data_XTG
#

_chem_comp.id                                   XTG
_chem_comp.name                                 "4-NITROPHENYL 6-THIO-6-S-ALPHA-D-XYLOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H23 N O11 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4-NITROPHENYL-(6-S-ALPHA-D-XYLOPYRANOSYL)-BETA-D-GLUCOPYRANOSIDE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2005-11-17
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       449.430
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XTG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2F2H
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XTG  C14   C14   C   0  1  Y  N  N  141.386  60.115  132.666  -2.968   2.858  -1.182  C14   XTG   1  
XTG  C13   C13   C   0  1  Y  N  N  141.337  58.728  132.666  -2.192   3.937  -0.805  C13   XTG   2  
XTG  C12   C12   C   0  1  Y  N  N  142.467  57.986  132.327  -1.217   3.784   0.164  C12   XTG   3  
XTG  N1    N1    N   1  1  N  N  N  142.446  56.630  132.306  -0.386   4.941   0.566  N1    XTG   4  
XTG  O10   O10   O  -1  1  N  N  N  143.604  55.992  131.815  -0.561   6.027   0.043  O10   XTG   5  
XTG  O11   O11   O   0  1  N  N  N  141.318  55.826  132.756   0.472   4.807   1.419  O11   XTG   6  
XTG  C17   C17   C   0  1  Y  N  N  143.630  58.674  131.972  -1.017   2.551   0.758  C17   XTG   7  
XTG  C16   C16   C   0  1  Y  N  N  143.677  60.056  131.979  -1.795   1.471   0.388  C16   XTG   8  
XTG  C15   C15   C   0  1  Y  N  N  142.550  60.789  132.331  -2.769   1.621  -0.588  C15   XTG   9  
XTG  O1    O1    O   0  1  N  N  N  142.525  62.150  132.394  -3.532   0.558  -0.957  O1    XTG  10  
XTG  C1    C1    C   0  1  N  N  S  143.790  62.849  132.701  -3.093  -0.556  -0.177  C1    XTG  11  
XTG  O5    O5    O   0  1  N  N  N  144.605  62.295  133.747  -1.749  -0.879  -0.526  O5    XTG  12  
XTG  C2    C2    C   0  1  N  N  R  143.523  64.313  133.103  -4.003  -1.756  -0.450  C2    XTG  13  
XTG  O2    O2    O   0  1  N  N  N  142.728  64.901  132.113  -5.352  -1.418  -0.125  O2    XTG  14  
XTG  C3    C3    C   0  1  N  N  S  144.833  65.072  133.241  -3.545  -2.936   0.414  C3    XTG  15  
XTG  O3    O3    O   0  1  N  N  N  144.625  66.378  133.662  -4.289  -4.105   0.063  O3    XTG  16  
XTG  C4    C4    C   0  1  N  N  S  145.681  64.286  134.193  -2.053  -3.178   0.163  C4    XTG  17  
XTG  O4    O4    O   0  1  N  N  N  146.959  64.832  134.322  -1.571  -4.176   1.065  O4    XTG  18  
XTG  C5    C5    C   0  1  N  N  S  145.842  62.930  133.562  -1.291  -1.870   0.391  C5    XTG  19  
XTG  C6    C6    C   0  1  N  N  N  147.105  62.356  134.111   0.205  -2.109   0.177  C6    XTG  20  
XTG  S6    S6    S   0  1  N  N  N  146.870  60.970  135.251   1.124  -0.602   0.595  S6    XTG  21  
XTG  C7    C7    C   0  1  N  N  R  147.709  61.192  136.910   2.816  -1.161   0.257  C7    XTG  22  
XTG  O9    O9    O   0  1  N  N  N  146.901  60.738  138.003   2.990  -1.324  -1.150  O9    XTG  23  
XTG  C11   C11   C   0  1  N  N  N  146.778  59.287  138.082   4.264  -1.931  -1.360  C11   XTG  24  
XTG  C10   C10   C   0  1  N  N  R  148.102  58.495  138.118   5.374  -0.955  -0.964  C10   XTG  25  
XTG  O8    O8    O   0  1  N  N  N  147.775  57.096  137.888   5.259   0.241  -1.738  O8    XTG  26  
XTG  C9    C9    C   0  1  N  N  S  149.079  59.022  137.036   5.238  -0.618   0.525  C9    XTG  27  
XTG  O7    O7    O   0  1  N  N  N  150.365  58.339  137.141   5.491  -1.785   1.310  O7    XTG  28  
XTG  C8    C8    C   0  1  N  N  R  149.120  60.582  137.112   3.809  -0.123   0.785  C8    XTG  29  
XTG  O6    O6    O   0  1  N  N  N  149.997  61.292  136.208   3.603   1.121   0.112  O6    XTG  30  
XTG  H14   H14   H   0  1  N  N  N  140.503  60.678  132.931  -3.729   2.979  -1.939  H14   XTG  31  
XTG  H13   H13   H   0  1  N  N  N  140.420  58.222  132.930  -2.346   4.901  -1.267  H13   XTG  32  
XTG  H17   H17   H   0  1  N  N  N  144.509  58.116  131.687  -0.255   2.434   1.514  H17   XTG  33  
XTG  H16   H16   H   0  1  N  N  N  144.590  60.566  131.711  -1.638   0.508   0.852  H16   XTG  34  
XTG  H1    H1    H   0  1  N  N  N  144.348  62.739  131.759  -3.141  -0.299   0.881  H1    XTG  35  
XTG  H2    H2    H   0  1  N  N  N  143.007  64.346  134.074  -3.939  -2.030  -1.504  H2    XTG  36  
XTG  HO2   HO2   H   0  1  N  N  N  141.850  65.034  132.449  -5.595  -0.669  -0.687  HO2   XTG  37  
XTG  H3    H3    H   0  1  N  N  N  145.342  65.167  132.271  -3.707  -2.703   1.467  H3    XTG  38  
XTG  HO3   HO3   H   0  1  N  N  N  144.577  66.402  134.611  -5.221  -3.903   0.225  HO3   XTG  39  
XTG  H4    H4    H   0  1  N  N  N  145.210  64.271  135.187  -1.905  -3.513  -0.864  H4    XTG  40  
XTG  HO4   HO4   H   0  1  N  N  N  147.339  64.956  133.460  -2.082  -4.978   0.893  HO4   XTG  41  
XTG  H5    H5    H   0  1  N  N  N  146.010  62.854  132.478  -1.460  -1.526   1.412  H5    XTG  42  
XTG  H61   1H6   H   0  1  N  N  N  147.591  63.158  134.686   0.386  -2.368  -0.866  H61   XTG  43  
XTG  H62   2H6   H   0  1  N  N  N  147.707  61.996  133.264   0.538  -2.927   0.817  H62   XTG  44  
XTG  H7    H7    H   0  1  N  N  N  147.843  62.284  136.901   2.990  -2.114   0.756  H7    XTG  45  
XTG  H111  1H11  H   0  0  N  N  N  146.269  58.979  137.157   4.370  -2.193  -2.412  H111  XTG  46  
XTG  H112  2H11  H   0  0  N  N  N  146.232  59.054  139.008   4.340  -2.832  -0.752  H112  XTG  47  
XTG  H10   H10   H   0  1  N  N  N  148.602  58.615  139.090   6.346  -1.415  -1.146  H10   XTG  48  
XTG  HO8   HO8   H   0  1  N  N  N  147.704  56.936  136.954   5.347  -0.017  -2.665  HO8   XTG  49  
XTG  H9    H9    H   0  1  N  N  N  148.735  58.785  136.018   5.950   0.164   0.792  H9    XTG  50  
XTG  HO7   HO7   H   0  1  N  N  N  150.717  58.191  136.271   6.398  -2.061   1.116  HO7   XTG  51  
XTG  H8    H8    H   0  1  N  N  N  149.534  60.725  138.121   3.659   0.013   1.856  H8    XTG  52  
XTG  HO6   HO6   H   0  1  N  N  N  149.547  61.448  135.386   2.693   1.392   0.297  HO6   XTG  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XTG  C14  C13   DOUB  Y  N   1  
XTG  C14  C15   SING  Y  N   2  
XTG  C14  H14   SING  N  N   3  
XTG  C13  C12   SING  Y  N   4  
XTG  C13  H13   SING  N  N   5  
XTG  C12  N1    SING  N  N   6  
XTG  C12  C17   DOUB  Y  N   7  
XTG  N1   O10   SING  N  N   8  
XTG  N1   O11   DOUB  N  N   9  
XTG  C17  C16   SING  Y  N  10  
XTG  C17  H17   SING  N  N  11  
XTG  C16  C15   DOUB  Y  N  12  
XTG  C16  H16   SING  N  N  13  
XTG  C15  O1    SING  N  N  14  
XTG  O1   C1    SING  N  N  15  
XTG  C1   O5    SING  N  N  16  
XTG  C1   C2    SING  N  N  17  
XTG  C1   H1    SING  N  N  18  
XTG  O5   C5    SING  N  N  19  
XTG  C2   O2    SING  N  N  20  
XTG  C2   C3    SING  N  N  21  
XTG  C2   H2    SING  N  N  22  
XTG  O2   HO2   SING  N  N  23  
XTG  C3   O3    SING  N  N  24  
XTG  C3   C4    SING  N  N  25  
XTG  C3   H3    SING  N  N  26  
XTG  O3   HO3   SING  N  N  27  
XTG  C4   O4    SING  N  N  28  
XTG  C4   C5    SING  N  N  29  
XTG  C4   H4    SING  N  N  30  
XTG  O4   HO4   SING  N  N  31  
XTG  C5   C6    SING  N  N  32  
XTG  C5   H5    SING  N  N  33  
XTG  C6   S6    SING  N  N  34  
XTG  C6   H61   SING  N  N  35  
XTG  C6   H62   SING  N  N  36  
XTG  S6   C7    SING  N  N  37  
XTG  C7   O9    SING  N  N  38  
XTG  C7   C8    SING  N  N  39  
XTG  C7   H7    SING  N  N  40  
XTG  O9   C11   SING  N  N  41  
XTG  C11  C10   SING  N  N  42  
XTG  C11  H111  SING  N  N  43  
XTG  C11  H112  SING  N  N  44  
XTG  C10  O8    SING  N  N  45  
XTG  C10  C9    SING  N  N  46  
XTG  C10  H10   SING  N  N  47  
XTG  O8   HO8   SING  N  N  48  
XTG  C9   O7    SING  N  N  49  
XTG  C9   C8    SING  N  N  50  
XTG  C9   H9    SING  N  N  51  
XTG  O7   HO7   SING  N  N  52  
XTG  C8   O6    SING  N  N  53  
XTG  C8   H8    SING  N  N  54  
XTG  O6   HO6   SING  N  N  55  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XTG  SMILES            ACDLabs               10.04  "[O-][N+](=O)c3ccc(OC2OC(CSC1OCC(O)C(O)C1O)C(O)C(O)C2O)cc3"  
XTG  SMILES_CANONICAL  CACTVS                3.341  "O[C@@H]1CO[C@H](SC[C@H]2O[C@@H](Oc3ccc(cc3)[N+]([O-])=O)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@H]1O"  
XTG  SMILES            CACTVS                3.341  "O[CH]1CO[CH](SC[CH]2O[CH](Oc3ccc(cc3)[N+]([O-])=O)[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O"  
XTG  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1cc(ccc1[N+](=O)[O-])O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CS[C@@H]3[C@@H]([C@H]([C@@H](CO3)O)O)O)O)O)O"  
XTG  SMILES            "OpenEye OEToolkits"  1.5.0  "c1cc(ccc1[N+](=O)[O-])OC2C(C(C(C(O2)CSC3C(C(C(CO3)O)O)O)O)O)O"  
XTG  InChI             InChI                 1.03   "InChI=1S/C17H23NO11S/c19-9-5-27-17(15(24)11(9)20)30-6-10-12(21)13(22)14(23)16(29-10)28-8-3-1-7(2-4-8)18(25)26/h1-4,9-17,19-24H,5-6H2/t9-,10-,11+,12-,13+,14-,15-,16-,17-/m1/s1"  
XTG  InChIKey          InChI                 1.03   HQYVHBCTLFPWRQ-ZMFOIVQCSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XTG  "SYSTEMATIC NAME"  ACDLabs               10.04  "4-nitrophenyl 6-thio-6-S-alpha-D-xylopyranosyl-beta-D-glucopyranoside"  
XTG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,3R,4S,5S,6S)-2-(4-nitrophenoxy)-6-[[(2R,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]sulfanylmethyl]oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XTG  "Create component"   2005-11-17  RCSB  
XTG  "Modify descriptor"  2011-06-04  RCSB  
XTG  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     XTG
_pdbx_chem_comp_synonyms.name        "4-NITROPHENYL-(6-S-ALPHA-D-XYLOPYRANOSYL)-BETA-D-GLUCOPYRANOSIDE"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
