 SING N N 42 
L4L N05 H051 SING N N 43 
L4L O13 H131 SING N N 44 
L4L O21 H211 SING N N 45 
L4L O24 H241 SING N N 46 
L4L O19 H3   SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
L4L InChI            InChI                1.06  "InChI=1S/C13H21NO11S/c1-3-8(17)7(14-6(2)16)5-23-13-11(19)12(25-26(20,21)22)10(18)9(4-15)24-13/h3,7,9-13,15,18-19H,1,4-5H2,2H3,(H,14,16)(H,20,21,22)/t7-,9+,10-,11+,12-,13+/m0/s1" 
L4L InChIKey         InChI                1.06  XMURRHZYXOXPBZ-FJUAUIJYSA-N                                                                                                                                                        
L4L SMILES_CANONICAL CACTVS               3.385 "CC(=O)N[C@@H](CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O[S](O)(=O)=O)[C@H]1O)C(=O)C=C"                                                                                                    
L4L SMILES           CACTVS               3.385 "CC(=O)N[CH](CO[CH]1O[CH](CO)[CH](O)[CH](O[S](O)(=O)=O)[CH]1O)C(=O)C=C"                                                                                                            
L4L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H](CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)OS(=O)(=O)O)O)C(=O)C=C"                                                                                                    
L4L SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)NC(COC1C(C(C(C(O1)CO)O)OS(=O)(=O)O)O)C(=O)C=C"                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           L4L 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{S})-2-acetamido-3-oxidanylidene-pent-4-enoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
L4L "Create component"  2022-06-15 PDBE 
L4L "Initial release"   2022-07-20 RCSB 
L4L "Modify descriptor" 2022-08-22 RCSB 
# 
