data_YRH
# 
_chem_comp.id                                    YRH 
_chem_comp.name                                  "~{N}-(5-oxidanylidene-4~{H}-[1,2]dithiolo[4,3-b]pyrrol-6-yl)hexanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H14 N2 O2 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-12-12 
_chem_comp.pdbx_modified_date                    2024-10-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        270.371 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YRH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8RDN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YRH C4  C1  C 0 1 N N N N N N 34.672 70.348 42.445 -3.103 0.092  0.061  C4  YRH 1  
YRH C6  C2  C 0 1 N N N N N N 36.088 70.341 40.816 -2.281 2.195  0.038  C6  YRH 2  
YRH C8  C3  C 0 1 N N N N N N 34.954 70.807 40.302 -1.203 1.330  -0.046 C8  YRH 3  
YRH C10 C4  C 0 1 N N N N N N 34.269 72.341 38.693 1.116  0.747  -0.085 C10 YRH 4  
YRH C13 C5  C 0 1 N N N N N N 33.732 74.697 35.874 4.916  0.289  0.022  C13 YRH 5  
YRH C15 C6  C 0 1 N N N N N N 33.837 76.290 33.905 7.263  -0.565 0.103  C15 YRH 6  
YRH C17 C7  C 0 1 N N N N N N 34.055 70.808 41.293 -1.715 0.020  -0.030 C17 YRH 7  
YRH O7  O1  O 0 1 N N N N N N 37.148 70.189 40.208 -2.210 3.417  0.052  O7  YRH 8  
YRH N5  N1  N 0 1 N N N N N N 35.932 70.067 42.102 -3.411 1.484  0.104  N5  YRH 9  
YRH C3  C8  C 0 1 N N N N N N 33.978 70.259 43.624 -3.891 -1.011 0.098  C3  YRH 10 
YRH S2  S1  S 0 1 N N N N N N 32.340 70.739 43.576 -3.045 -2.494 0.025  S2  YRH 11 
YRH S1  S2  S 0 1 N N N N N N 32.402 71.235 41.528 -1.156 -1.659 -0.087 S1  YRH 12 
YRH N9  N2  N 0 1 N N N N N N 34.739 71.132 39.024 0.159  1.695  -0.133 N9  YRH 13 
YRH O16 O2  O 0 1 N N N N N N 34.065 73.248 39.497 0.807  -0.427 -0.063 O16 YRH 14 
YRH C11 C9  C 0 1 N N N N N N 34.020 72.569 37.195 2.570  1.143  -0.058 C11 YRH 15 
YRH C12 C10 C 0 1 N N N N N N 34.676 73.867 36.758 3.440  -0.114 -0.005 C12 YRH 16 
YRH C14 C11 C 0 1 N N N N N N 34.547 75.764 35.146 5.787  -0.968 0.076  C14 YRH 17 
YRH H2  H2  H 0 1 N N N N N N 32.968 75.180 36.501 5.154  0.858  -0.877 H2  YRH 18 
YRH H3  H3  H 0 1 N N N N N N 33.242 74.041 35.139 5.109  0.903  0.902  H3  YRH 19 
YRH H4  H4  H 0 1 N N N N N N 34.463 77.053 33.419 7.501  0.004  -0.796 H4  YRH 20 
YRH H5  H5  H 0 1 N N N N N N 33.660 75.460 33.205 7.456  0.049  0.983  H5  YRH 21 
YRH H6  H6  H 0 1 N N N N N N 32.874 76.736 34.195 7.883  -1.460 0.141  H6  YRH 22 
YRH H7  H7  H 0 1 N N N N N N 36.638 69.710 42.713 -4.304 1.857  0.169  H7  YRH 23 
YRH H8  H8  H 0 1 N N N N N N 34.442 69.905 44.533 -4.967 -0.957 0.169  H8  YRH 24 
YRH H9  H9  H 0 1 N N N N N N 34.932 70.464 38.306 0.406  2.629  -0.228 H9  YRH 25 
YRH H10 H10 H 0 1 N N N N N N 32.937 72.626 37.009 2.807  1.712  -0.957 H10 YRH 26 
YRH H11 H11 H 0 1 N N N N N N 34.447 71.733 36.622 2.763  1.757  0.821  H11 YRH 27 
YRH H12 H12 H 0 1 N N N N N N 35.588 73.634 36.189 3.247  -0.727 -0.885 H12 YRH 28 
YRH H13 H13 H 0 1 N N N N N N 34.940 74.454 37.650 3.203  -0.682 0.894  H13 YRH 29 
YRH H14 H14 H 0 1 N N N N N N 35.510 75.328 34.844 5.549  -1.536 0.975  H14 YRH 30 
YRH H15 H15 H 0 1 N N N N N N 34.725 76.604 35.834 5.594  -1.581 -0.804 H15 YRH 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YRH C15 C14 SING N N 1  
YRH C14 C13 SING N N 2  
YRH C13 C12 SING N N 3  
YRH C12 C11 SING N N 4  
YRH C11 C10 SING N N 5  
YRH C10 N9  SING N N 6  
YRH C10 O16 DOUB N N 7  
YRH N9  C8  SING N N 8  
YRH O7  C6  DOUB N N 9  
YRH C8  C6  SING N N 10 
YRH C8  C17 DOUB N N 11 
YRH C6  N5  SING N N 12 
YRH C17 S1  SING N N 13 
YRH C17 C4  SING N N 14 
YRH S1  S2  SING N N 15 
YRH N5  C4  SING N N 16 
YRH C4  C3  DOUB N N 17 
YRH S2  C3  SING N N 18 
YRH C13 H2  SING N N 19 
YRH C13 H3  SING N N 20 
YRH C15 H4  SING N N 21 
YRH C15 H5  SING N N 22 
YRH C15 H6  SING N N 23 
YRH N5  H7  SING N N 24 
YRH C3  H8  SING N N 25 
YRH N9  H9  SING N N 26 
YRH C11 H10 SING N N 27 
YRH C11 H11 SING N N 28 
YRH C12 H12 SING N N 29 
YRH C12 H13 SING N N 30 
YRH C14 H14 SING N N 31 
YRH C14 H15 SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YRH InChI            InChI                1.06  "InChI=1S/C11H14N2O2S2/c1-2-3-4-5-8(14)13-9-10-7(6-16-17-10)12-11(9)15/h6H,2-5H2,1H3,(H,12,15)(H,13,14)" 
YRH InChIKey         InChI                1.06  YBDAGRFUBLIKGW-UHFFFAOYSA-N                                                                              
YRH SMILES_CANONICAL CACTVS               3.385 "CCCCCC(=O)NC1=C2SSC=C2NC1=O"                                                                            
YRH SMILES           CACTVS               3.385 "CCCCCC(=O)NC1=C2SSC=C2NC1=O"                                                                            
YRH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCC(=O)NC1=C2C(=CSS2)NC1=O"                                                                          
YRH SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCC(=O)NC1=C2C(=CSS2)NC1=O"                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           YRH 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-(5-oxidanylidene-4~{H}-[1,2]dithiolo[4,3-b]pyrrol-6-yl)hexanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YRH "Create component" 2023-12-12 PDBE 
YRH "Initial release"  2024-10-16 RCSB 
# 
