data_GFH
# 
_chem_comp.id                                    GFH 
_chem_comp.name                                  "2'-DEOXY-5'-O-[(R)-{[(R)-[(R)-FLUORO(PHOSPHONO)METHYL](HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H17 F N5 O12 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2007-06-01 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        523.199 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GFH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        "Corina V3.40" 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GFH PA     PA     P 0 1 N N R 5.056  5.076  14.616 2.026  -1.562 -0.731 PA     GFH 1  
GFH O1A    O1A    O 0 1 N N N 3.947  5.107  15.594 1.855  -1.355 -2.318 O1A    GFH 2  
GFH O2A    O2A    O 0 1 N N N 6.444  5.224  15.111 2.616  -2.894 -0.468 O2A    GFH 3  
GFH O3A    O3A    O 0 1 N N N 4.961  3.809  13.776 2.996  -0.420 -0.142 O3A    GFH 4  
GFH "O5'"  "O5'"  O 0 1 N N N 4.780  6.283  13.608 0.586  -1.462 -0.018 "O5'"  GFH 5  
GFH PB     PB     P 0 1 N N R 3.859  2.784  13.622 4.586  -0.169 -0.190 PB     GFH 6  
GFH O1B    O1B    O 0 1 N N N 3.826  2.305  12.218 5.023  -0.039 -1.598 O1B    GFH 7  
GFH O2B    O2B    O 0 1 N N N 2.601  3.219  14.265 5.346  -1.411 0.496  O2B    GFH 8  
GFH C3B    C3B    C 0 1 N N R 4.557  1.349  14.560 4.987  1.362  0.715  C3B    GFH 9  
GFH F3B    F3B    F 0 1 N N N 4.315  0.118  13.935 4.326  2.442  0.119  F3B    GFH 10 
GFH PG     PG     P 0 1 N N N 4.065  1.253  16.331 6.787  1.647  0.661  PG     GFH 11 
GFH O1G    O1G    O 0 1 N N N 3.809  2.659  16.756 7.262  1.788  -0.871 O1G    GFH 12 
GFH O2G    O2G    O 0 1 N N N 5.090  0.443  17.055 7.141  2.999  1.460  O2G    GFH 13 
GFH O3G    O3G    O 0 1 N N N 2.781  0.507  16.332 7.485  0.504  1.291  O3G    GFH 14 
GFH "C5'"  "C5'"  C 0 1 N N N 3.524  6.399  12.941 -0.463 -2.405 -0.249 "C5'"  GFH 15 
GFH "C4'"  "C4'"  C 0 1 N N R 3.713  6.592  11.456 -1.688 -2.017 0.581  "C4'"  GFH 16 
GFH "O4'"  "O4'"  O 0 1 N N N 4.568  7.723  11.187 -2.284 -0.807 0.064  "O4'"  GFH 17 
GFH "C1'"  "C1'"  C 0 1 N N R 5.281  7.499  9.972  -3.641 -0.809 0.559  "C1'"  GFH 18 
GFH N9     N9     N 0 1 Y N N 6.709  7.651  10.238 -4.483 0.066  -0.259 N9     GFH 19 
GFH C4     C4     C 0 1 Y N N 7.651  8.128  9.356  -5.651 0.663  0.133  C4     GFH 20 
GFH N3     N3     N 0 1 N N N 7.410  8.569  8.107  -6.362 0.667  1.267  N3     GFH 21 
GFH C2     C2     C 0 1 N N N 8.511  8.966  7.500  -7.480 1.351  1.365  C2     GFH 22 
GFH N2     N2     N 0 1 N N N 8.433  9.479  6.257  -8.175 1.324  2.548  N2     GFH 23 
GFH N1     N1     N 0 1 N N N 9.766  8.902  8.071  -7.968 2.087  0.327  N1     GFH 24 
GFH C6     C6     C 0 1 N N N 10.036 8.431  9.354  -7.305 2.131  -0.850 C6     GFH 25 
GFH O6     O6     O 0 1 N N N 11.201 8.382  9.762  -7.733 2.786  -1.784 O6     GFH 26 
GFH C5     C5     C 0 1 Y N N 8.856  8.040  10.023 -6.100 1.400  -0.969 C5     GFH 27 
GFH N7     N7     N 0 1 Y N N 8.675  7.545  11.305 -5.200 1.220  -1.966 N7     GFH 28 
GFH C8     C8     C 0 1 Y N N 7.389  7.328  11.390 -4.245 0.441  -1.549 C8     GFH 29 
GFH "C2'"  "C2'"  C 0 1 N N N 4.897  6.100  9.482  -4.106 -2.277 0.430  "C2'"  GFH 30 
GFH "C3'"  "C3'"  C 0 1 N N S 4.380  5.428  10.739 -2.792 -3.090 0.445  "C3'"  GFH 31 
GFH "O3'"  "O3'"  O 0 1 N N N 3.413  4.412  10.439 -2.766 -3.980 1.563  "O3'"  GFH 32 
GFH HO1A   HO1A   H 0 0 N N N 4.302  5.114  16.475 1.473  -0.501 -2.565 HO1A   GFH 33 
GFH HO2B   HO2B   H 0 0 N N N 2.739  3.312  15.200 5.108  -1.556 1.422  HO2B   GFH 34 
GFH H3B    H3B    H 0 1 N N N 5.638  1.554  14.547 4.665  1.267  1.752  H3B    GFH 35 
GFH HO1G   HO1G   H 0 0 N N N 3.755  2.699  17.704 6.844  2.518  -1.347 HO1G   GFH 36 
GFH HO2G   HO2G   H 0 0 N N N 5.824  0.271  16.477 8.083  3.213  1.472  HO2G   GFH 37 
GFH "H5'1" "1H5'" H 0 0 N N N 2.944  5.480  13.110 -0.726 -2.404 -1.307 "H5'1" GFH 38 
GFH "H5'2" "2H5'" H 0 0 N N N 2.993  7.275  13.343 -0.128 -3.400 0.041  "H5'2" GFH 39 
GFH "H4'"  "H4'"  H 0 1 N N N 2.685  6.716  11.086 -1.412 -1.889 1.628  "H4'"  GFH 40 
GFH "H1'"  "H1'"  H 0 1 N N N 5.030  8.221  9.182  -3.665 -0.494 1.602  "H1'"  GFH 41 
GFH HN21   1HN2   H 0 0 N N N 8.414  10.477 6.309  -7.840 0.806  3.296  HN21   GFH 42 
GFH HN22   2HN2   H 0 0 N N N 9.229  9.188  5.726  -9.002 1.824  2.636  HN22   GFH 43 
GFH HN1    HN1    H 0 1 N N N 10.540 9.218  7.522  -8.796 2.580  0.433  HN1    GFH 44 
GFH H8     H8     H 0 1 N N N 6.909  6.935  12.274 -3.392 0.134  -2.137 H8     GFH 45 
GFH "H2'1" "1H2'" H 0 0 N N N 4.127  6.141  8.697  -4.736 -2.554 1.275  "H2'1" GFH 46 
GFH "H2'2" "2H2'" H 0 0 N N N 5.736  5.560  9.019  -4.637 -2.428 -0.510 "H2'2" GFH 47 
GFH "H3'"  "H3'"  H 0 1 N N N 5.166  4.919  11.316 -2.674 -3.642 -0.487 "H3'"  GFH 48 
GFH "HO3'" "HO3'" H 0 0 N N N 3.199  4.441  9.514  -3.439 -4.674 1.528  "HO3'" GFH 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GFH PA    "O5'"  SING N N 1  
GFH PA    O3A    SING N N 2  
GFH PA    O2A    DOUB N N 3  
GFH PA    O1A    SING N N 4  
GFH O1A   HO1A   SING N N 5  
GFH O3A   PB     SING N N 6  
GFH "O5'" "C5'"  SING N N 7  
GFH PB    O1B    DOUB N N 8  
GFH PB    O2B    SING N N 9  
GFH PB    C3B    SING N N 10 
GFH O2B   HO2B   SING N N 11 
GFH C3B   F3B    SING N N 12 
GFH C3B   PG     SING N N 13 
GFH C3B   H3B    SING N N 14 
GFH PG    O3G    DOUB N N 15 
GFH PG    O1G    SING N N 16 
GFH PG    O2G    SING N N 17 
GFH O1G   HO1G   SING N N 18 
GFH O2G   HO2G   SING N N 19 
GFH "C5'" "C4'"  SING N N 20 
GFH "C5'" "H5'1" SING N N 21 
GFH "C5'" "H5'2" SING N N 22 
GFH "C4'" "C3'"  SING N N 23 
GFH "C4'" "O4'"  SING N N 24 
GFH "C4'" "H4'"  SING N N 25 
GFH "O4'" "C1'"  SING N N 26 
GFH "C1'" "C2'"  SING N N 27 
GFH "C1'" N9     SING N N 28 
GFH "C1'" "H1'"  SING N N 29 
GFH N9    C4     SING Y N 30 
GFH N9    C8     SING Y N 31 
GFH C4    N3     SING N N 32 
GFH C4    C5     DOUB Y N 33 
GFH N3    C2     DOUB N N 34 
GFH C2    N2     SING N N 35 
GFH C2    N1     SING N N 36 
GFH N2    HN21   SING N N 37 
GFH N2    HN22   SING N N 38 
GFH N1    C6     SING N N 39 
GFH N1    HN1    SING N N 40 
GFH C6    O6     DOUB N N 41 
GFH C6    C5     SING N N 42 
GFH C5    N7     SING Y N 43 
GFH N7    C8     DOUB Y N 44 
GFH C8    H8     SING N N 45 
GFH "C2'" "C3'"  SING N N 46 
GFH "C2'" "H2'1" SING N N 47 
GFH "C2'" "H2'2" SING N N 48 
GFH "C3'" "O3'"  SING N N 49 
GFH "C3'" "H3'"  SING N N 50 
GFH "O3'" "HO3'" SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GFH SMILES           ACDLabs              10.04 "FC(P(=O)(O)O)P(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)CC3O" 
GFH SMILES_CANONICAL CACTVS               3.341 "NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P@](O)(=O)O[P@@](O)(=O)[C@H](F)[P](O)(O)=O)O3" 
GFH SMILES           CACTVS               3.341 "NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)[CH](F)[P](O)(O)=O)O3" 
GFH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@@](=O)([C@H](F)P(=O)(O)O)O)O)N=C(NC2=O)N" 
GFH SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3CC(C(O3)COP(=O)(O)OP(=O)(C(F)P(=O)(O)O)O)O)N=C(NC2=O)N" 
GFH InChI            InChI                1.03  
"InChI=1S/C11H17FN5O12P3/c12-10(30(20,21)22)31(23,24)29-32(25,26)27-2-5-4(18)1-6(28-5)17-3-14-7-8(17)15-11(13)16-9(7)19/h3-6,10,18H,1-2H2,(H,23,24)(H,25,26)(H2,20,21,22)(H3,13,15,16,19)/t4-,5+,6+,10+/m0/s1" 
GFH InChIKey         InChI                1.03  PVDLZOAYDIZEDJ-AVAJSQPUSA-N 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GFH "SYSTEMATIC NAME" ACDLabs              10.04 "2'-deoxy-5'-O-[(R)-{[(R)-[(R)-fluoro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine"                                               
GFH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(R)-[[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]-fluoro-methyl]phosphonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GFH "Create component"  2007-06-01 RCSB 
GFH "Modify descriptor" 2011-06-04 RCSB 
# 
