data_YNJ
#

_chem_comp.id                                   YNJ
_chem_comp.name                                 "7-{[(2S)-2-butyl-6,7-dichloro-2-cyclopentyl-1-oxo-2,3-dihydro-1H-inden-5-yl]oxy}heptanoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H34 Cl2 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-15
_chem_comp.pdbx_modified_date                   2021-03-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       469.441
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YNJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7M19
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YNJ  C11   C1   C   0  1  Y  N  N  206.902  203.828  272.101    2.144  -2.037   0.329  C11   YNJ   1  
YNJ  C12   C2   C   0  1  Y  N  N  206.386  203.099  273.169    2.556  -0.704   0.150  C12   YNJ   2  
YNJ  C13   C3   C   0  1  N  N  N  206.745  202.966  274.588    3.909  -0.138   0.082  C13   YNJ   3  
YNJ  C18   C4   C   0  1  N  N  N  203.604  203.843  269.092   -2.384  -0.551   0.103  C18   YNJ   4  
YNJ  C19   C5   C   0  1  N  N  N  203.373  203.926  267.558   -3.818  -1.083   0.160  C19   YNJ   5  
YNJ  C20   C6   C   0  1  N  N  N  203.956  205.215  266.937   -4.800   0.080   0.004  C20   YNJ   6  
YNJ  C21   C7   C   0  1  N  N  N  204.825  204.923  265.683   -6.233  -0.452   0.060  C21   YNJ   7  
YNJ  C22   C8   C   0  1  N  N  N  204.190  205.517  264.404   -7.215   0.711  -0.096  C22   YNJ   8  
YNJ  C23   C9   C   0  1  N  N  N  205.217  205.809  263.308   -8.649   0.180  -0.039  C23   YNJ   9  
YNJ  C24   C10  C   0  1  N  N  N  206.365  204.777  263.270   -9.616   1.325  -0.193  C24   YNJ  10  
YNJ  C29   C11  C   0  1  N  N  N  208.966  199.978  276.231    4.284   4.129   2.397  C29   YNJ  11  
YNJ  C01   C12  C   0  1  N  N  N  204.604  206.830  276.602    3.752   0.708  -5.076  C01   YNJ  12  
YNJ  C02   C13  C   0  1  N  N  N  204.639  205.391  277.144    4.428   1.442  -3.917  C02   YNJ  13  
YNJ  C03   C14  C   0  1  N  N  N  204.676  204.339  276.021    3.769   1.031  -2.599  C03   YNJ  14  
YNJ  C04   C15  C   0  1  N  N  N  205.230  202.980  276.518    4.445   1.765  -1.439  C04   YNJ  15  
YNJ  C05   C16  C   0  1  N  N  S  205.944  202.135  275.412    3.786   1.353  -0.121  C05   YNJ  16  
YNJ  C06   C17  C   0  1  N  N  N  204.897  201.550  274.445    2.278   1.633  -0.168  C06   YNJ  17  
YNJ  C07   C18  C   0  1  Y  N  N  205.237  202.258  272.965    1.594   0.299   0.009  C07   YNJ  18  
YNJ  C08   C19  C   0  1  Y  N  N  204.651  202.171  271.713    0.262  -0.018   0.044  C08   YNJ  19  
YNJ  C09   C20  C   0  1  Y  N  N  205.177  202.905  270.638   -0.145  -1.335   0.221  C09   YNJ  20  
YNJ  C10   C21  C   0  1  Y  N  N  206.308  203.738  270.836    0.802  -2.345   0.358  C10   YNJ  21  
YNJ  C27   C22  C   0  1  N  N  N  206.732  200.943  276.072    4.428   2.102   1.048  C27   YNJ  22  
YNJ  C28   C23  C   0  1  N  N  N  207.686  200.391  275.256    4.148   3.622   0.947  C28   YNJ  23  
YNJ  C30   C24  C   0  1  N  N  N  208.990  200.880  277.248    4.030   2.919   3.312  C30   YNJ  24  
YNJ  C31   C25  C   0  1  N  N  N  207.478  201.360  277.422    3.748   1.718   2.386  C31   YNJ  25  
YNJ  O14   O1   O   0  1  N  N  N  207.667  203.569  275.024    4.947  -0.760   0.172  O14   YNJ  26  
YNJ  O17   O2   O   0  1  N  N  N  204.572  202.818  269.344   -1.467  -1.637   0.250  O17   YNJ  27  
YNJ  O25   O3   O   0  1  N  N  N  207.522  205.112  263.645  -10.938   1.094  -0.174  O25   YNJ  28  
YNJ  O26   O4   O   0  1  N  N  N  206.146  203.603  262.865   -9.201   2.451  -0.334  O26   YNJ  29  
YNJ  CL15  CL1  CL  0  0  N  N  N  208.322  204.885  272.316    3.327  -3.296   0.506  CL15  YNJ  30  
YNJ  CL16  CL2  CL  0  0  N  N  N  206.982  204.678  269.478    0.291  -3.989   0.579  CL16  YNJ  31  
YNJ  H1    H1   H   0  1  N  N  N  203.978  204.808  269.465   -2.217  -0.060  -0.855  H1    YNJ  32  
YNJ  H2    H2   H   0  1  N  N  N  202.659  203.595  269.598   -2.230   0.166   0.910  H2    YNJ  33  
YNJ  H3    H3   H   0  1  N  N  N  202.291  203.900  267.363   -3.972  -1.799  -0.647  H3    YNJ  34  
YNJ  H4    H4   H   0  1  N  N  N  203.853  203.058  267.082   -3.986  -1.573   1.119  H4    YNJ  35  
YNJ  H5    H5   H   0  1  N  N  N  204.579  205.720  267.690   -4.646   0.797   0.811  H5    YNJ  36  
YNJ  H6    H6   H   0  1  N  N  N  203.125  205.875  266.646   -4.632   0.571  -0.955  H6    YNJ  37  
YNJ  H7    H7   H   0  1  N  N  N  204.923  203.834  265.561   -6.387  -1.168  -0.746  H7    YNJ  38  
YNJ  H8    H8   H   0  1  N  N  N  205.821  205.367  265.827   -6.401  -0.942   1.019  H8    YNJ  39  
YNJ  H9    H9   H   0  1  N  N  N  203.682  206.456  264.668   -7.061   1.428   0.711  H9    YNJ  40  
YNJ  H10   H10  H   0  1  N  N  N  203.454  204.800  264.012   -7.047   1.202  -1.055  H10   YNJ  41  
YNJ  H11   H11  H   0  1  N  N  N  205.647  206.806  263.486   -8.802  -0.537  -0.846  H11   YNJ  42  
YNJ  H12   H12  H   0  1  N  N  N  204.704  205.800  262.335   -8.816  -0.311   0.920  H12   YNJ  43  
YNJ  H13   H13  H   0  1  N  N  N  208.827  198.962  276.629    5.289   4.519   2.563  H13   YNJ  44  
YNJ  H14   H14  H   0  1  N  N  N  209.906  200.023  275.662    3.546   4.907   2.592  H14   YNJ  45  
YNJ  H15   H15  H   0  1  N  N  N  204.578  207.539  277.443    3.859  -0.368  -4.937  H15   YNJ  46  
YNJ  H16   H16  H   0  1  N  N  N  205.502  207.015  275.994    2.693   0.967  -5.103  H16   YNJ  47  
YNJ  H17   H17  H   0  1  N  N  N  203.706  206.966  275.981    4.221   1.001  -6.015  H17   YNJ  48  
YNJ  H18   H18  H   0  1  N  N  N  203.740  205.223  277.756    5.486   1.183  -3.890  H18   YNJ  49  
YNJ  H19   H19  H   0  1  N  N  N  205.536  205.271  277.769    4.320   2.518  -4.056  H19   YNJ  50  
YNJ  H20   H20  H   0  1  N  N  N  205.319  204.709  275.209    2.710   1.290  -2.625  H20   YNJ  51  
YNJ  H21   H21  H   0  1  N  N  N  203.655  204.189  275.641    3.876  -0.045  -2.460  H21   YNJ  52  
YNJ  H22   H22  H   0  1  N  N  N  204.391  202.390  276.915    5.503   1.506  -1.413  H22   YNJ  53  
YNJ  H23   H23  H   0  1  N  N  N  205.954  203.176  277.323    4.338   2.841  -1.579  H23   YNJ  54  
YNJ  H24   H24  H   0  1  N  N  N  203.879  201.808  274.773    1.997   2.308   0.640  H24   YNJ  55  
YNJ  H25   H25  H   0  1  N  N  N  204.996  200.456  274.383    2.007   2.069  -1.130  H25   YNJ  56  
YNJ  H26   H26  H   0  1  N  N  N  203.789  201.538  271.564   -0.477   0.762  -0.065  H26   YNJ  57  
YNJ  H27   H27  H   0  1  N  N  N  205.990  200.178  276.343    5.499   1.906   1.089  H27   YNJ  58  
YNJ  H28   H28  H   0  1  N  N  N  207.286  199.497  274.756    3.140   3.800   0.573  H28   YNJ  59  
YNJ  H29   H29  H   0  1  N  N  N  208.006  201.122  274.499    4.885   4.103   0.303  H29   YNJ  60  
YNJ  H30   H30  H   0  1  N  N  N  209.353  200.408  278.173    4.911   2.721   3.923  H30   YNJ  61  
YNJ  H31   H31  H   0  1  N  N  N  209.637  201.732  276.992    3.167   3.108   3.951  H31   YNJ  62  
YNJ  H32   H32  H   0  1  N  N  N  207.436  202.450  277.562    2.675   1.588   2.245  H32   YNJ  63  
YNJ  H33   H33  H   0  1  N  N  N  207.015  200.861  278.286    4.193   0.810   2.793  H33   YNJ  64  
YNJ  H34   H34  H   0  1  N  N  N  208.110  204.370  263.561  -11.519   1.860  -0.277  H34   YNJ  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YNJ  O26   C24   DOUB  N  N   1  
YNJ  C24   C23   SING  N  N   2  
YNJ  C24   O25   SING  N  N   3  
YNJ  C23   C22   SING  N  N   4  
YNJ  C22   C21   SING  N  N   5  
YNJ  C21   C20   SING  N  N   6  
YNJ  C20   C19   SING  N  N   7  
YNJ  C19   C18   SING  N  N   8  
YNJ  C18   O17   SING  N  N   9  
YNJ  O17   C09   SING  N  N  10  
YNJ  CL16  C10   SING  N  N  11  
YNJ  C09   C10   DOUB  Y  N  12  
YNJ  C09   C08   SING  Y  N  13  
YNJ  C10   C11   SING  Y  N  14  
YNJ  C08   C07   DOUB  Y  N  15  
YNJ  C11   CL15  SING  N  N  16  
YNJ  C11   C12   DOUB  Y  N  17  
YNJ  C07   C12   SING  Y  N  18  
YNJ  C07   C06   SING  N  N  19  
YNJ  C12   C13   SING  N  N  20  
YNJ  C06   C05   SING  N  N  21  
YNJ  C13   O14   DOUB  N  N  22  
YNJ  C13   C05   SING  N  N  23  
YNJ  C28   C27   SING  N  N  24  
YNJ  C28   C29   SING  N  N  25  
YNJ  C05   C27   SING  N  N  26  
YNJ  C05   C04   SING  N  N  27  
YNJ  C03   C04   SING  N  N  28  
YNJ  C03   C02   SING  N  N  29  
YNJ  C27   C31   SING  N  N  30  
YNJ  C29   C30   SING  N  N  31  
YNJ  C01   C02   SING  N  N  32  
YNJ  C30   C31   SING  N  N  33  
YNJ  C18   H1    SING  N  N  34  
YNJ  C18   H2    SING  N  N  35  
YNJ  C19   H3    SING  N  N  36  
YNJ  C19   H4    SING  N  N  37  
YNJ  C20   H5    SING  N  N  38  
YNJ  C20   H6    SING  N  N  39  
YNJ  C21   H7    SING  N  N  40  
YNJ  C21   H8    SING  N  N  41  
YNJ  C22   H9    SING  N  N  42  
YNJ  C22   H10   SING  N  N  43  
YNJ  C23   H11   SING  N  N  44  
YNJ  C23   H12   SING  N  N  45  
YNJ  C29   H13   SING  N  N  46  
YNJ  C29   H14   SING  N  N  47  
YNJ  C01   H15   SING  N  N  48  
YNJ  C01   H16   SING  N  N  49  
YNJ  C01   H17   SING  N  N  50  
YNJ  C02   H18   SING  N  N  51  
YNJ  C02   H19   SING  N  N  52  
YNJ  C03   H20   SING  N  N  53  
YNJ  C03   H21   SING  N  N  54  
YNJ  C04   H22   SING  N  N  55  
YNJ  C04   H23   SING  N  N  56  
YNJ  C06   H24   SING  N  N  57  
YNJ  C06   H25   SING  N  N  58  
YNJ  C08   H26   SING  N  N  59  
YNJ  C27   H27   SING  N  N  60  
YNJ  C28   H28   SING  N  N  61  
YNJ  C28   H29   SING  N  N  62  
YNJ  C30   H30   SING  N  N  63  
YNJ  C30   H31   SING  N  N  64  
YNJ  C31   H32   SING  N  N  65  
YNJ  C31   H33   SING  N  N  66  
YNJ  O25   H34   SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YNJ  SMILES            ACDLabs               12.01  "O=C(O)CCCCCCOc1cc2CC(CCCC)(C(=O)c2c(Cl)c1Cl)C1CCCC1"  
YNJ  InChI             InChI                 1.03   "InChI=1S/C25H34Cl2O4/c1-2-3-13-25(18-10-7-8-11-18)16-17-15-19(22(26)23(27)21(17)24(25)30)31-14-9-5-4-6-12-20(28)29/h15,18H,2-14,16H2,1H3,(H,28,29)/t25-/m0/s1"  
YNJ  InChIKey          InChI                 1.03   FIDRMVPJOHBYQH-VWLOTQADSA-N  
YNJ  SMILES_CANONICAL  CACTVS                3.385  "CCCC[C@]1(Cc2cc(OCCCCCCC(O)=O)c(Cl)c(Cl)c2C1=O)C3CCCC3"  
YNJ  SMILES            CACTVS                3.385  "CCCC[C]1(Cc2cc(OCCCCCCC(O)=O)c(Cl)c(Cl)c2C1=O)C3CCCC3"  
YNJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCC[C@]1(Cc2cc(c(c(c2C1=O)Cl)Cl)OCCCCCCC(=O)O)C3CCCC3"  
YNJ  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCC1(Cc2cc(c(c(c2C1=O)Cl)Cl)OCCCCCCC(=O)O)C3CCCC3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YNJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "7-{[(2S)-2-butyl-6,7-dichloro-2-cyclopentyl-1-oxo-2,3-dihydro-1H-inden-5-yl]oxy}heptanoic acid"  
YNJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "7-[[(2~{S})-2-butyl-6,7-bis(chloranyl)-2-cyclopentyl-1-oxidanylidene-3~{H}-inden-5-yl]oxy]heptanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YNJ  "Create component"  2021-03-15  RCSB  
YNJ  "Initial release"   2021-03-24  RCSB  
##
