data_LMH
#

_chem_comp.id                                   LMH
_chem_comp.name                                 "glucosyl-dolichol phosphate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H55 O9 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-08-25
_chem_comp.pdbx_modified_date                   2020-03-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       602.737
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LMH
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6SNH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LMH  C01  C1   C  0  1  N  N  N  124.942  136.531  134.553   10.478  -5.916   2.152  C01  LMH   1  
LMH  C02  C2   C  0  1  N  N  N  124.382  137.881  134.065    9.831  -4.960   1.183  C02  LMH   2  
LMH  C03  C3   C  0  1  N  N  N  123.464  138.714  134.985    8.406  -5.181   0.744  C03  LMH   3  
LMH  C04  C4   C  0  1  N  N  N  124.693  138.332  132.843   10.508  -3.938   0.721  C04  LMH   4  
LMH  C05  C5   C  0  1  N  N  N  125.626  137.332  132.101    9.827  -2.916  -0.153  C05  LMH   5  
LMH  C06  C6   C  0  1  N  N  N  125.902  137.848  130.659   10.020  -1.522   0.447  C06  LMH   6  
LMH  C07  C7   C  0  1  N  N  N  126.616  136.731  129.845    9.339  -0.501  -0.427  C07  LMH   7  
LMH  C08  C8   C  0  1  N  N  N  127.063  135.436  130.548   10.060   0.071  -1.621  C08  LMH   8  
LMH  C09  C9   C  0  1  N  N  N  126.844  136.895  128.525    8.120  -0.109  -0.150  C09  LMH   9  
LMH  C10  C10  C  0  1  N  N  N  127.560  135.771  127.717    7.394   0.820  -1.088  C10  LMH  10  
LMH  C11  C11  C  0  1  N  N  N  127.553  136.133  126.199    6.055   0.199  -1.487  C11  LMH  11  
LMH  C12  C12  C  0  1  N  N  N  128.987  136.573  125.768    5.329   1.128  -2.426  C12  LMH  12  
LMH  C13  C13  C  0  1  N  N  N  129.940  137.213  126.803    5.601   1.067  -3.907  C13  LMH  13  
LMH  C14  C14  C  0  1  N  N  N  129.395  136.396  124.497    4.462   1.990  -1.955  C14  LMH  14  
LMH  C15  C15  C  0  1  N  N  N  128.438  135.753  123.455    4.296   2.153  -0.466  C15  LMH  15  
LMH  C16  C16  C  0  1  N  N  N  129.129  134.508  122.815    4.470   3.627  -0.092  C16  LMH  16  
LMH  C17  C17  C  0  1  N  N  N  129.463  134.805  121.322    4.304   3.790   1.397  C17  LMH  17  
LMH  C18  C18  C  0  1  N  N  N  129.632  136.265  120.842    5.486   3.602   2.312  C18  LMH  18  
LMH  C19  C19  C  0  1  N  N  N  129.604  133.788  120.448    3.132   4.096   1.895  C19  LMH  19  
LMH  C20  C20  C  0  1  N  N  N  129.389  132.418  121.154    1.920   4.137   1.000  C20  LMH  20  
LMH  C21  C21  C  0  1  N  N  N  129.701  131.259  120.159    0.867   3.156   1.521  C21  LMH  21  
LMH  C22  C22  C  0  1  N  N  S  129.345  129.885  120.748   -0.363   3.198   0.612  C22  LMH  22  
LMH  C23  C23  C  0  1  N  N  N  128.807  128.981  119.645   -1.016   4.579   0.702  C23  LMH  23  
LMH  C24  C24  C  0  1  N  N  N  128.275  130.061  121.831   -1.363   2.130   1.058  C24  LMH  24  
LMH  C25  C25  C  0  1  N  N  N  128.838  129.831  123.254   -2.536   2.088   0.076  C25  LMH  25  
LMH  C31  C26  C  0  1  N  N  S  128.107  125.252  123.502   -6.748  -1.084  -0.179  C31  LMH  26  
LMH  C33  C27  C  0  1  N  N  R  128.904  124.107  121.473   -9.142  -0.948  -0.128  C33  LMH  27  
LMH  C34  C28  C  0  1  N  N  N  128.977  124.226  119.969  -10.299  -0.175   0.508  C34  LMH  28  
LMH  C36  C29  C  0  1  N  N  S  128.038  122.891  121.831   -9.267  -2.433   0.222  C36  LMH  29  
LMH  C38  C30  C  0  1  N  N  S  127.820  122.787  123.304   -8.072  -3.191  -0.366  C38  LMH  30  
LMH  C40  C31  C  0  1  N  N  R  127.253  124.033  123.856   -6.777  -2.574   0.169  C40  LMH  31  
LMH  O26  O1   O  0  1  N  N  N  129.131  128.458  123.396   -3.470   1.090   0.493  O26  LMH  32  
LMH  O28  O2   O  0  1  N  N  N  127.454  128.538  125.367   -4.507   0.457  -1.719  O28  LMH  33  
LMH  O29  O3   O  0  1  N  N  N  129.396  127.023  125.537   -5.799   2.055  -0.254  O29  LMH  34  
LMH  O30  O4   O  0  1  N  N  N  127.466  126.378  123.919   -5.568  -0.489   0.366  O30  LMH  35  
LMH  O32  O5   O  0  1  N  N  N  128.363  125.350  122.027   -7.901  -0.445   0.372  O32  LMH  36  
LMH  O35  O6   O  0  1  N  N  N  129.171  122.935  119.433  -10.249   1.189   0.086  O35  LMH  37  
LMH  O37  O7   O  0  1  N  N  N  128.688  121.702  121.372  -10.479  -2.953  -0.326  O37  LMH  38  
LMH  O39  O8   O  0  1  N  N  N  126.899  121.680  123.568   -8.142  -4.565   0.018  O39  LMH  39  
LMH  O41  O9   O  0  1  N  N  N  127.173  123.917  125.297   -5.655  -3.226  -0.430  O41  LMH  40  
LMH  P27  P1   P  0  1  N  N  N  128.364  127.607  124.595   -4.829   0.771  -0.309  P27  LMH  41  
LMH  H1   H1   H  0  1  N  N  N  124.580  136.330  135.572    9.766  -6.696   2.422  H1   LMH  42  
LMH  H2   H2   H  0  1  N  N  N  124.605  135.729  133.880   11.354  -6.368   1.687  H2   LMH  43  
LMH  H3   H3   H  0  1  N  N  N  126.041  136.570  134.555   10.781  -5.375   3.048  H3   LMH  44  
LMH  H5   H5   H  0  1  N  N  N  123.324  138.186  135.940    8.040  -6.121   1.158  H5   LMH  45  
LMH  H6   H6   H  0  1  N  N  N  123.926  139.694  135.173    7.785  -4.360   1.102  H6   LMH  46  
LMH  H7   H7   H  0  1  N  N  N  122.488  138.856  134.498    8.363  -5.221  -0.344  H7   LMH  47  
LMH  H8   H8   H  0  1  N  N  N  124.343  139.266  132.428   11.553  -3.827   0.967  H8   LMH  48  
LMH  H10  H10  H  0  1  N  N  N  125.140  136.346  132.050   10.261  -2.946  -1.152  H10  LMH  49  
LMH  H11  H11  H  0  1  N  N  N  126.577  137.244  132.647    8.762  -3.142  -0.213  H11  LMH  50  
LMH  H12  H12  H  0  1  N  N  N  126.545  138.739  130.704    9.585  -1.493   1.446  H12  LMH  51  
LMH  H13  H13  H  0  1  N  N  N  124.950  138.107  130.172   11.084  -1.297   0.507  H13  LMH  52  
LMH  H14  H14  H  0  1  N  N  N  126.794  135.485  131.613   11.084  -0.302  -1.639  H14  LMH  53  
LMH  H15  H15  H  0  1  N  N  N  126.562  134.574  130.082    9.547  -0.231  -2.534  H15  LMH  54  
LMH  H16  H16  H  0  1  N  N  N  128.153  135.323  130.450   10.071   1.158  -1.552  H16  LMH  55  
LMH  H17  H17  H  0  1  N  N  N  126.531  137.803  128.030    7.634  -0.453   0.752  H17  LMH  56  
LMH  H18  H18  H  0  1  N  N  N  127.032  134.818  127.869    7.219   1.774  -0.591  H18  LMH  57  
LMH  H19  H19  H  0  1  N  N  N  128.599  135.674  128.066    8.000   0.981  -1.980  H19  LMH  58  
LMH  H20  H20  H  0  1  N  N  N  126.847  136.957  126.021    6.230  -0.755  -1.985  H20  LMH  59  
LMH  H21  H21  H  0  1  N  N  N  127.246  135.254  125.613    5.449   0.038  -0.596  H21  LMH  60  
LMH  H22  H22  H  0  1  N  N  N  129.435  137.275  127.778    4.918   0.357  -4.373  H22  LMH  61  
LMH  H23  H23  H  0  1  N  N  N  130.846  136.596  126.898    5.455   2.054  -4.345  H23  LMH  62  
LMH  H24  H24  H  0  1  N  N  N  130.218  138.224  126.470    6.629   0.744  -4.075  H24  LMH  63  
LMH  H25  H25  H  0  1  N  N  N  130.388  136.701  124.202    3.867   2.583  -2.633  H25  LMH  64  
LMH  H26  H26  H  0  1  N  N  N  128.204  136.487  122.670    3.301   1.819  -0.173  H26  LMH  65  
LMH  H27  H27  H  0  1  N  N  N  127.509  135.441  123.954    5.047   1.556   0.052  H27  LMH  66  
LMH  H28  H28  H  0  1  N  N  N  128.452  133.643  122.874    5.466   3.961  -0.385  H28  LMH  67  
LMH  H29  H29  H  0  1  N  N  N  130.058  134.284  123.360    3.720   4.224  -0.609  H29  LMH  68  
LMH  H31  H31  H  0  1  N  N  N  129.482  136.950  121.690    5.996   4.556   2.448  H31  LMH  69  
LMH  H32  H32  H  0  1  N  N  N  130.645  136.402  120.435    5.142   3.233   3.279  H32  LMH  70  
LMH  H33  H33  H  0  1  N  N  N  128.890  136.482  120.059    6.175   2.882   1.872  H33  LMH  71  
LMH  H34  H34  H  0  1  N  N  N  129.835  133.908  119.400    3.033   4.318   2.948  H34  LMH  72  
LMH  H36  H36  H  0  1  N  N  N  128.345  132.340  121.490    1.506   5.146   0.995  H36  LMH  73  
LMH  H37  H37  H  0  1  N  N  N  130.060  132.345  122.022    2.207   3.858  -0.013  H37  LMH  74  
LMH  H38  H38  H  0  1  N  N  N  130.774  131.276  119.919    1.281   2.148   1.526  H38  LMH  75  
LMH  H39  H39  H  0  1  N  N  N  129.118  131.413  119.239    0.580   3.436   2.534  H39  LMH  76  
LMH  H40  H40  H  0  1  N  N  N  130.244  129.432  121.191   -0.061   3.006  -0.417  H40  LMH  77  
LMH  H41  H41  H  0  1  N  N  N  128.552  127.998  120.068   -1.318   4.771   1.732  H41  LMH  78  
LMH  H42  H42  H  0  1  N  N  N  127.907  129.435  119.205   -0.304   5.340   0.384  H42  LMH  79  
LMH  H43  H43  H  0  1  N  N  N  129.573  128.858  118.866   -1.893   4.609   0.055  H43  LMH  80  
LMH  H44  H44  H  0  1  N  N  N  127.874  131.084  121.770   -0.871   1.158   1.079  H44  LMH  81  
LMH  H45  H45  H  0  1  N  N  N  127.466  129.339  121.650   -1.732   2.372   2.055  H45  LMH  82  
LMH  H46  H46  H  0  1  N  N  N  129.754  130.423  123.392   -3.028   3.060   0.056  H46  LMH  83  
LMH  H47  H47  H  0  1  N  N  N  128.091  130.132  124.003   -2.167   1.846  -0.920  H47  LMH  84  
LMH  H48  H48  H  0  1  N  N  N  129.074  125.150  124.016   -6.748  -0.963  -1.262  H48  LMH  85  
LMH  H49  H49  H  0  1  N  N  N  129.918  123.942  121.866   -9.174  -0.826  -1.210  H49  LMH  86  
LMH  H50  H50  H  0  1  N  N  N  129.818  124.876  119.687  -11.246  -0.617   0.196  H50  LMH  87  
LMH  H51  H51  H  0  1  N  N  N  128.039  124.652  119.583  -10.216  -0.223   1.593  H51  LMH  88  
LMH  H52  H52  H  0  1  N  N  N  127.064  122.999  121.332   -9.275  -2.553   1.306  H52  LMH  89  
LMH  H53  H53  H  0  1  N  N  N  128.784  122.582  123.793   -8.092  -3.114  -1.453  H53  LMH  90  
LMH  H54  H54  H  0  1  N  N  N  126.245  124.184  123.443   -6.735  -2.696   1.252  H54  LMH  91  
LMH  H55  H55  H  0  1  N  N  N  129.255  127.364  126.413   -6.052   2.319   0.642  H55  LMH  92  
LMH  H56  H56  H  0  1  N  N  N  129.220  122.989  118.486  -10.955   1.740   0.451  H56  LMH  93  
LMH  H57  H57  H  0  1  N  N  N  128.157  120.945  121.591  -10.624  -3.892  -0.143  H57  LMH  94  
LMH  H58  H58  H  0  1  N  N  N  126.753  121.605  124.504   -7.415  -5.106  -0.321  H58  LMH  95  
LMH  H59  H59  H  0  1  N  N  N  126.809  124.716  125.660   -4.799  -2.882  -0.139  H59  LMH  96  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LMH  O35  C34  SING  N  N   1  
LMH  C23  C22  SING  N  N   2  
LMH  C34  C33  SING  N  N   3  
LMH  C21  C22  SING  N  N   4  
LMH  C21  C20  SING  N  N   5  
LMH  C19  C20  SING  N  N   6  
LMH  C19  C17  DOUB  N  Z   7  
LMH  C22  C24  SING  N  N   8  
LMH  C18  C17  SING  N  N   9  
LMH  C17  C16  SING  N  N  10  
LMH  O37  C36  SING  N  N  11  
LMH  C33  C36  SING  N  N  12  
LMH  C33  O32  SING  N  N  13  
LMH  C36  C38  SING  N  N  14  
LMH  C24  C25  SING  N  N  15  
LMH  O32  C31  SING  N  N  16  
LMH  C16  C15  SING  N  N  17  
LMH  C25  O26  SING  N  N  18  
LMH  C38  O39  SING  N  N  19  
LMH  C38  C40  SING  N  N  20  
LMH  O26  P27  SING  N  N  21  
LMH  C15  C14  SING  N  N  22  
LMH  C31  C40  SING  N  N  23  
LMH  C31  O30  SING  N  N  24  
LMH  C40  O41  SING  N  N  25  
LMH  O30  P27  SING  N  N  26  
LMH  C14  C12  DOUB  N  Z  27  
LMH  P27  O28  DOUB  N  N  28  
LMH  P27  O29  SING  N  N  29  
LMH  C12  C11  SING  N  N  30  
LMH  C12  C13  SING  N  N  31  
LMH  C11  C10  SING  N  N  32  
LMH  C10  C09  SING  N  N  33  
LMH  C09  C07  DOUB  N  E  34  
LMH  C07  C08  SING  N  N  35  
LMH  C07  C06  SING  N  N  36  
LMH  C06  C05  SING  N  N  37  
LMH  C05  C04  SING  N  N  38  
LMH  C04  C02  DOUB  N  N  39  
LMH  C02  C01  SING  N  N  40  
LMH  C02  C03  SING  N  N  41  
LMH  C01  H1   SING  N  N  42  
LMH  C01  H2   SING  N  N  43  
LMH  C01  H3   SING  N  N  44  
LMH  C03  H5   SING  N  N  45  
LMH  C03  H6   SING  N  N  46  
LMH  C03  H7   SING  N  N  47  
LMH  C04  H8   SING  N  N  48  
LMH  C05  H10  SING  N  N  49  
LMH  C05  H11  SING  N  N  50  
LMH  C06  H12  SING  N  N  51  
LMH  C06  H13  SING  N  N  52  
LMH  C08  H14  SING  N  N  53  
LMH  C08  H15  SING  N  N  54  
LMH  C08  H16  SING  N  N  55  
LMH  C09  H17  SING  N  N  56  
LMH  C10  H18  SING  N  N  57  
LMH  C10  H19  SING  N  N  58  
LMH  C11  H20  SING  N  N  59  
LMH  C11  H21  SING  N  N  60  
LMH  C13  H22  SING  N  N  61  
LMH  C13  H23  SING  N  N  62  
LMH  C13  H24  SING  N  N  63  
LMH  C14  H25  SING  N  N  64  
LMH  C15  H26  SING  N  N  65  
LMH  C15  H27  SING  N  N  66  
LMH  C16  H28  SING  N  N  67  
LMH  C16  H29  SING  N  N  68  
LMH  C18  H31  SING  N  N  69  
LMH  C18  H32  SING  N  N  70  
LMH  C18  H33  SING  N  N  71  
LMH  C19  H34  SING  N  N  72  
LMH  C20  H36  SING  N  N  73  
LMH  C20  H37  SING  N  N  74  
LMH  C21  H38  SING  N  N  75  
LMH  C21  H39  SING  N  N  76  
LMH  C22  H40  SING  N  N  77  
LMH  C23  H41  SING  N  N  78  
LMH  C23  H42  SING  N  N  79  
LMH  C23  H43  SING  N  N  80  
LMH  C24  H44  SING  N  N  81  
LMH  C24  H45  SING  N  N  82  
LMH  C25  H46  SING  N  N  83  
LMH  C25  H47  SING  N  N  84  
LMH  C31  H48  SING  N  N  85  
LMH  C33  H49  SING  N  N  86  
LMH  C34  H50  SING  N  N  87  
LMH  C34  H51  SING  N  N  88  
LMH  C36  H52  SING  N  N  89  
LMH  C38  H53  SING  N  N  90  
LMH  C40  H54  SING  N  N  91  
LMH  O29  H55  SING  N  N  92  
LMH  O35  H56  SING  N  N  93  
LMH  O37  H57  SING  N  N  94  
LMH  O39  H58  SING  N  N  95  
LMH  O41  H59  SING  N  N  96  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LMH  InChI             InChI                 1.03   "InChI=1S/C31H55O9P/c1-22(2)11-7-12-23(3)13-8-14-24(4)15-9-16-25(5)17-10-18-26(6)19-20-38-41(36,37)40-31-30(35)29(34)28(33)27(21-32)39-31/h11,13,15,17,26-35H,7-10,12,14,16,18-21H2,1-6H3,(H,36,37)/b23-13+,24-15-,25-17-/t26-,27+,28+,29-,30+,31-/m0/s1"  
LMH  InChIKey          InChI                 1.03   AGLXCEGQRIYVRV-HAYNYTLHSA-N  
LMH  SMILES_CANONICAL  CACTVS                3.385  "C[C@H](CCO[P](O)(=O)O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)CC\C=C(C)/CC\C=C(C)/CC\C=C(C)\CCC=C(C)C"  
LMH  SMILES            CACTVS                3.385  "C[CH](CCO[P](O)(=O)O[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C"  
LMH  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H](CC/C=C(/C)\CC/C=C(/C)\CC/C=C(\C)/CCC=C(C)C)CCOP(=O)(O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O"  
LMH  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C)CCOP(=O)(O)OC1C(C(C(C(O1)CO)O)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          LMH
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl] [(3~{S},6~{Z},10~{Z},14~{E})-3,7,11,15,19-pentamethylicosa-6,10,14,18-tetraenyl] hydrogen phosphate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LMH  "Create component"  2019-08-25  EBI   
LMH  "Initial release"   2020-03-11  RCSB  
##
