data_ECJ
# 
_chem_comp.id                                    ECJ 
_chem_comp.name                                  "(5R)-5-(6-amino-9H-purin-9-yl)-2-({[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}methyl)-4-oxo-4,5-dihydrofuran-3-yl trihydrogen diphosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H13 N5 O16 P4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-12-27 
_chem_comp.pdbx_modified_date                    2018-01-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        583.129 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ECJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BYU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ECJ C10 C1  C 0 1 N N N 4.324  -76.371 -5.995 1.025  0.424  1.139  C10 ECJ 1  
ECJ C11 C2  C 0 1 N N N 4.308  -76.683 -4.520 -0.322 -0.219 0.934  C11 ECJ 2  
ECJ C13 C3  C 0 1 N N N 5.078  -77.941 -4.285 -0.534 -1.261 0.112  C13 ECJ 3  
ECJ C15 C4  C 0 1 N N N 4.136  -78.960 -4.722 -1.900 -1.621 0.150  C15 ECJ 4  
ECJ C17 C5  C 0 1 N N R 2.828  -78.416 -4.194 -2.530 -0.646 1.126  C17 ECJ 5  
ECJ C19 C6  C 0 1 Y N N 1.206  -77.970 -5.932 -3.382 1.393  -0.091 C19 ECJ 6  
ECJ C21 C7  C 0 1 Y N N -0.129 -79.720 -5.822 -5.465 0.879  -0.411 C21 ECJ 7  
ECJ C22 C8  C 0 1 Y N N -1.103 -80.737 -5.933 -6.827 0.783  -0.740 C22 ECJ 8  
ECJ C25 C9  C 0 1 Y N N -0.059 -81.888 -4.201 -6.879 -1.308 0.237  C25 ECJ 9  
ECJ C28 C10 C 0 1 Y N N 0.876  -79.854 -4.859 -4.867 -0.198 0.263  C28 ECJ 10 
ECJ N18 N1  N 0 1 Y N N 1.684  -78.742 -4.970 -3.556 0.156  0.456  N18 ECJ 11 
ECJ N20 N2  N 0 1 Y N N 0.114  -78.540 -6.464 -4.503 1.816  -0.599 N20 ECJ 12 
ECJ N23 N3  N 0 1 N N N -2.150 -80.651 -6.905 -7.470 1.812  -1.405 N23 ECJ 13 
ECJ N24 N4  N 0 1 Y N N -1.018 -81.802 -5.089 -7.484 -0.321 -0.398 N24 ECJ 14 
ECJ N27 N5  N 0 1 Y N N 0.871  -80.963 -4.063 -5.605 -1.262 0.564  N27 ECJ 15 
ECJ O02 O1  O 0 1 N N N 0.669  -73.658 -6.317 1.850  6.234  -1.618 O02 ECJ 16 
ECJ O03 O2  O 0 1 N N N -0.037 -72.784 -8.537 3.881  4.741  -1.480 O03 ECJ 17 
ECJ O04 O3  O 0 1 N N N 2.088  -72.106 -7.543 3.402  6.226  0.504  O04 ECJ 18 
ECJ O05 O4  O 0 1 N N N 1.891  -74.432 -8.399 1.902  4.135  -0.035 O05 ECJ 19 
ECJ O07 O5  O 0 1 N N N 3.546  -76.243 -8.809 3.413  2.115  0.042  O07 ECJ 20 
ECJ O08 O6  O 0 1 N N N 4.353  -74.065 -8.066 2.633  3.059  2.249  O08 ECJ 21 
ECJ O09 O7  O 0 1 N N N 3.189  -75.598 -6.427 0.989  1.768  0.654  O09 ECJ 22 
ECJ O12 O8  O 0 1 N N N 2.965  -77.004 -4.096 -1.442 0.182  1.558  O12 ECJ 23 
ECJ O14 O9  O 0 1 N N N 5.350  -78.069 -2.918 0.421  -1.875 -0.642 O14 ECJ 24 
ECJ O16 O10 O 0 1 N N N 4.454  -80.205 -4.186 -2.449 -2.514 -0.464 O16 ECJ 25 
ECJ O30 O11 O 0 1 N N N 6.605  -77.444 -0.890 0.035  -4.286 0.332  O30 ECJ 26 
ECJ O31 O12 O 0 1 N N N 6.938  -76.044 -2.862 1.685  -2.692 1.384  O31 ECJ 27 
ECJ O32 O13 O 0 1 N N N 7.936  -78.493 -2.834 2.309  -3.693 -0.848 O32 ECJ 28 
ECJ O34 O14 O 0 1 N N N 6.684  -80.683 -2.574 4.148  -5.166 -2.014 O34 ECJ 29 
ECJ O35 O15 O 0 1 N N N 9.020  -80.702 -3.346 4.697  -3.910 0.229  O35 ECJ 30 
ECJ O36 O16 O 0 1 N N N 7.264  -79.945 -4.896 3.098  -5.862 0.173  O36 ECJ 31 
ECJ P01 P1  P 0 1 N N N 1.145  -73.223 -7.681 2.783  5.321  -0.675 P01 ECJ 32 
ECJ P06 P2  P 0 1 N N N 3.245  -75.071 -7.939 2.260  2.755  0.713  P06 ECJ 33 
ECJ P29 P3  P 0 1 N N N 6.685  -77.513 -2.381 1.125  -3.127 0.085  P29 ECJ 34 
ECJ P33 P4  P 0 1 N N N 7.732  -79.992 -3.431 3.553  -4.684 -0.598 P33 ECJ 35 
ECJ H1  H1  H 0 1 N N N 4.333  -77.319 -6.552 1.268  0.428  2.202  H1  ECJ 36 
ECJ H2  H2  H 0 1 N N N 5.239  -75.804 -6.222 1.783  -0.139 0.595  H2  ECJ 37 
ECJ H6  H6  H 0 1 N N N 2.689  -78.823 -3.182 -2.957 -1.181 1.974  H6  ECJ 38 
ECJ H7  H7  H 0 1 N N N 1.630  -77.026 -6.242 -2.453 1.943  -0.097 H7  ECJ 39 
ECJ H8  H8  H 0 1 N N N -0.029 -82.753 -3.555 -7.451 -2.187 0.496  H8  ECJ 40 
ECJ H9  H9  H 0 1 N N N -2.738 -81.456 -6.834 -6.980 2.612  -1.649 H9  ECJ 41 
ECJ H10 H10 H 0 1 N N N -2.692 -79.827 -6.739 -8.411 1.734  -1.626 H10 ECJ 42 
ECJ H11 H11 H 0 1 N N N -0.276 -73.570 -6.268 2.316  6.970  -2.038 H11 ECJ 43 
ECJ H12 H12 H 0 1 N N N 1.758  -71.352 -8.017 2.739  6.639  1.073  H12 ECJ 44 
ECJ H13 H13 H 0 1 N N N 5.008  -74.390 -8.673 1.922  3.479  2.751  H13 ECJ 45 
ECJ H15 H15 H 0 1 N N N 6.725  -76.545 -0.607 -0.375 -4.620 -0.478 H15 ECJ 46 
ECJ H16 H16 H 0 1 N N N 5.952  -80.946 -3.119 4.902  -5.767 -1.940 H16 ECJ 47 
ECJ H17 H17 H 0 1 N N N 9.287  -80.980 -4.214 5.043  -3.125 -0.218 H17 ECJ 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ECJ O07 P06 DOUB N N 1  
ECJ O03 P01 DOUB N N 2  
ECJ O05 P06 SING N N 3  
ECJ O05 P01 SING N N 4  
ECJ O08 P06 SING N N 5  
ECJ P06 O09 SING N N 6  
ECJ P01 O04 SING N N 7  
ECJ P01 O02 SING N N 8  
ECJ N23 C22 SING N N 9  
ECJ N20 C19 DOUB Y N 10 
ECJ N20 C21 SING Y N 11 
ECJ O09 C10 SING N N 12 
ECJ C10 C11 SING N N 13 
ECJ C22 C21 DOUB Y N 14 
ECJ C22 N24 SING Y N 15 
ECJ C19 N18 SING Y N 16 
ECJ C21 C28 SING Y N 17 
ECJ N24 C25 DOUB Y N 18 
ECJ N18 C28 SING Y N 19 
ECJ N18 C17 SING N N 20 
ECJ O36 P33 DOUB N N 21 
ECJ C28 N27 DOUB Y N 22 
ECJ C15 C13 SING N N 23 
ECJ C15 C17 SING N N 24 
ECJ C15 O16 DOUB N N 25 
ECJ C11 C13 DOUB N N 26 
ECJ C11 O12 SING N N 27 
ECJ C13 O14 SING N N 28 
ECJ C25 N27 SING Y N 29 
ECJ C17 O12 SING N N 30 
ECJ P33 O35 SING N N 31 
ECJ P33 O32 SING N N 32 
ECJ P33 O34 SING N N 33 
ECJ O14 P29 SING N N 34 
ECJ O31 P29 DOUB N N 35 
ECJ O32 P29 SING N N 36 
ECJ P29 O30 SING N N 37 
ECJ C10 H1  SING N N 38 
ECJ C10 H2  SING N N 39 
ECJ C17 H6  SING N N 40 
ECJ C19 H7  SING N N 41 
ECJ C25 H8  SING N N 42 
ECJ N23 H9  SING N N 43 
ECJ N23 H10 SING N N 44 
ECJ O02 H11 SING N N 45 
ECJ O04 H12 SING N N 46 
ECJ O08 H13 SING N N 47 
ECJ O30 H15 SING N N 48 
ECJ O34 H16 SING N N 49 
ECJ O35 H17 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ECJ SMILES           ACDLabs              12.01 "C(C1=C(OP(O)(=O)OP(O)(O)=O)C(C(O1)n3cnc2c3ncnc2N)=O)OP(OP(O)(=O)O)(=O)O" 
ECJ InChI            InChI                1.03  
"InChI=1S/C10H13N5O16P4/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7(29-35(25,26)31-33(20,21)22)4(28-10)1-27-34(23,24)30-32(17,18)19/h2-3,10H,1H2,(H,23,24)(H,25,26)(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t10-/m1/s1" 
ECJ InChIKey         InChI                1.03  CDOGMROMDFBAJR-SNVBAGLBSA-N 
ECJ SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n(cnc12)[C@@H]3OC(=C(O[P](O)(=O)O[P](O)(O)=O)C3=O)CO[P](O)(=O)O[P](O)(O)=O" 
ECJ SMILES           CACTVS               3.385 "Nc1ncnc2n(cnc12)[CH]3OC(=C(O[P](O)(=O)O[P](O)(O)=O)C3=O)CO[P](O)(=O)O[P](O)(O)=O" 
ECJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)[C@H]3C(=O)C(=C(O3)COP(=O)(O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)N" 
ECJ SMILES           "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)C3C(=O)C(=C(O3)COP(=O)(O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ECJ "SYSTEMATIC NAME" ACDLabs              12.01 "(5R)-5-(6-amino-9H-purin-9-yl)-2-({[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}methyl)-4-oxo-4,5-dihydrofuran-3-yl trihydrogen diphosphate" 
ECJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(5~{R})-5-(6-aminopurin-9-yl)-4-oxidanylidene-3-[oxidanyl(phosphonooxy)phosphoryl]oxy-furan-2-yl]methyl phosphono hydrogen phosphate"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ECJ "Create component" 2017-12-27 RCSB 
ECJ "Initial release"  2018-01-17 RCSB 
# 
