data_SPJ
#

_chem_comp.id                                   SPJ
_chem_comp.name                                 "(3R,3'R)-N~1~,N~1~'-butane-1,4-diyldibutane-1,3-diamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H30 N4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "bis-(3R,3'R)-methyl spermine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-12-19
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       230.393
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SPJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3BNM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SPJ  N1B   N1B   N  0  1  N  N  N  117.451  29.748  74.422  -6.898  -0.950  -1.116  N1B   SPJ   1  
SPJ  C1C   C1C   C  0  1  N  N  R  118.522  30.264  75.286  -6.801  -0.212   0.150  C1C   SPJ   2  
SPJ  C1A   C1A   C  0  1  N  N  N  119.769  30.556  74.450  -8.006   0.720   0.290  C1A   SPJ   3  
SPJ  C1D   C1D   C  0  1  N  N  N  118.824  29.245  76.388  -5.513   0.613   0.163  C1D   SPJ   4  
SPJ  C1E   C1E   C  0  1  N  N  N  119.134  27.866  75.802  -4.305  -0.326   0.149  C1E   SPJ   5  
SPJ  N1F   N1F   N  0  1  N  N  N  119.539  26.960  76.887  -3.069   0.467   0.161  N1F   SPJ   6  
SPJ  C1G   C1G   C  0  1  N  N  N  119.662  25.585  76.382  -1.885  -0.404   0.148  C1G   SPJ   7  
SPJ  C1H   C1H   C  0  1  N  N  N  120.370  24.724  77.431  -0.620   0.456   0.161  C1H   SPJ   8  
SPJ  C1I   C1I   C  0  1  N  N  N  120.471  23.263  76.989   0.613  -0.451   0.147  C1I   SPJ   9  
SPJ  C1J   C1J   C  0  1  N  N  N  121.114  23.154  75.604   1.878   0.409   0.161  C1J   SPJ  10  
SPJ  N1K   N1K   N  0  1  N  N  N  121.318  21.740  75.260   3.062  -0.461   0.148  N1K   SPJ  11  
SPJ  C1L   C1L   C  0  1  N  N  N  122.567  21.267  75.875   4.298   0.331   0.160  C1L   SPJ  12  
SPJ  C1M   C1M   C  0  1  N  N  N  122.815  19.809  75.485   5.506  -0.608   0.146  C1M   SPJ  13  
SPJ  C1N   C1N   C  0  1  N  N  R  122.841  19.638  73.965   6.794   0.218   0.158  C1N   SPJ  14  
SPJ  C1P   C1P   C  0  1  N  N  N  123.225  18.208  73.580   7.999  -0.719   0.270  C1P   SPJ  15  
SPJ  N1O   N1O   N  0  1  N  N  N  121.513  19.951  73.417   6.891   0.993  -1.086  N1O   SPJ  16  
SPJ  HN1B  HN1B  H  0  0  N  N  N  116.616  29.631  74.959  -6.082  -1.525  -1.262  HN1B  SPJ  17  
SPJ  HN1A  HN1A  H  0  0  N  N  N  117.281  30.396  73.679  -7.741  -1.503  -1.149  HN1A  SPJ  18  
SPJ  H1C   H1C   H  0  1  N  N  N  118.199  31.204  75.758  -6.789  -0.917   0.982  H1C   SPJ  19  
SPJ  H1A   H1A   H  0  1  N  N  N  119.491  30.626  73.388  -8.018   1.426  -0.541  H1A   SPJ  20  
SPJ  H1AA  H1AA  H  0  0  N  N  N  120.214  31.508  74.776  -8.924   0.132   0.281  H1AA  SPJ  21  
SPJ  H1AB  H1AB  H  0  0  N  N  N  120.499  29.744  74.585  -7.935   1.268   1.230  H1AB  SPJ  22  
SPJ  H1D   H1D   H  0  1  N  N  N  119.696  29.591  76.963  -5.484   1.255  -0.717  H1D   SPJ  23  
SPJ  H1DA  H1DA  H  0  0  N  N  N  117.937  29.157  77.033  -5.485   1.229   1.062  H1DA  SPJ  24  
SPJ  H1E   H1E   H  0  1  N  N  N  118.238  27.467  75.304  -4.334  -0.968   1.029  H1E   SPJ  25  
SPJ  H1EA  H1EA  H  0  0  N  N  N  119.949  27.951  75.068  -4.334  -0.941  -0.750  H1EA  SPJ  26  
SPJ  HN1F  HN1F  H  0  0  N  N  N  120.422  27.257  77.252  -3.048   1.117  -0.611  HN1F  SPJ  27  
SPJ  H1G   H1G   H  0  1  N  N  N  118.661  25.175  76.184  -1.897  -1.046   1.028  H1G   SPJ  28  
SPJ  H1GA  H1GA  H  0  0  N  N  N  120.246  25.585  75.450  -1.897  -1.019  -0.751  H1GA  SPJ  29  
SPJ  H1H   H1H   H  0  1  N  N  N  121.386  25.118  77.584  -0.608   1.099  -0.719  H1H   SPJ  30  
SPJ  H1HA  H1HA  H  0  0  N  N  N  119.783  24.763  78.361  -0.608   1.072   1.061  H1HA  SPJ  31  
SPJ  H1I   H1I   H  0  1  N  N  N  121.087  22.711  77.714   0.601  -1.093   1.028  H1I   SPJ  32  
SPJ  H1IA  H1IA  H  0  0  N  N  N  119.457  22.839  76.941   0.601  -1.066  -0.752  H1IA  SPJ  33  
SPJ  H1J   H1J   H  0  1  N  N  N  120.453  23.619  74.858   1.890   1.052  -0.720  H1J   SPJ  34  
SPJ  H1JA  H1JA  H  0  0  N  N  N  122.086  23.670  75.613   1.890   1.025   1.060  H1JA  SPJ  35  
SPJ  HN1K  HN1K  H  0  0  N  N  N  120.550  21.198  75.602   3.041  -1.111   0.919  HN1K  SPJ  36  
SPJ  H1L   H1L   H  0  1  N  N  N  123.405  21.887  75.523   4.327   0.973  -0.721  H1L   SPJ  37  
SPJ  H1LA  H1LA  H  0  0  N  N  N  122.485  21.342  76.969   4.327   0.946   1.059  H1LA  SPJ  38  
SPJ  H1M   H1M   H  0  1  N  N  N  123.785  19.491  75.896   5.477  -1.250   1.026  H1M   SPJ  39  
SPJ  H1MA  H1MA  H  0  0  N  N  N  121.997  19.196  75.891   5.478  -1.223  -0.754  H1MA  SPJ  40  
SPJ  H1N   H1N   H  0  1  N  N  N  123.594  20.324  73.550   6.782   0.897   1.010  H1N   SPJ  41  
SPJ  H1P   H1P   H  0  1  N  N  N  123.317  18.134  72.486   8.011  -1.398  -0.582  H1P   SPJ  42  
SPJ  H1PA  H1PA  H  0  0  N  N  N  124.186  17.948  74.047   8.917  -0.131   0.279  H1PA  SPJ  43  
SPJ  H1PB  H1PB  H  0  0  N  N  N  122.447  17.513  73.930   7.927  -1.295   1.193  H1PB  SPJ  44  
SPJ  HN1O  HN1O  H  0  0  N  N  N  120.852  20.022  74.164   7.700   1.596  -1.074  HN1O  SPJ  45  
SPJ  HN1C  HN1C  H  0  0  N  N  N  121.553  20.820  72.923   6.904   0.386  -1.891  HN1C  SPJ  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SPJ  N1B  C1C   SING  N  N   1  
SPJ  C1C  C1A   SING  N  N   2  
SPJ  C1C  C1D   SING  N  N   3  
SPJ  C1D  C1E   SING  N  N   4  
SPJ  C1E  N1F   SING  N  N   5  
SPJ  N1F  C1G   SING  N  N   6  
SPJ  C1G  C1H   SING  N  N   7  
SPJ  C1H  C1I   SING  N  N   8  
SPJ  C1I  C1J   SING  N  N   9  
SPJ  C1J  N1K   SING  N  N  10  
SPJ  N1K  C1L   SING  N  N  11  
SPJ  C1L  C1M   SING  N  N  12  
SPJ  C1M  C1N   SING  N  N  13  
SPJ  C1N  C1P   SING  N  N  14  
SPJ  C1N  N1O   SING  N  N  15  
SPJ  N1B  HN1B  SING  N  N  16  
SPJ  N1B  HN1A  SING  N  N  17  
SPJ  C1C  H1C   SING  N  N  18  
SPJ  C1A  H1A   SING  N  N  19  
SPJ  C1A  H1AA  SING  N  N  20  
SPJ  C1A  H1AB  SING  N  N  21  
SPJ  C1D  H1D   SING  N  N  22  
SPJ  C1D  H1DA  SING  N  N  23  
SPJ  C1E  H1E   SING  N  N  24  
SPJ  C1E  H1EA  SING  N  N  25  
SPJ  N1F  HN1F  SING  N  N  26  
SPJ  C1G  H1G   SING  N  N  27  
SPJ  C1G  H1GA  SING  N  N  28  
SPJ  C1H  H1H   SING  N  N  29  
SPJ  C1H  H1HA  SING  N  N  30  
SPJ  C1I  H1I   SING  N  N  31  
SPJ  C1I  H1IA  SING  N  N  32  
SPJ  C1J  H1J   SING  N  N  33  
SPJ  C1J  H1JA  SING  N  N  34  
SPJ  N1K  HN1K  SING  N  N  35  
SPJ  C1L  H1L   SING  N  N  36  
SPJ  C1L  H1LA  SING  N  N  37  
SPJ  C1M  H1M   SING  N  N  38  
SPJ  C1M  H1MA  SING  N  N  39  
SPJ  C1N  H1N   SING  N  N  40  
SPJ  C1P  H1P   SING  N  N  41  
SPJ  C1P  H1PA  SING  N  N  42  
SPJ  C1P  H1PB  SING  N  N  43  
SPJ  N1O  HN1O  SING  N  N  44  
SPJ  N1O  HN1C  SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SPJ  SMILES            ACDLabs               10.04  "NC(CCNCCCCNCCC(N)C)C"  
SPJ  SMILES_CANONICAL  CACTVS                3.341  "C[C@@H](N)CCNCCCCNCC[C@@H](C)N"  
SPJ  SMILES            CACTVS                3.341  "C[CH](N)CCNCCCCNCC[CH](C)N"  
SPJ  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H](CCNCCCCNCC[C@@H](C)N)N"  
SPJ  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(CCNCCCCNCCC(C)N)N"  
SPJ  InChI             InChI                 1.03   "InChI=1S/C12H30N4/c1-11(13)5-9-15-7-3-4-8-16-10-6-12(2)14/h11-12,15-16H,3-10,13-14H2,1-2H3/t11-,12-/m1/s1"  
SPJ  InChIKey          InChI                 1.03   LXKFTCVCBKNJNM-VXGBXAGGSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SPJ  "SYSTEMATIC NAME"  ACDLabs               10.04  "(3R,3'R)-N~1~,N~1~'-butane-1,4-diyldibutane-1,3-diamine"  
SPJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(3R)-N-[4-[[(3R)-3-aminobutyl]amino]butyl]butane-1,3-diamine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SPJ  "Create component"   2007-12-19  RCSB  
SPJ  "Modify descriptor"  2011-06-04  RCSB  
SPJ  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SPJ
_pdbx_chem_comp_synonyms.name        "bis-(3R,3'R)-methyl spermine"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
