data_2RK
# 
_chem_comp.id                                    2RK 
_chem_comp.name                                  "4-[(5Z)-5-(1-nitroso-2,3-dihydro-5H-inden-5-ylidene)-2-(piperidin-4-yl)-3,5-dihydro-4H-imidazol-4-ylidene]-1,4-dihydropyridine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H23 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-01-13 
_chem_comp.pdbx_modified_date                    2014-02-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        373.451 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2RK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4O7C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2RK C01  C01  C 0 1 N N N 114.137 -8.156  2.665  4.234  1.661  -1.052 C01  2RK 1  
2RK C02  C02  C 0 1 N N N 113.065 -8.427  3.753  5.682  2.154  -1.097 C02  2RK 2  
2RK N03  N03  N 0 1 N N N 112.944 -9.864  4.050  6.196  2.293  0.272  N03  2RK 3  
2RK C04  C04  C 0 1 N N N 114.210 -10.452 4.529  6.199  1.002  0.971  C04  2RK 4  
2RK C05  C05  C 0 1 N N N 115.327 -10.268 3.473  4.766  0.474  1.077  C05  2RK 5  
2RK C06  C06  C 0 1 N N N 115.502 -8.785  3.074  4.181  0.313  -0.328 C06  2RK 6  
2RK C07  C07  C 0 1 N N N 116.553 -8.652  2.031  2.750  -0.148 -0.228 C07  2RK 7  
2RK N08  N08  N 0 1 N N N 117.712 -8.015  2.202  1.705  0.633  -0.247 N08  2RK 8  
2RK C09  C09  C 0 1 N N N 118.434 -8.113  1.085  0.587  -0.104 -0.139 C09  2RK 9  
2RK C10  C10  C 0 1 N N N 119.707 -7.540  0.996  -0.802 0.406  -0.120 C10  2RK 10 
2RK C11  C11  C 0 1 N N N 120.753 -8.128  0.220  -1.852 -0.408 -0.552 C11  2RK 11 
2RK C12  C12  C 0 1 N N N 122.047 -7.544  0.181  -3.132 0.063  -0.534 C12  2RK 12 
2RK C13  C13  C 0 1 N N N 122.312 -6.363  0.867  -3.400 1.366  -0.084 C13  2RK 13 
2RK C14  C14  C 0 1 N N N 123.438 -5.605  0.943  -4.685 2.082  0.023  C14  2RK 14 
2RK C15  C15  C 0 1 N N N 123.236 -4.458  1.814  -4.408 3.462  0.569  C15  2RK 15 
2RK C16  C16  C 0 1 N N N 121.770 -4.561  2.243  -2.888 3.519  0.778  C16  2RK 16 
2RK C17  C17  C 0 1 N N N 121.307 -5.781  1.593  -2.349 2.176  0.346  C17  2RK 17 
2RK C18  C18  C 0 1 N N N 120.026 -6.347  1.704  -1.066 1.699  0.334  C18  2RK 18 
2RK N19  N19  N 0 1 N N N 124.569 -5.819  0.348  -5.850 1.609  -0.297 N19  2RK 19 
2RK O20  O20  O 0 1 N N N 125.440 -4.967  0.332  -5.948 0.475  -0.730 O20  2RK 20 
2RK C21  C21  C 0 1 N N N 117.702 -8.851  0.147  0.978  -1.435 -0.048 C21  2RK 21 
2RK C22  C22  C 0 1 N N N 117.964 -9.217  -1.186 0.102  -2.605 0.082  C22  2RK 22 
2RK C23  C23  C 0 1 N N N 118.650 -8.369  -2.042 0.517  -3.870 -0.380 C23  2RK 23 
2RK C24  C24  C 0 1 N N N 118.898 -8.711  -3.324 -0.318 -4.931 -0.245 C24  2RK 24 
2RK N25  N25  N 0 1 N N N 118.458 -9.895  -3.793 -1.530 -4.785 0.324  N25  2RK 25 
2RK C26  C26  C 0 1 N N N 117.770 -10.738 -2.996 -1.957 -3.591 0.776  C26  2RK 26 
2RK C27  C27  C 0 1 N N N 117.515 -10.419 -1.707 -1.170 -2.490 0.677  C27  2RK 27 
2RK N28  N28  N 0 1 N N N 116.549 -9.168  0.776  2.355  -1.432 -0.113 N28  2RK 28 
2RK H011 H011 H 0 0 N N N 114.261 -7.070  2.542  3.619  2.386  -0.518 H011 2RK 29 
2RK H012 H012 H 0 0 N N N 113.806 -8.597  1.713  3.858  1.544  -2.069 H012 2RK 30 
2RK H022 H022 H 0 0 N N N 113.348 -7.895  4.673  6.293  1.436  -1.643 H022 2RK 31 
2RK H021 H021 H 0 0 N N N 112.093 -8.053  3.398  5.722  3.121  -1.599 H021 2RK 32 
2RK H031 H031 H 0 0 N N N 112.246 -9.988  4.755  7.116  2.706  0.272  H031 2RK 33 
2RK H041 H041 H 0 0 N N N 114.062 -11.526 4.716  6.808  0.289  0.415  H041 2RK 34 
2RK H042 H042 H 0 0 N N N 114.510 -9.955  5.463  6.613  1.131  1.971  H042 2RK 35 
2RK H051 H051 H 0 0 N N N 115.068 -10.850 2.576  4.770  -0.491 1.583  H051 2RK 36 
2RK H052 H052 H 0 0 N N N 116.275 -10.639 3.890  4.160  1.180  1.646  H052 2RK 37 
2RK H061 H061 H 0 0 N N N 115.847 -8.248  3.970  4.764  -0.421 -0.884 H061 2RK 38 
2RK H111 H111 H 0 0 N N N 120.557 -9.028  -0.344 -1.650 -1.411 -0.899 H111 2RK 39 
2RK H121 H121 H 0 0 N N N 122.832 -8.021  -0.386 -3.942 -0.568 -0.868 H121 2RK 40 
2RK H152 H152 H 0 0 N N N 123.902 -4.510  2.688  -4.719 4.221  -0.148 H152 2RK 41 
2RK H151 H151 H 0 0 N N N 123.418 -3.519  1.270  -4.925 3.603  1.518  H151 2RK 42 
2RK H162 H162 H 0 0 N N N 121.197 -3.689  1.895  -2.456 4.311  0.165  H162 2RK 43 
2RK H161 H161 H 0 0 N N N 121.686 -4.643  3.337  -2.661 3.694  1.829  H161 2RK 44 
2RK H181 H181 H 0 0 N N N 119.281 -5.876  2.328  -0.255 2.327  0.672  H181 2RK 45 
2RK H231 H231 H 0 0 N N N 118.994 -7.413  -1.675 1.488  -3.993 -0.838 H231 2RK 46 
2RK H241 H241 H 0 0 N N N 119.445 -8.040  -3.969 -0.007 -5.904 -0.597 H241 2RK 47 
2RK H261 H261 H 0 0 N N N 117.419 -11.679 -3.392 -2.936 -3.510 1.226  H261 2RK 48 
2RK H271 H271 H 0 0 N N N 116.960 -11.103 -1.082 -1.519 -1.535 1.042  H271 2RK 49 
2RK H1   H1   H 0 1 N N N 118.643 -10.151 -4.742 -2.108 -5.559 0.410  H1   2RK 50 
2RK H2   H2   H 0 1 N N N 115.804 -9.703  0.377  2.934  -2.210 -0.076 H2   2RK 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2RK N25 C24  SING N N 1  
2RK N25 C26  SING N N 2  
2RK C24 C23  DOUB N N 3  
2RK C26 C27  DOUB N N 4  
2RK C23 C22  SING N N 5  
2RK C27 C22  SING N N 6  
2RK C22 C21  DOUB N N 7  
2RK C21 N28  SING N N 8  
2RK C21 C09  SING N N 9  
2RK C12 C11  DOUB N N 10 
2RK C12 C13  SING N N 11 
2RK C11 C10  SING N N 12 
2RK O20 N19  DOUB N N 13 
2RK N19 C14  SING N N 14 
2RK N28 C07  SING N N 15 
2RK C13 C14  DOUB N N 16 
2RK C13 C17  SING N N 17 
2RK C14 C15  SING N N 18 
2RK C10 C09  DOUB N Z 19 
2RK C10 C18  SING N N 20 
2RK C09 N08  SING N N 21 
2RK C17 C18  DOUB N N 22 
2RK C17 C16  SING N N 23 
2RK C15 C16  SING N N 24 
2RK C07 N08  DOUB N N 25 
2RK C07 C06  SING N N 26 
2RK C01 C06  SING N N 27 
2RK C01 C02  SING N N 28 
2RK C06 C05  SING N N 29 
2RK C05 C04  SING N N 30 
2RK C02 N03  SING N N 31 
2RK N03 C04  SING N N 32 
2RK C01 H011 SING N N 33 
2RK C01 H012 SING N N 34 
2RK C02 H022 SING N N 35 
2RK C02 H021 SING N N 36 
2RK N03 H031 SING N N 37 
2RK C04 H041 SING N N 38 
2RK C04 H042 SING N N 39 
2RK C05 H051 SING N N 40 
2RK C05 H052 SING N N 41 
2RK C06 H061 SING N N 42 
2RK C11 H111 SING N N 43 
2RK C12 H121 SING N N 44 
2RK C15 H152 SING N N 45 
2RK C15 H151 SING N N 46 
2RK C16 H162 SING N N 47 
2RK C16 H161 SING N N 48 
2RK C18 H181 SING N N 49 
2RK C23 H231 SING N N 50 
2RK C24 H241 SING N N 51 
2RK C26 H261 SING N N 52 
2RK C27 H271 SING N N 53 
2RK N25 H1   SING N N 54 
2RK N28 H2   SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2RK SMILES           ACDLabs              12.01 "O=NC2=C1C=C/C(C=C1CC2)=C\4/N=C(N\C/4=C3\C=CNC=C3)C5CCNCC5"                                                                                                                  
2RK InChI            InChI                1.03  "InChI=1S/C22H23N5O/c28-27-19-4-2-16-13-17(1-3-18(16)19)21-20(14-5-9-23-10-6-14)25-22(26-21)15-7-11-24-12-8-15/h1,3,5-6,9-10,13,15,23-24H,2,4,7-8,11-12H2,(H,25,26)/b21-17-" 
2RK InChIKey         InChI                1.03  GRRXVMYMOIITEW-FXBPSFAMSA-N                                                                                                                                                  
2RK SMILES_CANONICAL CACTVS               3.385 "O=NC1=C2C=C\C(C=C2CC1)=C3\N=C(NC3=C4C=CNC=C4)C5CCNCC5"                                                                                                                      
2RK SMILES           CACTVS               3.385 "O=NC1=C2C=CC(C=C2CC1)=C3N=C(NC3=C4C=CNC=C4)C5CCNCC5"                                                                                                                        
2RK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1CNCCC1C2=NC(=C3C=CC4=C(CCC4=C3)N=O)C(=C5C=CNC=C5)N2"                                                                                                                      
2RK SMILES           "OpenEye OEToolkits" 1.7.6 "C1CNCCC1C2=NC(=C3C=CC4=C(CCC4=C3)N=O)C(=C5C=CNC=C5)N2"                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2RK "SYSTEMATIC NAME" ACDLabs              12.01 "4-[(5Z)-5-(1-nitroso-2,3-dihydro-5H-inden-5-ylidene)-2-(piperidin-4-yl)-3,5-dihydro-4H-imidazol-4-ylidene]-1,4-dihydropyridine" 
2RK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[4-(1-nitroso-2,3-dihydroinden-5-ylidene)-2-piperidin-4-yl-1H-imidazol-5-ylidene]-1H-pyridine"                                
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2RK "Create component" 2014-01-13 RCSB 
2RK "Initial release"  2014-03-05 RCSB 
# 
