data_YOG
#

_chem_comp.id                                   YOG
_chem_comp.name                                 "1,3-dihydroxypropan-2-yl (9Z)-octadec-9-enoate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H40 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-08-27
_chem_comp.pdbx_modified_date                   2021-03-05
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       356.540
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YOG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7JWR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YOG  O01   O1   O  0  1  N  N  N  11.379  6.664   -4.821   -6.998  -0.770  -0.412  O01   YOG   1  
YOG  O02   O2   O  0  1  N  N  N  12.016  4.608   -5.184   -6.239   1.112   0.462  O02   YOG   2  
YOG  O03   O3   O  0  1  N  N  N   9.475  8.348   -4.252   -9.326  -2.421  -0.846  O03   YOG   3  
YOG  O04   O4   O  0  1  N  N  N   7.837  6.293   -5.109   -8.555  -2.380   1.409  O04   YOG   4  
YOG  C05   C1   C  0  1  N  N  N  16.663  6.435   -6.150   -1.302   1.723  -0.139  C05   YOG   5  
YOG  C06   C2   C  0  1  N  N  N  18.047  6.147   -5.647    0.128   1.405  -0.580  C06   YOG   6  
YOG  C07   C3   C  0  1  N  N  N  20.408  7.814  -10.583    8.233  -0.182   0.042  C07   YOG   7  
YOG  C08   C4   C  0  1  N  N  N  20.776  6.871   -9.497    6.785  -0.001   0.501  C08   YOG   8  
YOG  C09   C5   C  0  1  N  N  N  15.609  5.624   -5.468   -2.234   0.590  -0.575  C09   YOG   9  
YOG  C10   C6   C  0  1  N  N  N  18.925  7.828  -10.842    8.658  -1.636   0.258  C10   YOG  10  
YOG  C11   C7   C  0  1  N  N  N  18.694  4.864   -6.193    1.060   2.537  -0.143  C11   YOG  11  
YOG  C12   C8   C  0  1  N  N  N  21.546  5.655   -9.987    6.359   1.452   0.285  C12   YOG  12  
YOG  C13   C9   C  0  1  N  N  N  14.441  5.367   -6.353   -3.664   0.908  -0.134  C13   YOG  13  
YOG  C14   C10  C  0  1  N  N  N  18.164  8.807   -9.990   10.107  -1.817  -0.200  C14   YOG  14  
YOG  C15   C11  C  0  1  N  N  N  20.185  5.058   -6.504    2.490   2.220  -0.585  C15   YOG  15  
YOG  C16   C12  C  0  1  N  N  N  22.338  5.032   -8.870    4.911   1.633   0.743  C16   YOG  16  
YOG  C17   C13  C  0  1  N  N  N  16.795  9.127  -10.573   10.533  -3.270   0.016  C17   YOG  17  
YOG  C18   C14  C  0  1  N  N  N  13.379  6.363   -6.147   -4.595  -0.224  -0.570  C18   YOG  18  
YOG  C19   C15  C  0  1  N  N  N  20.814  3.903   -7.179    3.408   3.335  -0.155  C19   YOG  19  
YOG  C20   C16  C  0  1  N  N  N  21.703  3.891   -8.182    4.491   3.065   0.530  C20   YOG  20  
YOG  C21   C17  C  0  1  N  N  N  15.941  7.899  -10.813   11.981  -3.451  -0.443  C21   YOG  21  
YOG  C22   C18  C  0  1  N  N  N  12.225  5.791   -5.358   -6.004   0.089  -0.136  C22   YOG  22  
YOG  C23   C19  C  0  1  N  N  N  10.108  6.165   -4.407   -8.330  -0.404   0.037  C23   YOG  23  
YOG  C24   C20  C  0  1  N  N  N   9.545  7.177   -3.486   -9.370  -0.994  -0.917  C24   YOG  24  
YOG  C25   C21  C  0  1  N  N  N   9.155  6.064   -5.606   -8.561  -0.951   1.446  C25   YOG  25  
YOG  H031  H1   H  0  0  N  N  N   9.119  9.052   -3.723   -9.961  -2.863  -1.426  H031  YOG  26  
YOG  H041  H2   H  0  0  N  N  N   7.214  6.239   -5.824   -8.696  -2.796   2.270  H041  YOG  27  
YOG  H052  H3   H  0  0  N  N  N  16.446  7.501   -5.985   -1.334   1.822   0.946  H052  YOG  28  
YOG  H051  H4   H  0  0  N  N  N  16.630  6.216   -7.228   -1.625   2.657  -0.599  H051  YOG  29  
YOG  H062  H5   H  0  0  N  N  N  17.999  6.063   -4.551    0.451   0.471  -0.120  H062  YOG  30  
YOG  H061  H6   H  0  0  N  N  N  18.691  6.995   -5.922    0.160   1.306  -1.665  H061  YOG  31  
YOG  H071  H7   H  0  0  N  N  N  20.926  7.513  -11.505    8.313   0.066  -1.016  H071  YOG  32  
YOG  H072  H8   H  0  0  N  N  N  20.728  8.827  -10.297    8.882   0.476   0.620  H072  YOG  33  
YOG  H082  H9   H  0  0  N  N  N  21.399  7.407   -8.766    6.136  -0.660  -0.077  H082  YOG  34  
YOG  H081  H10  H  0  0  N  N  N  19.853  6.525   -9.008    6.705  -0.250   1.559  H081  YOG  35  
YOG  H092  H11  H  0  0  N  N  N  15.265  6.168   -4.576   -2.201   0.491  -1.660  H092  YOG  36  
YOG  H091  H12  H  0  0  N  N  N  16.044  4.660   -5.165   -1.911  -0.344  -0.115  H091  YOG  37  
YOG  H102  H13  H  0  0  N  N  N  18.761  8.088  -11.898    8.579  -1.884   1.317  H102  YOG  38  
YOG  H101  H14  H  0  0  N  N  N  18.530  6.820  -10.647    8.010  -2.294  -0.319  H101  YOG  39  
YOG  H111  H15  H  0  0  N  N  N  18.174  4.570   -7.117    0.737   3.471  -0.603  H111  YOG  40  
YOG  H112  H16  H  0  0  N  N  N  18.589  4.066   -5.443    1.028   2.637   0.942  H112  YOG  41  
YOG  H122  H17  H  0  0  N  N  N  20.835  4.914  -10.381    7.008   2.111   0.862  H122  YOG  42  
YOG  H121  H18  H  0  0  N  N  N  22.235  5.964  -10.787    6.439   1.701  -0.774  H121  YOG  43  
YOG  H132  H19  H  0  0  N  N  N  14.040  4.366   -6.134   -3.696   1.007   0.951  H132  YOG  44  
YOG  H131  H20  H  0  0  N  N  N  14.771  5.408   -7.401   -3.987   1.842  -0.594  H131  YOG  45  
YOG  H141  H21  H  0  0  N  N  N  18.031  8.376   -8.987   10.187  -1.569  -1.259  H141  YOG  46  
YOG  H142  H22  H  0  0  N  N  N  18.744  9.738   -9.915   10.756  -1.158   0.377  H142  YOG  47  
YOG  H152  H23  H  0  0  N  N  N  20.715  5.236   -5.557    2.813   1.286  -0.125  H152  YOG  48  
YOG  H151  H24  H  0  0  N  N  N  20.291  5.939   -7.155    2.522   2.121  -1.669  H151  YOG  49  
YOG  H162  H25  H  0  0  N  N  N  23.293  4.682   -9.289    4.262   0.975   0.166  H162  YOG  50  
YOG  H161  H26  H  0  0  N  N  N  22.531  5.812   -8.119    4.831   1.385   1.802  H161  YOG  51  
YOG  H171  H27  H  0  0  N  N  N  16.937  9.646  -11.533   10.453  -3.519   1.074  H171  YOG  52  
YOG  H172  H28  H  0  0  N  N  N  16.264  9.789   -9.873    9.884  -3.929  -0.562  H172  YOG  53  
YOG  H182  H29  H  0  0  N  N  N  13.796  7.221   -5.599   -4.563  -0.324  -1.655  H182  YOG  54  
YOG  H181  H30  H  0  0  N  N  N  13.010  6.699   -7.127   -4.272  -1.158  -0.110  H181  YOG  55  
YOG  H191  H31  H  0  0  N  N  N  20.515  2.932   -6.812    3.173   4.357  -0.412  H191  YOG  56  
YOG  H201  H32  H  0  0  N  N  N  21.994  2.913   -8.535    5.084   3.868   0.943  H201  YOG  57  
YOG  H211  H33  H  0  0  N  N  N  14.971  8.203  -11.233   12.061  -3.203  -1.501  H211  YOG  58  
YOG  H212  H34  H  0  0  N  N  N  16.453  7.229  -11.520   12.630  -2.793   0.135  H212  YOG  59  
YOG  H213  H35  H  0  0  N  N  N  15.780  7.373   -9.861   12.284  -4.487  -0.289  H213  YOG  60  
YOG  H231  H36  H  0  0  N  N  N  10.196  5.188   -3.910   -8.423   0.682   0.049  H231  YOG  61  
YOG  H242  H37  H  0  0  N  N  N   8.544  6.876   -3.143   -9.151  -0.674  -1.936  H242  YOG  62  
YOG  H241  H38  H  0  0  N  N  N  10.203  7.320   -2.616  -10.363  -0.646  -0.633  H241  YOG  63  
YOG  H251  H39  H  0  0  N  N  N   9.220  5.063   -6.058   -9.525  -0.602   1.818  H251  YOG  64  
YOG  H252  H40  H  0  0  N  N  N   9.413  6.824   -6.359   -7.768  -0.601   2.107  H252  YOG  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YOG  C10  C07   SING  N  N   1  
YOG  C10  C14   SING  N  N   2  
YOG  C21  C17   SING  N  N   3  
YOG  C07  C08   SING  N  N   4  
YOG  C17  C14   SING  N  N   5  
YOG  C12  C08   SING  N  N   6  
YOG  C12  C16   SING  N  N   7  
YOG  C16  C20   SING  N  N   8  
YOG  C20  C19   DOUB  N  Z   9  
YOG  C19  C15   SING  N  N  10  
YOG  C15  C11   SING  N  N  11  
YOG  C13  C18   SING  N  N  12  
YOG  C13  C09   SING  N  N  13  
YOG  C11  C06   SING  N  N  14  
YOG  C05  C06   SING  N  N  15  
YOG  C05  C09   SING  N  N  16  
YOG  C18  C22   SING  N  N  17  
YOG  C25  O04   SING  N  N  18  
YOG  C25  C23   SING  N  N  19  
YOG  C22  O02   DOUB  N  N  20  
YOG  C22  O01   SING  N  N  21  
YOG  O01  C23   SING  N  N  22  
YOG  C23  C24   SING  N  N  23  
YOG  O03  C24   SING  N  N  24  
YOG  O03  H031  SING  N  N  25  
YOG  O04  H041  SING  N  N  26  
YOG  C05  H052  SING  N  N  27  
YOG  C05  H051  SING  N  N  28  
YOG  C06  H062  SING  N  N  29  
YOG  C06  H061  SING  N  N  30  
YOG  C07  H071  SING  N  N  31  
YOG  C07  H072  SING  N  N  32  
YOG  C08  H082  SING  N  N  33  
YOG  C08  H081  SING  N  N  34  
YOG  C09  H092  SING  N  N  35  
YOG  C09  H091  SING  N  N  36  
YOG  C10  H102  SING  N  N  37  
YOG  C10  H101  SING  N  N  38  
YOG  C11  H111  SING  N  N  39  
YOG  C11  H112  SING  N  N  40  
YOG  C12  H122  SING  N  N  41  
YOG  C12  H121  SING  N  N  42  
YOG  C13  H132  SING  N  N  43  
YOG  C13  H131  SING  N  N  44  
YOG  C14  H141  SING  N  N  45  
YOG  C14  H142  SING  N  N  46  
YOG  C15  H152  SING  N  N  47  
YOG  C15  H151  SING  N  N  48  
YOG  C16  H162  SING  N  N  49  
YOG  C16  H161  SING  N  N  50  
YOG  C17  H171  SING  N  N  51  
YOG  C17  H172  SING  N  N  52  
YOG  C18  H182  SING  N  N  53  
YOG  C18  H181  SING  N  N  54  
YOG  C19  H191  SING  N  N  55  
YOG  C20  H201  SING  N  N  56  
YOG  C21  H211  SING  N  N  57  
YOG  C21  H212  SING  N  N  58  
YOG  C21  H213  SING  N  N  59  
YOG  C23  H231  SING  N  N  60  
YOG  C24  H242  SING  N  N  61  
YOG  C24  H241  SING  N  N  62  
YOG  C25  H251  SING  N  N  63  
YOG  C25  H252  SING  N  N  64  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YOG  SMILES            ACDLabs               12.01  "O(C(CO)CO)C(=O)CCCCCCC[C@H]=CCCCCCCCC"  
YOG  InChI             InChI                 1.03   "InChI=1S/C21H40O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(24)25-20(18-22)19-23/h9-10,20,22-23H,2-8,11-19H2,1H3/b10-9-"  
YOG  InChIKey          InChI                 1.03   UPWGQKDVAURUGE-KTKRTIGZSA-N  
YOG  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCCC\C=C/CCCCCCCC(=O)OC(CO)CO"  
YOG  SMILES            CACTVS                3.385  "CCCCCCCCC=CCCCCCCCC(=O)OC(CO)CO"  
YOG  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCCCCCC/C=C\CCCCCCCC(=O)OC(CO)CO"  
YOG  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCCCCCC=CCCCCCCCC(=O)OC(CO)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YOG  "SYSTEMATIC NAME"  ACDLabs               12.01  "1,3-dihydroxypropan-2-yl (9Z)-octadec-9-enoate"  
YOG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "1,3-bis(oxidanyl)propan-2-yl (~{Z})-octadec-9-enoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YOG  "Create component"  2020-08-27  RCSB  
YOG  "Initial release"   2021-03-10  RCSB  
##
