data_K2H
#

_chem_comp.id                                   K2H
_chem_comp.name                                 "(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[3-(6-azanyl-9~{H}-purin-8-yl)prop-2-ynyl-methyl-amino]methyl]oxolane-3,4-diol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H21 N11 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-04-16
_chem_comp.pdbx_modified_date                   2020-02-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       451.442
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    K2H
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RG7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K2H  C2   C1   C  0  1  Y  N  N  19.935   5.507   8.576   6.554   2.062  -1.743  C2   K2H   1  
K2H  C4   C2   C  0  1  Y  N  N  17.845   6.378   8.245   4.876   1.254  -0.395  C4   K2H   2  
K2H  C5   C3   C  0  1  Y  N  N  17.490   5.257   7.536   5.015   2.380   0.433  C5   K2H   3  
K2H  C6   C4   C  0  1  Y  N  N  18.428   4.256   7.366   5.976   3.344   0.087  C6   K2H   4  
K2H  N9   N1   N  0  1  Y  N  N  16.800   7.179   8.274   3.878   0.495   0.161  N9   K2H   5  
K2H  C8   C5   C  0  1  Y  N  N  15.813   6.596   7.604   3.442   1.147   1.276  C8   K2H   6  
K2H  CAK  C6   C  0  1  N  N  R  16.761   8.479   8.934   3.372  -0.781  -0.350  CAK  K2H   7  
K2H  CAM  C7   C  0  1  N  N  R  15.257   9.914   9.809   1.820  -2.437  -0.002  CAM  K2H   8  
K2H  CAN  C8   C  0  1  N  N  N  13.839  10.123  10.401   0.675  -2.889   0.906  CAN  K2H   9  
K2H  CAP  C9   C  0  1  N  N  N  14.110  10.944  12.730  -1.678  -2.555   1.371  CAP  K2H  10  
K2H  CAQ  C10  C  0  1  N  N  N  15.555  11.194  12.678  -2.866  -1.795   0.950  CAQ  K2H  11  
K2H  CAR  C11  C  0  1  N  N  N  16.749  11.391  12.635  -3.814  -1.189   0.615  CAR  K2H  12  
K2H  CAS  C12  C  0  1  Y  N  N  18.155  11.600  12.596  -4.970  -0.449   0.205  CAS  K2H  13  
K2H  CAU  C13  C  0  1  Y  N  N  20.250  11.301  12.919  -6.681   0.273  -0.994  CAU  K2H  14  
K2H  CAW  C14  C  0  1  Y  N  N  22.519  11.610  12.857  -8.533   1.503  -1.579  CAW  K2H  15  
K2H  CAY  C15  C  0  1  Y  N  N  21.192  13.164  11.796  -7.582   1.964   0.473  CAY  K2H  16  
K2H  CAZ  C16  C  0  1  Y  N  N  20.075  12.448  12.181  -6.614   0.974   0.223  CAZ  K2H  17  
K2H  CBC  C17  C  0  1  N  N  N  14.473   8.593  12.215  -0.934  -2.923  -0.904  CBC  K2H  18  
K2H  CBD  C18  C  0  1  N  N  S  15.293  10.263   8.323   3.152  -3.069   0.457  CBD  K2H  19  
K2H  CBF  C19  C  0  1  N  N  R  16.551   9.537   7.861   4.197  -1.955   0.223  CBF  K2H  20  
K2H  N1   N2   N  0  1  Y  N  N  19.637   4.422   7.899   6.717   3.139  -0.997  N1   K2H  21  
K2H  N3   N3   N  0  1  Y  N  N  19.068   6.479   8.749   5.660   1.137  -1.463  N3   K2H  22  
K2H  N6   N4   N  0  1  N  N  N  18.149   3.152   6.690   6.158   4.474   0.865  N6   K2H  23  
K2H  N7   N5   N  0  1  Y  N  N  16.235   5.421   7.154   4.110   2.253   1.434  N7   K2H  24  
K2H  NAO  N6   N  0  1  N  N  N  13.729   9.808  11.849  -0.594  -2.344   0.403  NAO  K2H  25  
K2H  NAT  N7   N  0  1  Y  N  N  19.052  10.802  13.155  -5.638  -0.618  -0.982  NAT  K2H  26  
K2H  NAV  N8   N  0  1  Y  N  N  21.479  10.904  13.239  -7.650   0.568  -1.856  NAV  K2H  27  
K2H  NAX  N9   N  0  1  Y  N  N  22.394  12.714  12.152  -8.509   2.190  -0.451  NAX  K2H  28  
K2H  NBA  N10  N  0  1  Y  N  N  18.775  12.609  12.000  -5.556   0.490   0.910  NBA  K2H  29  
K2H  NBB  N11  N  0  1  N  N  N  21.077  14.274  11.090  -7.565   2.689   1.652  NBB  K2H  30  
K2H  OAL  O1   O  0  1  N  N  N  15.605   8.542   9.762   2.026  -1.013   0.119  OAL  K2H  31  
K2H  OBE  O2   O  0  1  N  N  N  15.439  11.663   8.130   3.459  -4.220  -0.332  OBE  K2H  32  
K2H  OBG  O3   O  0  1  N  N  N  17.665  10.418   7.874   5.182  -2.382  -0.719  OBG  K2H  33  
K2H  H1   H1   H  0  1  N  N  N  20.922   5.603   9.003   7.174   1.936  -2.618  H1   K2H  34  
K2H  H2   H2   H  0  1  N  N  N  14.828   7.010   7.450   2.658   0.798   1.931  H2   K2H  35  
K2H  H3   H3   H  0  1  N  N  N  17.686   8.675   9.497   3.401  -0.792  -1.439  H3   K2H  36  
K2H  H4   H4   H  0  1  N  N  N  15.994  10.512  10.365   1.610  -2.705  -1.038  H4   K2H  37  
K2H  H5   H5   H  0  1  N  N  N  13.556  11.176  10.255   0.625  -3.978   0.913  H5   K2H  38  
K2H  H6   H6   H  0  1  N  N  N  13.138   9.476   9.853   0.850  -2.527   1.919  H6   K2H  39  
K2H  H7   H7   H  0  1  N  N  N  13.577  11.848  12.400  -1.358  -2.214   2.355  H7   K2H  40  
K2H  H8   H8   H  0  1  N  N  N  13.824  10.707  13.765  -1.923  -3.616   1.417  H8   K2H  41  
K2H  H9   H9   H  0  1  N  N  N  23.508  11.274  13.130  -9.307   1.717  -2.301  H9   K2H  42  
K2H  H10  H10  H  0  1  N  N  N  14.360   8.404  13.293  -1.032  -4.004  -0.808  H10  K2H  43  
K2H  H11  H11  H  0  1  N  N  N  14.077   7.737  11.649  -1.877  -2.502  -1.253  H11  K2H  44  
K2H  H12  H12  H  0  1  N  N  N  15.538   8.730  11.976  -0.146  -2.692  -1.620  H12  K2H  45  
K2H  H13  H13  H  0  1  N  N  N  14.405   9.864   7.811   3.105  -3.333   1.514  H13  K2H  46  
K2H  H14  H14  H  0  1  N  N  N  16.395   9.072   6.877   4.668  -1.667   1.163  H14  K2H  47  
K2H  H15  H15  H  0  1  N  N  N  18.952   2.556   6.678   5.618   4.608   1.660  H15  K2H  48  
K2H  H16  H16  H  0  1  N  N  N  17.387   2.676   7.129   6.825   5.133   0.616  H16  K2H  49  
K2H  H18  H18  H  0  1  N  N  N  18.855   9.966  13.667  -5.414  -1.250  -1.683  H18  K2H  50  
K2H  H20  H20  H  0  1  N  N  N  21.986  14.650  10.908  -8.236   3.372   1.811  H20  K2H  51  
K2H  H21  H21  H  0  1  N  N  N  20.621  14.072  10.223  -6.883   2.515   2.319  H21  K2H  52  
K2H  H22  H22  H  0  1  N  N  N  14.651  12.107   8.420   4.286  -4.657  -0.086  H22  K2H  53  
K2H  H23  H23  H  0  1  N  N  N  18.441   9.953   7.584   5.689  -3.155  -0.435  H23  K2H  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K2H  N6   C6   SING  N  N   1  
K2H  N7   C5   SING  Y  N   2  
K2H  N7   C8   DOUB  Y  N   3  
K2H  C6   C5   DOUB  Y  N   4  
K2H  C6   N1   SING  Y  N   5  
K2H  C5   C4   SING  Y  N   6  
K2H  C8   N9   SING  Y  N   7  
K2H  CBF  OBG  SING  N  N   8  
K2H  CBF  CBD  SING  N  N   9  
K2H  CBF  CAK  SING  N  N  10  
K2H  N1   C2   DOUB  Y  N  11  
K2H  OBE  CBD  SING  N  N  12  
K2H  C4   N9   SING  Y  N  13  
K2H  C4   N3   DOUB  Y  N  14  
K2H  N9   CAK  SING  N  N  15  
K2H  CBD  CAM  SING  N  N  16  
K2H  C2   N3   SING  Y  N  17  
K2H  CAK  OAL  SING  N  N  18  
K2H  OAL  CAM  SING  N  N  19  
K2H  CAM  CAN  SING  N  N  20  
K2H  CAN  NAO  SING  N  N  21  
K2H  NBB  CAY  SING  N  N  22  
K2H  CAY  NAX  DOUB  Y  N  23  
K2H  CAY  CAZ  SING  Y  N  24  
K2H  NAO  CBC  SING  N  N  25  
K2H  NAO  CAP  SING  N  N  26  
K2H  NBA  CAZ  SING  Y  N  27  
K2H  NBA  CAS  DOUB  Y  N  28  
K2H  NAX  CAW  SING  Y  N  29  
K2H  CAZ  CAU  DOUB  Y  N  30  
K2H  CAS  CAR  SING  N  N  31  
K2H  CAS  NAT  SING  Y  N  32  
K2H  CAR  CAQ  TRIP  N  N  33  
K2H  CAQ  CAP  SING  N  N  34  
K2H  CAW  NAV  DOUB  Y  N  35  
K2H  CAU  NAT  SING  Y  N  36  
K2H  CAU  NAV  SING  Y  N  37  
K2H  C2   H1   SING  N  N  38  
K2H  C8   H2   SING  N  N  39  
K2H  CAK  H3   SING  N  N  40  
K2H  CAM  H4   SING  N  N  41  
K2H  CAN  H5   SING  N  N  42  
K2H  CAN  H6   SING  N  N  43  
K2H  CAP  H7   SING  N  N  44  
K2H  CAP  H8   SING  N  N  45  
K2H  CAW  H9   SING  N  N  46  
K2H  CBC  H10  SING  N  N  47  
K2H  CBC  H11  SING  N  N  48  
K2H  CBC  H12  SING  N  N  49  
K2H  CBD  H13  SING  N  N  50  
K2H  CBF  H14  SING  N  N  51  
K2H  N6   H15  SING  N  N  52  
K2H  N6   H16  SING  N  N  53  
K2H  NAT  H18  SING  N  N  54  
K2H  NBB  H20  SING  N  N  55  
K2H  NBB  H21  SING  N  N  56  
K2H  OBE  H22  SING  N  N  57  
K2H  OBG  H23  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K2H  InChI             InChI                 1.03   "InChI=1S/C19H21N11O3/c1-29(4-2-3-10-27-11-15(20)22-6-24-17(11)28-10)5-9-13(31)14(32)19(33-9)30-8-26-12-16(21)23-7-25-18(12)30/h6-9,13-14,19,31-32H,4-5H2,1H3,(H2,21,23,25)(H3,20,22,24,27,28)/t9-,13-,14-,19-/m1/s1"  
K2H  InChIKey          InChI                 1.03   MNFDLXSVTTXDGC-NBKUUXFISA-N  
K2H  SMILES_CANONICAL  CACTVS                3.385  "CN(CC#Cc1[nH]c2ncnc(N)c2n1)C[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45"  
K2H  SMILES            CACTVS                3.385  "CN(CC#Cc1[nH]c2ncnc(N)c2n1)C[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45"  
K2H  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN(CC#Cc1[nH]c2c(n1)c(ncn2)N)C[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O"  
K2H  SMILES            "OpenEye OEToolkits"  2.0.7  "CN(CC#Cc1[nH]c2c(n1)c(ncn2)N)CC3C(C(C(O3)n4cnc5c4ncnc5N)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          K2H
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[3-(6-azanyl-9~{H}-purin-8-yl)prop-2-ynyl-methyl-amino]methyl]oxolane-3,4-diol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K2H  "Create component"  2019-04-16  RCSB  
K2H  "Initial release"   2020-02-19  RCSB  
##
