data_WCG
#

_chem_comp.id                                   WCG
_chem_comp.name                                 "(1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H21 O14 P3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-10-13
_chem_comp.pdbx_modified_date                   2021-06-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       530.251
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    WCG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KEE
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WCG  C01  C1   C  0  1  N  N  N  170.683   -6.417  51.102   6.713  -1.546  -3.016  C01  WCG   1  
WCG  C03  C2   C  0  1  Y  N  N  169.148   -7.409  52.648   5.424  -0.371  -1.401  C03  WCG   2  
WCG  C04  C3   C  0  1  Y  N  N  169.949   -8.610  52.687   6.392   0.592  -1.427  C04  WCG   3  
WCG  C05  C4   C  0  1  Y  N  N  169.867   -9.455  53.744   6.260   1.731  -0.616  C05  WCG   4  
WCG  C06  C5   C  0  1  Y  N  N  170.698  -10.704  53.781   7.235   2.743  -0.617  C06  WCG   5  
WCG  C07  C6   C  0  1  Y  N  N  170.610  -11.548  54.845   7.076   3.833   0.182  C07  WCG   6  
WCG  C08  C7   C  0  1  Y  N  N  169.689  -11.235  55.975   5.958   3.963   1.004  C08  WCG   7  
WCG  C09  C8   C  0  1  Y  N  N  168.926  -10.091  55.942   4.993   3.002   1.031  C09  WCG   8  
WCG  C10  C9   C  0  1  Y  N  N  169.021   -9.167  54.780   5.123   1.863   0.220  C10  WCG   9  
WCG  C11  C10  C  0  1  Y  N  N  168.249   -8.008  54.746   4.146   0.852   0.222  C11  WCG  10  
WCG  C12  C11  C  0  1  Y  N  N  168.323   -7.125  53.669   4.302  -0.239  -0.575  C12  WCG  11  
WCG  C13  C12  C  0  1  N  N  S  167.416   -5.846  53.716   3.252  -1.320  -0.570  C13  WCG  12  
WCG  C15  C13  C  0  1  N  N  R  167.276   -3.572  53.960   1.334  -1.832   0.623  C15  WCG  13  
WCG  C16  C14  C  0  1  N  N  N  167.775   -2.245  53.559   0.288  -1.248   1.574  C16  WCG  14  
WCG  C30  C15  C  0  1  N  N  S  167.674   -3.880  55.160   2.484  -2.500   1.419  C30  WCG  15  
WCG  C32  C16  C  0  1  N  N  R  167.286   -5.374  55.196   3.657  -2.438   0.411  C32  WCG  16  
WCG  O02  O1   O  0  1  N  N  N  169.285   -6.546  51.503   5.549  -1.470  -2.190  O02  WCG  17  
WCG  O14  O2   O  0  1  N  N  N  167.905   -4.801  53.096   2.000  -0.783  -0.112  O14  WCG  18  
WCG  O17  O3   O  0  1  N  N  N  166.918   -1.708  52.522  -0.814  -0.742   0.818  O17  WCG  19  
WCG  O19  O4   O  0  1  N  N  N  166.292   -2.340  50.122  -2.687  -0.979   2.493  O19  WCG  20  
WCG  O20  O5   O  0  1  N  N  N  167.848   -0.422  50.440  -1.658   1.311   2.227  O20  WCG  21  
WCG  O21  O6   O  0  1  N  N  N  168.712   -2.866  50.841  -3.195   0.275   0.362  O21  WCG  22  
WCG  O23  O7   O  0  1  N  N  N  170.518   -1.570  52.290  -4.919   2.223   0.743  O23  WCG  23  
WCG  O24  O8   O  0  1  N  N  N  170.443   -1.187  49.835  -5.445  -0.149   1.426  O24  WCG  24  
WCG  O25  O9   O  0  1  N  N  N  171.480   -3.343  50.742  -5.413   0.361  -1.046  O25  WCG  25  
WCG  O27  O10  O  0  1  N  N  N  174.054   -3.730  50.890  -7.541   1.702  -1.811  O27  WCG  26  
WCG  O28  O11  O  0  1  N  N  N  173.159   -1.477  51.203  -6.936  -0.577  -2.973  O28  WCG  27  
WCG  O29  O12  O  0  1  N  N  N  173.119   -2.496  48.962  -7.742  -0.494  -0.583  O29  WCG  28  
WCG  O31  O13  O  0  1  N  N  N  166.924   -3.093  56.177   2.160  -3.854   1.742  O31  WCG  29  
WCG  O33  O14  O  0  1  N  N  N  166.001   -5.490  55.604   3.791  -3.683  -0.278  O33  WCG  30  
WCG  P18  P1   P  0  1  N  N  N  167.404   -1.832  50.941  -2.101  -0.054   1.497  P18  WCG  31  
WCG  P22  P2   P  0  1  N  N  N  170.297   -2.231  50.957  -4.758   0.660   0.394  P22  WCG  32  
WCG  P26  P3   P  0  1  N  N  N  172.998   -2.758  50.445  -6.926   0.232  -1.582  P26  WCG  33  
WCG  H1   H1   H  0  1  N  N  N  170.754   -5.754  50.227   6.734  -0.694  -3.694  H1   WCG  34  
WCG  H2   H2   H  0  1  N  N  N  171.265   -5.992  51.933   7.604  -1.533  -2.388  H2   WCG  35  
WCG  H3   H3   H  0  1  N  N  N  171.083   -7.409  50.844   6.689  -2.470  -3.593  H3   WCG  36  
WCG  H4   H4   H  0  1  N  N  N  170.617   -8.836  51.869   7.253   0.478  -2.068  H4   WCG  37  
WCG  H5   H5   H  0  1  N  N  N  171.366  -10.933  52.964   8.108   2.656  -1.248  H5   WCG  38  
WCG  H6   H6   H  0  1  N  N  N  171.209  -12.447  54.871   7.826   4.609   0.180  H6   WCG  39  
WCG  H7   H7   H  0  1  N  N  N  169.621  -11.906  56.819   5.855   4.838   1.629  H7   WCG  40  
WCG  H8   H8   H  0  1  N  N  N  168.258   -9.864  56.760   4.132   3.116   1.674  H8   WCG  41  
WCG  H9   H9   H  0  1  N  N  N  167.582   -7.790  55.567   3.275   0.941   0.854  H9   WCG  42  
WCG  H10  H10  H  0  1  N  N  N  166.416   -6.117  53.347   3.138  -1.730  -1.573  H10  WCG  43  
WCG  H11  H11  H  0  1  N  N  N  166.182   -3.608  53.854   0.874  -2.546  -0.060  H11  WCG  44  
WCG  H12  H12  H  0  1  N  N  N  168.802   -2.338  53.176  -0.062  -2.027   2.251  H12  WCG  45  
WCG  H13  H13  H  0  1  N  N  N  167.768   -1.571  54.428   0.734  -0.438   2.152  H13  WCG  46  
WCG  H14  H14  H  0  1  N  N  N  168.758   -3.772  55.309   2.715  -1.931   2.320  H14  WCG  47  
WCG  H15  H15  H  0  1  N  N  N  167.991   -5.932  55.830   4.585  -2.181   0.920  H15  WCG  48  
WCG  H16  H16  H  0  1  N  N  N  167.311   -0.165  49.700  -1.265   1.965   1.633  H16  WCG  49  
WCG  H17  H17  H  0  1  N  N  N  170.701   -0.647  52.160  -4.492   2.814   0.107  H17  WCG  50  
WCG  H18  H18  H  0  1  N  N  N  174.586   -3.984  50.145  -7.056   2.236  -2.455  H18  WCG  51  
WCG  H19  H19  H  0  1  N  N  N  173.304   -0.764  50.593  -7.817  -0.693  -3.355  H19  WCG  52  
WCG  H20  H20  H  0  1  N  N  N  167.226   -3.329  57.046   2.849  -4.315   2.241  H20  WCG  53  
WCG  H21  H21  H  0  1  N  N  N  165.927   -5.201  56.506   4.044  -4.422   0.291  H21  WCG  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WCG  O29  P26  DOUB  N  N   1  
WCG  O24  P22  DOUB  N  N   2  
WCG  O19  P18  DOUB  N  N   3  
WCG  O20  P18  SING  N  N   4  
WCG  P26  O25  SING  N  N   5  
WCG  P26  O27  SING  N  N   6  
WCG  P26  O28  SING  N  N   7  
WCG  O25  P22  SING  N  N   8  
WCG  O21  P18  SING  N  N   9  
WCG  O21  P22  SING  N  N  10  
WCG  P18  O17  SING  N  N  11  
WCG  P22  O23  SING  N  N  12  
WCG  C01  O02  SING  N  N  13  
WCG  O02  C03  SING  N  N  14  
WCG  O17  C16  SING  N  N  15  
WCG  C03  C04  DOUB  Y  N  16  
WCG  C03  C12  SING  Y  N  17  
WCG  C04  C05  SING  Y  N  18  
WCG  O14  C13  SING  N  N  19  
WCG  O14  C15  SING  N  N  20  
WCG  C16  C15  SING  N  N  21  
WCG  C12  C13  SING  N  N  22  
WCG  C12  C11  DOUB  Y  N  23  
WCG  C13  C32  SING  N  N  24  
WCG  C05  C06  DOUB  Y  N  25  
WCG  C05  C10  SING  Y  N  26  
WCG  C06  C07  SING  Y  N  27  
WCG  C15  C30  SING  N  N  28  
WCG  C11  C10  SING  Y  N  29  
WCG  C10  C09  DOUB  Y  N  30  
WCG  C07  C08  DOUB  Y  N  31  
WCG  C30  C32  SING  N  N  32  
WCG  C30  O31  SING  N  N  33  
WCG  C32  O33  SING  N  N  34  
WCG  C09  C08  SING  Y  N  35  
WCG  C01  H1   SING  N  N  36  
WCG  C01  H2   SING  N  N  37  
WCG  C01  H3   SING  N  N  38  
WCG  C04  H4   SING  N  N  39  
WCG  C06  H5   SING  N  N  40  
WCG  C07  H6   SING  N  N  41  
WCG  C08  H7   SING  N  N  42  
WCG  C09  H8   SING  N  N  43  
WCG  C11  H9   SING  N  N  44  
WCG  C13  H10  SING  N  N  45  
WCG  C15  H11  SING  N  N  46  
WCG  C16  H12  SING  N  N  47  
WCG  C16  H13  SING  N  N  48  
WCG  C30  H14  SING  N  N  49  
WCG  C32  H15  SING  N  N  50  
WCG  O20  H16  SING  N  N  51  
WCG  O23  H17  SING  N  N  52  
WCG  O27  H18  SING  N  N  53  
WCG  O28  H19  SING  N  N  54  
WCG  O31  H20  SING  N  N  55  
WCG  O33  H21  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WCG  SMILES            ACDLabs               12.01  "COc2cc1ccccc1cc2C3C(C(C(COP(=O)(O)OP(O)(=O)OP(O)(O)=O)O3)O)O"  
WCG  InChI             InChI                 1.03   "InChI=1S/C16H21O14P3/c1-26-12-7-10-5-3-2-4-9(10)6-11(12)16-15(18)14(17)13(28-16)8-27-32(22,23)30-33(24,25)29-31(19,20)21/h2-7,13-18H,8H2,1H3,(H,22,23)(H,24,25)(H2,19,20,21)/t13-,14-,15-,16+/m1/s1"  
WCG  InChIKey          InChI                 1.03   CCJNXXZRNQFAFA-FPCVCCKLSA-N  
WCG  SMILES_CANONICAL  CACTVS                3.385  "COc1cc2ccccc2cc1[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O"  
WCG  SMILES            CACTVS                3.385  "COc1cc2ccccc2cc1[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O"  
WCG  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1cc2ccccc2cc1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O"  
WCG  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1cc2ccccc2cc1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
WCG  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol"  
WCG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[[(2~{R},3~{S},4~{R},5~{S})-5-(3-methoxynaphthalen-2-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WCG  "Create component"  2020-10-13  RCSB  
WCG  "Initial release"   2021-06-23  RCSB  
##
