data_JRK
#

_chem_comp.id                                   JRK
_chem_comp.name                                 "prFMN cofactor and butynoic acid adduct"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H33 N4 O11 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-21
_chem_comp.pdbx_modified_date                   2019-08-23
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       608.534
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JRK
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6R3N
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JRK  C1   C1   C  0  1  N  N  N  21.479  11.230  27.083   0.882  -3.767  -0.836  C1   JRK   1  
JRK  C3   C2   C  0  1  N  N  S  20.448  11.951  24.534   2.537  -1.551  -0.424  C3   JRK   2  
JRK  C5   C3   C  0  1  Y  N  N  20.597  11.249  22.137   2.722   0.792  -0.783  C5   JRK   3  
JRK  C8   C4   C  0  1  Y  N  N  20.426  10.526  19.793   2.791   3.153  -0.370  C8   JRK   4  
JRK  N2   N1   N  0  1  N  N  N  21.562  10.295  26.201   0.355  -2.540  -0.938  N2   JRK   5  
JRK  N4   N2   N  0  1  N  N  N  21.128   9.598  23.829   0.545  -0.261  -1.064  N4   JRK   6  
JRK  C9   C5   C  0  1  Y  N  N  20.749   9.215  20.175   1.405   3.214  -0.383  C9   JRK   7  
JRK  C10  C6   C  0  1  Y  N  N  20.998   8.930  21.507   0.668   2.073  -0.595  C10  JRK   8  
JRK  N1   N3   N  0  1  N  N  N  21.494  12.537  26.698   2.209  -3.950  -0.922  N1   JRK   9  
JRK  C2   C7   C  0  1  N  N  N  21.193  12.926  25.409   3.064  -2.913  -0.785  C2   JRK  10  
JRK  C4   C8   C  0  1  N  N  N  21.000  10.572  24.884   1.099  -1.470  -0.808  C4   JRK  11  
JRK  N3   N4   N  0  1  N  N  R  20.491  12.282  23.116   3.325  -0.455  -1.042  N3   JRK  12  
JRK  C6   C9   C  0  1  Y  N  N  20.926   9.914  22.498   1.325   0.876  -0.813  C6   JRK  13  
JRK  C7   C10  C  0  1  Y  N  N  20.342  11.560  20.779   3.461   1.949  -0.526  C7   JRK  14  
JRK  O1   O1   O  0  1  N  N  N  21.326  10.923  28.246   0.150  -4.727  -0.707  O1   JRK  15  
JRK  O2   O2   O  0  1  N  N  N  21.512  14.011  24.985   4.238  -3.127  -0.980  O2   JRK  16  
JRK  C11  C11  C  0  1  N  N  N  20.847   8.109  19.158   0.719   4.540  -0.166  C11  JRK  17  
JRK  C12  C12  C  0  1  N  N  N  20.210  10.764  18.316   3.460   4.499  -0.220  C12  JRK  18  
JRK  C13  C13  C  0  1  N  N  N  21.367   8.214  24.286  -0.820  -0.172  -1.588  C13  JRK  19  
JRK  C14  C14  C  0  1  N  N  S  22.818   7.932  24.692  -1.809  -0.090  -0.424  C14  JRK  20  
JRK  C15  C15  C  0  1  N  N  S  22.915   6.504  25.244  -3.235   0.003  -0.971  C15  JRK  21  
JRK  O3   O3   O  0  1  N  N  N  23.660   8.029  23.553  -1.686  -1.259   0.389  O3   JRK  22  
JRK  C16  C16  C  0  1  N  N  R  24.338   5.951  25.379  -4.223   0.085   0.194  C16  JRK  23  
JRK  O4   O4   O  0  1  N  N  N  22.241   6.451  26.504  -3.358   1.172  -1.783  O4   JRK  24  
JRK  C17  C17  C  0  1  N  N  N  25.276   6.880  26.120  -5.649   0.178  -0.354  C17  JRK  25  
JRK  O5   O5   O  0  1  N  N  N  24.302   4.680  26.041  -4.101  -1.084   1.006  O5   JRK  26  
JRK  O6   O6   O  0  1  N  N  N  26.621   6.346  25.997  -6.563   0.372   0.728  O6   JRK  27  
JRK  P1   P1   P  0  1  N  N  N  27.379   5.847  27.325  -8.153   0.513   0.518  P1   JRK  28  
JRK  O7   O7   O  0  1  N  N  N  26.700   4.523  27.738  -8.743  -0.870  -0.058  O7   JRK  29  
JRK  O8   O8   O  0  1  N  N  N  27.242   6.954  28.363  -8.853   0.849   1.929  O8   JRK  30  
JRK  O9   O9   O  0  1  N  N  N  28.821   5.647  26.842  -8.429   1.605  -0.442  O9   JRK  31  
JRK  C18  C18  C  0  1  N  N  S  19.472  13.357  22.980   4.548  -0.603  -0.212  C18  JRK  32  
JRK  C19  C19  C  0  1  N  N  N  18.939  13.480  21.558   5.533   0.497  -0.455  C19  JRK  33  
JRK  C20  C20  C  0  1  N  N  N  19.992  13.039  20.523   4.957   1.905  -0.404  C20  JRK  34  
JRK  C21  C21  C  0  1  N  N  N  21.262  13.893  20.704   5.599   2.680  -1.570  C21  JRK  35  
JRK  C22  C22  C  0  1  N  N  N  19.390  13.354  19.147   5.432   2.523   0.920  C22  JRK  36  
JRK  C23  C23  C  0  1  N  N  N  18.963  12.096  24.862   2.778  -1.333   1.058  C23  JRK  37  
JRK  C24  C24  C  0  1  N  N  N  18.440  13.040  24.043   4.003  -0.765   1.182  C24  JRK  38  
JRK  C25  C25  C  0  1  N  N  N  18.333  11.322  25.976   1.840  -1.682   2.185  C25  JRK  39  
JRK  C26  C26  C  0  1  N  N  N  17.242  13.690  24.080   4.655  -0.419   2.453  C26  JRK  40  
JRK  O10  O10  O  0  1  N  N  N  17.242  14.933  24.104   5.894   0.112   2.452  O10  JRK  41  
JRK  O11  O11  O  0  1  N  N  N  16.244  12.976  24.021   4.078  -0.613   3.505  O11  JRK  42  
JRK  H1   H1   H  0  1  N  N  N  21.255   7.919  21.788  -0.410   2.133  -0.574  H1   JRK  43  
JRK  H2   H2   H  0  1  N  N  N  21.731  13.237  27.372   2.564  -4.840  -1.066  H2   JRK  44  
JRK  H3   H3   H  0  1  N  N  N  21.876   8.054  18.774   0.571   5.034  -1.126  H3   JRK  45  
JRK  H4   H4   H  0  1  N  N  N  20.580   7.152  19.630  -0.248   4.375   0.310  H4   JRK  46  
JRK  H5   H5   H  0  1  N  N  N  20.156   8.313  18.327   1.337   5.169   0.475  H5   JRK  47  
JRK  H6   H6   H  0  1  N  N  N  19.148  10.616  18.072   3.512   4.764   0.836  H6   JRK  48  
JRK  H7   H7   H  0  1  N  N  N  20.504  11.794  18.064   4.468   4.452  -0.632  H7   JRK  49  
JRK  H8   H8   H  0  1  N  N  N  20.821  10.056  17.737   2.883   5.253  -0.756  H8   JRK  50  
JRK  H9   H9   H  0  1  N  N  N  20.721   8.021  25.155  -0.914   0.720  -2.208  H9   JRK  51  
JRK  H10  H10  H  0  1  N  N  N  21.097   7.529  23.469  -1.037  -1.056  -2.188  H10  JRK  52  
JRK  H11  H11  H  0  1  N  N  N  23.125   8.646  25.471  -1.591   0.794   0.176  H11  JRK  53  
JRK  H12  H12  H  0  1  N  N  N  22.381   5.850  24.539  -3.452  -0.881  -1.571  H12  JRK  54  
JRK  H13  H13  H  0  1  N  N  N  24.559   7.854  23.807  -1.866  -2.085  -0.081  H13  JRK  55  
JRK  H14  H14  H  0  1  N  N  N  24.737   5.811  24.364  -4.006   0.969   0.794  H14  JRK  56  
JRK  H15  H15  H  0  1  N  N  N  22.295   5.570  26.856  -3.178   1.998  -1.314  H15  JRK  57  
JRK  H16  H16  H  0  1  N  N  N  25.231   7.887  25.678  -5.720   1.019  -1.043  H16  JRK  58  
JRK  H17  H17  H  0  1  N  N  N  24.990   6.932  27.181  -5.898  -0.744  -0.878  H17  JRK  59  
JRK  H18  H18  H  0  1  N  N  N  25.185   4.340  26.123  -4.280  -1.910   0.537  H18  JRK  60  
JRK  H19  H19  H  0  1  N  N  N  27.308   3.803  27.617  -8.598  -1.631   0.521  H19  JRK  61  
JRK  H20  H20  H  0  1  N  N  N  28.095   7.336  28.534  -9.813   0.948   1.878  H20  JRK  62  
JRK  H21  H21  H  0  1  N  N  N  19.945  14.314  23.245   5.059  -1.542  -0.486  H21  JRK  63  
JRK  H22  H22  H  0  1  N  N  N  18.667  14.529  21.367   6.350   0.428   0.276  H22  JRK  64  
JRK  H23  H23  H  0  1  N  N  N  18.047  12.845  21.454   5.991   0.352  -1.446  H23  JRK  65  
JRK  H24  H24  H  0  1  N  N  N  21.710  13.682  21.686   5.521   3.750  -1.381  H24  JRK  66  
JRK  H25  H25  H  0  1  N  N  N  21.984  13.648  19.912   6.649   2.401  -1.657  H25  JRK  67  
JRK  H26  H26  H  0  1  N  N  N  20.998  14.959  20.643   5.080   2.436  -2.497  H26  JRK  68  
JRK  H27  H27  H  0  1  N  N  N  18.481  12.753  18.998   5.130   3.569   0.961  H27  JRK  69  
JRK  H28  H28  H  0  1  N  N  N  19.136  14.423  19.094   4.984   1.982   1.754  H28  JRK  70  
JRK  H29  H29  H  0  1  N  N  N  20.122  13.112  18.362   6.518   2.455   0.984  H29  JRK  71  
JRK  H30  H30  H  0  1  N  N  N  19.076  10.640  26.415   2.043  -2.698   2.524  H30  JRK  72  
JRK  H31  H31  H  0  1  N  N  N  17.973  12.018  26.748   1.990  -0.987   3.011  H31  JRK  73  
JRK  H32  H32  H  0  1  N  N  N  17.487  10.739  25.584   0.811  -1.614   1.834  H32  JRK  74  
JRK  H33  H33  H  0  1  N  N  N  16.347  15.251  24.070   6.282   0.323   3.312  H33  JRK  75  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JRK  C12  C8   SING  N  N   1  
JRK  C22  C20  SING  N  N   2  
JRK  C11  C9   SING  N  N   3  
JRK  C8   C9   DOUB  Y  N   4  
JRK  C8   C7   SING  Y  N   5  
JRK  C9   C10  SING  Y  N   6  
JRK  C20  C21  SING  N  N   7  
JRK  C20  C7   SING  N  N   8  
JRK  C20  C19  SING  N  N   9  
JRK  C7   C5   DOUB  Y  N  10  
JRK  C10  C6   DOUB  Y  N  11  
JRK  C19  C18  SING  N  N  12  
JRK  C5   C6   SING  Y  N  13  
JRK  C5   N3   SING  N  N  14  
JRK  C6   N4   SING  N  N  15  
JRK  C18  N3   SING  N  N  16  
JRK  C18  C24  SING  N  N  17  
JRK  N3   C3   SING  N  N  18  
JRK  O3   C14  SING  N  N  19  
JRK  N4   C13  SING  N  N  20  
JRK  N4   C4   SING  N  N  21  
JRK  O11  C26  DOUB  N  N  22  
JRK  C24  C26  SING  N  N  23  
JRK  C24  C23  DOUB  N  N  24  
JRK  C26  O10  SING  N  N  25  
JRK  C13  C14  SING  N  N  26  
JRK  C3   C23  SING  N  N  27  
JRK  C3   C4   SING  N  N  28  
JRK  C3   C2   SING  N  N  29  
JRK  C14  C15  SING  N  N  30  
JRK  C23  C25  SING  N  N  31  
JRK  C4   N2   DOUB  N  N  32  
JRK  O2   C2   DOUB  N  N  33  
JRK  C15  C16  SING  N  N  34  
JRK  C15  O4   SING  N  N  35  
JRK  C16  O5   SING  N  N  36  
JRK  C16  C17  SING  N  N  37  
JRK  C2   N1   SING  N  N  38  
JRK  O6   C17  SING  N  N  39  
JRK  O6   P1   SING  N  N  40  
JRK  N2   C1   SING  N  N  41  
JRK  N1   C1   SING  N  N  42  
JRK  O9   P1   DOUB  N  N  43  
JRK  C1   O1   DOUB  N  N  44  
JRK  P1   O7   SING  N  N  45  
JRK  P1   O8   SING  N  N  46  
JRK  C10  H1   SING  N  N  47  
JRK  N1   H2   SING  N  N  48  
JRK  C11  H3   SING  N  N  49  
JRK  C11  H4   SING  N  N  50  
JRK  C11  H5   SING  N  N  51  
JRK  C12  H6   SING  N  N  52  
JRK  C12  H7   SING  N  N  53  
JRK  C12  H8   SING  N  N  54  
JRK  C13  H9   SING  N  N  55  
JRK  C13  H10  SING  N  N  56  
JRK  C14  H11  SING  N  N  57  
JRK  C15  H12  SING  N  N  58  
JRK  O3   H13  SING  N  N  59  
JRK  C16  H14  SING  N  N  60  
JRK  O4   H15  SING  N  N  61  
JRK  C17  H16  SING  N  N  62  
JRK  C17  H17  SING  N  N  63  
JRK  O5   H18  SING  N  N  64  
JRK  O7   H19  SING  N  N  65  
JRK  O8   H20  SING  N  N  66  
JRK  C18  H21  SING  N  N  67  
JRK  C19  H22  SING  N  N  68  
JRK  C19  H23  SING  N  N  69  
JRK  C21  H24  SING  N  N  70  
JRK  C21  H25  SING  N  N  71  
JRK  C21  H26  SING  N  N  72  
JRK  C22  H27  SING  N  N  73  
JRK  C22  H28  SING  N  N  74  
JRK  C22  H29  SING  N  N  75  
JRK  C25  H30  SING  N  N  76  
JRK  C25  H31  SING  N  N  77  
JRK  C25  H32  SING  N  N  78  
JRK  O10  H33  SING  N  N  79  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JRK  InChI             InChI                 1.03   "InChI=1S/C26H33N4O11P/c1-10-6-13-19-18(11(10)2)25(4,5)7-14-17(21(34)35)12(3)26(30(14)19)22(27-24(37)28-23(26)36)29(13)8-15(31)20(33)16(32)9-41-42(38,39)40/h6,14-16,20,31-33H,7-9H2,1-5H3,(H,34,35)(H,28,36,37)(H2,38,39,40)/t14-,15-,16+,20-,26-/m0/s1"  
JRK  InChIKey          InChI                 1.03   YDFPPSZXINEINN-HHMFRQPQSA-N  
JRK  SMILES_CANONICAL  CACTVS                3.385  "Cc1cc2N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)C3=NC(=O)NC(=O)[C@@]34[N@@]5[C@@H](CC(C)(C)c(c1C)c25)C(=C4C)C(O)=O"  
JRK  SMILES            CACTVS                3.385  "Cc1cc2N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)C3=NC(=O)NC(=O)[C]34[N]5[CH](CC(C)(C)c(c1C)c25)C(=C4C)C(O)=O"  
JRK  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1cc2c3c(c1C)C(C[C@@H]4[N@]3[C@]5(C(=C4C(=O)O)C)C(=O)NC(=O)N=C5N2C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)(C)C"  
JRK  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1cc2c3c(c1C)C(CC4N3C5(C(=C4C(=O)O)C)C(=O)NC(=O)N=C5N2CC(C(C(COP(=O)(O)O)O)O)O)(C)C"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JRK  "Create component"  2019-03-21  RCSB  
JRK  "Initial release"   2019-08-28  RCSB  
##
