data_MYK
# 
_chem_comp.id                                    MYK 
_chem_comp.name                                  N~6~-tetradecanoyl-L-lysine 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C20 H40 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               LYS 
_chem_comp.pdbx_synonyms                         "N6-myristoyl lysine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-10-17 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        356.543 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     MYK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3U31 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
MYK OXT OXT O 0 1 N Y N N N N -11.215 32.744 -39.821 11.045  1.345  -0.962 OXT MYK 1  
MYK C   C   C 0 1 N N N N N N -11.947 32.127 -40.737 10.683  0.461  -0.020 C   MYK 2  
MYK N   N   N 0 1 N N N N N N -14.357 32.491 -41.184 9.541   -1.575 0.658  N   MYK 3  
MYK O   O   O 0 1 N N N N N N -11.488 31.860 -41.850 11.332  0.358  0.994  O   MYK 4  
MYK CA  CA  C 0 1 N N S N N N -13.372 31.764 -40.352 9.466   -0.404 -0.226 CA  MYK 5  
MYK CB  CB  C 0 1 N N N N N N -13.644 30.249 -40.469 8.207   0.401  0.099  CB  MYK 6  
MYK CD  CD  C 0 1 N N N N N N -13.070 27.971 -39.810 5.708   0.370  0.097  CD  MYK 7  
MYK CE  CE  C 0 1 N N N N N N -12.197 27.124 -38.923 4.470   -0.465 -0.232 CE  MYK 8  
MYK CG  CG  C 0 1 N N N N N N -12.960 29.423 -39.379 6.968   -0.435 -0.229 CG  MYK 9  
MYK CI  CI  C 0 1 N N N N N N -10.582 21.651 -38.927 -1.693  0.530  0.188  CI  MYK 10 
MYK CK  CK  C 0 1 N N N N N N -9.927  20.596 -39.852 -2.931  -0.306 -0.141 CK  MYK 11 
MYK CL  CL  C 0 1 N N N N N N -10.385 19.107 -39.753 -4.191  0.499  0.185  CL  MYK 12 
MYK CM  CM  C 0 1 N N N N N N -9.966  18.162 -38.595 -5.430  -0.337 -0.144 CM  MYK 13 
MYK CP  CP  C 0 1 N N N N N N -10.645 16.772 -38.609 -6.689  0.468  0.182  CP  MYK 14 
MYK CQ  CQ  C 0 1 N N N N N N -12.184 14.134 -36.126 -10.426 -0.398 -0.149 CQ  MYK 15 
MYK CR  CR  C 0 1 N N N N N N -11.005 16.144 -37.248 -7.928  -0.367 -0.146 CR  MYK 16 
MYK CS  CS  C 0 1 N N N N N N -12.780 12.716 -36.312 -11.686 0.407  0.177  CS  MYK 17 
MYK CT  CT  C 0 1 N N N N N N -11.345 22.818 -39.551 -0.433  -0.276 -0.138 CT  MYK 18 
MYK CU  CU  C 0 1 N N N N N N -11.520 14.702 -37.392 -9.188  0.438  0.179  CU  MYK 19 
MYK CV  CV  C 0 1 N N N N N N -14.168 10.889 -35.171 -14.184 0.377  0.174  CV  MYK 20 
MYK CW  CW  C 0 1 N N N N N N -13.351 12.175 -34.985 -12.925 -0.428 -0.152 CW  MYK 21 
MYK CX  CX  C 0 1 N N N N N N -12.204 24.779 -38.125 2.046   -0.233 -0.130 CX  MYK 22 
MYK OX  OX  O 0 1 N N N N N N -11.890 25.080 -36.969 1.949   -1.356 -0.578 OX  MYK 23 
MYK CY  CY  C 0 1 N N N N N N -12.409 23.302 -38.540 0.805   0.560  0.191  CY  MYK 24 
MYK NZ  NZ  N 0 1 N N N N N N -12.395 25.696 -39.096 3.263   0.306  0.080  NZ  MYK 25 
MYK H   H   H 0 1 N N N N N N -15.283 32.232 -40.908 9.578   -1.294 1.627  HN  MYK 26 
MYK H2  H2  H 0 1 N Y N N N N -14.235 33.476 -41.060 8.769   -2.203 0.492  HNA MYK 27 
MYK HA  HA  H 0 1 N N N N N N -13.485 32.061 -39.299 9.428   -0.735 -1.264 HA  MYK 28 
MYK HB  HB  H 0 1 N N N N N N -14.729 30.088 -40.391 8.202   0.656  1.159  HB  MYK 29 
MYK HBA HBA H 0 1 N N N N N N -13.269 29.907 -41.445 8.196   1.315  -0.494 HBA MYK 30 
MYK HD  HD  H 0 1 N N N N N N -12.741 27.871 -40.855 5.698   1.285  -0.497 HD  MYK 31 
MYK HDA HDA H 0 1 N N N N N N -14.115 27.639 -39.723 5.704   0.625  1.156  HDA MYK 32 
MYK HE  HE  H 0 1 N N N N N N -11.147 27.353 -39.159 4.474   -0.720 -1.292 HE  MYK 33 
MYK HEA HEA H 0 1 N N N N N N -12.428 27.376 -37.877 4.480   -1.379 0.362  HEA MYK 34 
MYK HG  HG  H 0 1 N N N N N N -11.905 29.716 -39.278 6.972   -0.690 -1.289 HG  MYK 35 
MYK HGA HGA H 0 1 N N N N N N -13.457 29.576 -38.410 6.978   -1.349 0.364  HGA MYK 36 
MYK HI  HI  H 0 1 N N N N N N -11.305 21.108 -38.301 -1.703  1.444  -0.406 HI  MYK 37 
MYK HIA HIA H 0 1 N N N N N N -9.766  22.094 -38.337 -1.697  0.784  1.247  HIA MYK 38 
MYK HK  HK  H 0 1 N N N N N N -10.136 20.916 -40.883 -2.927  -0.561 -1.201 HK  MYK 39 
MYK HKA HKA H 0 1 N N N N N N -8.852  20.605 -39.620 -2.921  -1.220 0.453  HKA MYK 40 
MYK HL  HL  H 0 1 N N N N N N -11.483 19.147 -39.707 -4.195  0.754  1.245  HL  MYK 41 
MYK HLA HLA H 0 1 N N N N N N -10.002 18.628 -40.666 -4.202  1.413  -0.409 HLA MYK 42 
MYK HM  HM  H 0 1 N N N N N N -8.880  18.004 -38.669 -5.425  -0.592 -1.203 HM  MYK 43 
MYK HMA HMA H 0 1 N N N N N N -10.233 18.655 -37.648 -5.419  -1.251 0.450  HMA MYK 44 
MYK HP  HP  H 0 1 N N N N N N -11.585 16.881 -39.170 -6.694  0.723  1.242  HP  MYK 45 
MYK HPA HPA H 0 1 N N N N N N -9.948  16.081 -39.106 -6.700  1.382  -0.411 HPA MYK 46 
MYK HQ  HQ  H 0 1 N N N N N N -13.001 14.811 -35.837 -10.416 -1.312 0.445  HQ  MYK 47 
MYK HQA HQA H 0 1 N N N N N N -11.421 14.081 -35.336 -10.422 -0.653 -1.209 HQA MYK 48 
MYK HR  HR  H 0 1 N N N N N N -10.104 16.133 -36.618 -7.924  -0.622 -1.206 HR  MYK 49 
MYK HRA HRA H 0 1 N N N N N N -11.792 16.752 -36.779 -7.918  -1.281 0.447  HRA MYK 50 
MYK HS  HS  H 0 1 N N N N N N -13.589 12.764 -37.056 -11.690 0.662  1.236  HS  MYK 51 
MYK HSA HSA H 0 1 N N N N N N -11.987 12.039 -36.662 -11.696 1.321  -0.417 HSA MYK 52 
MYK HT  HT  H 0 1 N N N N N N -10.649 23.638 -39.781 -0.423  -1.190 0.456  HT  MYK 53 
MYK HTA HTA H 0 1 N N N N N N -11.835 22.490 -40.480 -0.429  -0.531 -1.198 HTA MYK 54 
MYK HU  HU  H 0 1 N N N N N N -10.661 14.060 -37.639 -9.198  1.352  -0.414 HU  MYK 55 
MYK HUA HUA H 0 1 N N N N N N -12.267 14.690 -38.199 -9.192  0.693  1.239  HUA MYK 56 
MYK HV  HV  H 0 1 N N N N N N -14.548 10.551 -34.196 -15.067 -0.219 -0.060 HV  MYK 57 
MYK HVA HVA H 0 1 N N N N N N -15.014 11.087 -35.846 -14.189 0.632  1.234  HVA MYK 58 
MYK HVB HVB H 0 1 N N N N N N -13.527 10.107 -35.605 -14.195 1.291  -0.420 HVB MYK 59 
MYK HW  HW  H 0 1 N N N N N N -12.511 11.958 -34.309 -12.920 -0.683 -1.212 HW  MYK 60 
MYK HWA HWA H 0 1 N N N N N N -14.007 12.943 -34.551 -12.914 -1.343 0.442  HWA MYK 61 
MYK HY  HY  H 0 1 N N N N N N -13.401 23.205 -39.005 0.795   1.474  -0.403 HY  MYK 62 
MYK HYA HYA H 0 1 N N N N N N -12.344 22.675 -37.639 0.801   0.815  1.250  HYA MYK 63 
MYK HNZ HNZ H 0 1 N N N N N N -12.692 25.371 -39.994 3.341   1.204  0.438  HNZ MYK 64 
MYK HXT HXT H 0 1 N Y N N N N -10.349 32.918 -40.171 11.833  1.878  -0.784 HXT MYK 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
MYK OXT C   SING N N 1  
MYK C   O   DOUB N N 2  
MYK C   CA  SING N N 3  
MYK N   CA  SING N N 4  
MYK CA  CB  SING N N 5  
MYK CB  CG  SING N N 6  
MYK CD  CE  SING N N 7  
MYK CD  CG  SING N N 8  
MYK CE  NZ  SING N N 9  
MYK CI  CK  SING N N 10 
MYK CI  CT  SING N N 11 
MYK CK  CL  SING N N 12 
MYK CL  CM  SING N N 13 
MYK CM  CP  SING N N 14 
MYK CP  CR  SING N N 15 
MYK CQ  CS  SING N N 16 
MYK CQ  CU  SING N N 17 
MYK CR  CU  SING N N 18 
MYK CS  CW  SING N N 19 
MYK CT  CY  SING N N 20 
MYK CV  CW  SING N N 21 
MYK CX  OX  DOUB N N 22 
MYK CX  CY  SING N N 23 
MYK CX  NZ  SING N N 24 
MYK N   H   SING N N 25 
MYK N   H2  SING N N 26 
MYK CA  HA  SING N N 27 
MYK CB  HB  SING N N 28 
MYK CB  HBA SING N N 29 
MYK CD  HD  SING N N 30 
MYK CD  HDA SING N N 31 
MYK CE  HE  SING N N 32 
MYK CE  HEA SING N N 33 
MYK CG  HG  SING N N 34 
MYK CG  HGA SING N N 35 
MYK CI  HI  SING N N 36 
MYK CI  HIA SING N N 37 
MYK CK  HK  SING N N 38 
MYK CK  HKA SING N N 39 
MYK CL  HL  SING N N 40 
MYK CL  HLA SING N N 41 
MYK CM  HM  SING N N 42 
MYK CM  HMA SING N N 43 
MYK CP  HP  SING N N 44 
MYK CP  HPA SING N N 45 
MYK CQ  HQ  SING N N 46 
MYK CQ  HQA SING N N 47 
MYK CR  HR  SING N N 48 
MYK CR  HRA SING N N 49 
MYK CS  HS  SING N N 50 
MYK CS  HSA SING N N 51 
MYK CT  HT  SING N N 52 
MYK CT  HTA SING N N 53 
MYK CU  HU  SING N N 54 
MYK CU  HUA SING N N 55 
MYK CV  HV  SING N N 56 
MYK CV  HVA SING N N 57 
MYK CV  HVB SING N N 58 
MYK CW  HW  SING N N 59 
MYK CW  HWA SING N N 60 
MYK CY  HY  SING N N 61 
MYK CY  HYA SING N N 62 
MYK NZ  HNZ SING N N 63 
MYK OXT HXT SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
MYK SMILES           ACDLabs              12.01 "O=C(O)C(N)CCCCNC(=O)CCCCCCCCCCCCC"                                                                                                       
MYK InChI            InChI                1.03  "InChI=1S/C20H40N2O3/c1-2-3-4-5-6-7-8-9-10-11-12-16-19(23)22-17-14-13-15-18(21)20(24)25/h18H,2-17,21H2,1H3,(H,22,23)(H,24,25)/t18-/m0/s1" 
MYK InChIKey         InChI                1.03  XTLFOGNEQSPWGW-SFHVURJKSA-N                                                                                                               
MYK SMILES_CANONICAL CACTVS               3.370 "CCCCCCCCCCCCCC(=O)NCCCC[C@H](N)C(O)=O"                                                                                                   
MYK SMILES           CACTVS               3.370 "CCCCCCCCCCCCCC(=O)NCCCC[CH](N)C(O)=O"                                                                                                    
MYK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCCCCCCCCCCCCC(=O)NCCCC[C@@H](C(=O)O)N"                                                                                                  
MYK SMILES           "OpenEye OEToolkits" 1.7.2 "CCCCCCCCCCCCCC(=O)NCCCCC(C(=O)O)N"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
MYK "SYSTEMATIC NAME" ACDLabs              12.01 N~6~-tetradecanoyl-L-lysine                         
MYK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-2-azanyl-6-(tetradecanoylamino)hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
MYK "Create component" 2011-10-17 PDBJ 
MYK "Modify synonyms"  2021-03-01 PDBE 
MYK "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      MYK 
_pdbx_chem_comp_synonyms.name         "N6-myristoyl lysine" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
