data_RUG
#

_chem_comp.id                                   RUG
_chem_comp.name                                 "1-beta-D-glucopyranosyl-4-(hydroxymethyl)-1H-1,2,3-triazole"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C9 H15 N3 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;1-beta-D-glucosyl-4-(hydroxymethyl)-1H-1,2,3-triazole; 1-D-glucosyl-4-(hydroxymethyl)-1H-1,2,3-triazole;
1-glucosyl-4-(hydroxymethyl)-1H-1,2,3-triazole
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-02-05
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       261.232
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RUG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3G2I
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  RUG  "1-beta-D-glucosyl-4-(hydroxymethyl)-1H-1,2,3-triazole"  PDB  ?  
2  RUG  "1-D-glucosyl-4-(hydroxymethyl)-1H-1,2,3-triazole"       PDB  ?  
3  RUG  "1-glucosyl-4-(hydroxymethyl)-1H-1,2,3-triazole"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RUG  O2   O2   O  0  1  N  N  N  33.725  24.413  25.916  -0.005   2.521  -0.428  O2   RUG   1  
RUG  C2   C2   C  0  1  N  N  R  33.529  23.025  26.203   0.707   1.411   0.123  C2   RUG   2  
RUG  C3   C3   C  0  1  N  N  S  32.405  22.427  25.334   2.156   1.435  -0.373  C3   RUG   3  
RUG  O3   O3   O  0  1  N  N  N  32.748  22.490  23.951   2.804   2.617   0.102  O3   RUG   4  
RUG  C4   C4   C  0  1  N  N  S  32.173  20.963  25.718   2.888   0.200   0.161  C4   RUG   5  
RUG  O4   O4   O  0  1  N  N  N  31.018  20.499  25.041   4.220   0.174  -0.355  O4   RUG   6  
RUG  C5   C5   C  0  1  N  N  R  31.977  20.811  27.238   2.141  -1.059  -0.288  C5   RUG   7  
RUG  C6   C6   C  0  1  N  N  N  31.823  19.354  27.670   2.832  -2.295   0.292  C6   RUG   8  
RUG  O6   O6   O  0  1  N  N  N  32.884  18.575  27.112   2.207  -3.474  -0.220  O6   RUG   9  
RUG  O5   O5   O  0  1  N  N  N  33.126  21.371  27.909   0.792  -1.003   0.181  O5   RUG  10  
RUG  C1   C1   C  0  1  N  N  R  33.203  22.810  27.697   0.045   0.105  -0.324  C1   RUG  11  
RUG  N1   N1   N  0  1  Y  N  N  34.247  23.315  28.608  -1.324   0.049   0.196  N1   RUG  12  
RUG  C7   C7   C  0  1  Y  N  N  35.570  23.216  28.475  -2.444  -0.142  -0.540  C7   RUG  13  
RUG  N2   N2   N  0  1  Y  N  N  33.972  23.885  29.671  -1.667   0.166   1.431  N2   RUG  14  
RUG  N3   N3   N  0  1  Y  N  N  35.010  24.202  30.269  -2.944   0.069   1.547  N3   RUG  15  
RUG  C8   C8   C  0  1  Y  N  N  36.062  23.800  29.555  -3.476  -0.124   0.335  C8   RUG  16  
RUG  C9   C9   C  0  1  N  N  N  37.538  23.979  29.905  -4.938  -0.294   0.008  C9   RUG  17  
RUG  O9   O9   O  0  1  N  N  N  37.689  24.103  31.321  -5.092  -0.481  -1.400  O9   RUG  18  
RUG  HO2  HO2  H  0  1  N  Y  N  33.768  24.902  26.729   0.361   3.382  -0.185  HO2  RUG  19  
RUG  H2   H2   H  0  1  N  N  N  34.470  22.506  25.965   0.693   1.473   1.211  H2   RUG  20  
RUG  H3   H3   H  0  1  N  N  N  31.490  23.013  25.507   2.169   1.424  -1.463  H3   RUG  21  
RUG  HO3  HO3  H  0  1  N  Y  N  31.955  22.504  23.428   2.389   3.439  -0.193  HO3  RUG  22  
RUG  H4   H4   H  0  1  N  N  N  33.055  20.372  25.430   2.918   0.237   1.250  H4   RUG  23  
RUG  HO4  HO4  H  0  1  N  Y  N  30.307  20.395  25.662   4.751   0.946  -0.113  HO4  RUG  24  
RUG  H5   H5   H  0  1  N  N  N  31.050  21.338  27.508   2.147  -1.117  -1.376  H5   RUG  25  
RUG  H61  H6   H  0  1  N  N  N  31.861  19.291  28.768   3.884  -2.290   0.008  H61  RUG  26  
RUG  H62  H6A  H  0  1  N  N  N  30.858  18.966  27.313   2.748  -2.282   1.379  H62  RUG  27  
RUG  HO6  HO6  H  0  1  N  Y  N  32.703  18.402  26.196   2.594  -4.298   0.106  HO6  RUG  28  
RUG  H1   H1   H  0  1  N  N  N  32.272  23.354  27.916   0.023   0.063  -1.413  H1   RUG  29  
RUG  H7   H7   H  0  1  N  N  N  36.119  22.760  27.664  -2.502  -0.280  -1.609  H7   RUG  30  
RUG  H9   H9   H  0  1  N  N  N  38.105  23.104  29.553  -5.330  -1.163   0.536  H9   RUG  31  
RUG  H9A  H9A  H  0  1  N  N  N  37.919  24.889  29.418  -5.485   0.597   0.318  H9A  RUG  32  
RUG  HO9  HO9  H  0  1  N  N  N  38.613  24.131  31.540  -6.010  -0.597  -1.683  HO9  RUG  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RUG  O2  C2   SING  N  N   1  
RUG  O2  HO2  SING  N  N   2  
RUG  C3  C2   SING  N  N   3  
RUG  C2  C1   SING  N  N   4  
RUG  C2  H2   SING  N  N   5  
RUG  O3  C3   SING  N  N   6  
RUG  C3  C4   SING  N  N   7  
RUG  C3  H3   SING  N  N   8  
RUG  O3  HO3  SING  N  N   9  
RUG  O4  C4   SING  N  N  10  
RUG  C4  C5   SING  N  N  11  
RUG  C4  H4   SING  N  N  12  
RUG  O4  HO4  SING  N  N  13  
RUG  C5  C6   SING  N  N  14  
RUG  C5  O5   SING  N  N  15  
RUG  C5  H5   SING  N  N  16  
RUG  O6  C6   SING  N  N  17  
RUG  C6  H61  SING  N  N  18  
RUG  C6  H62  SING  N  N  19  
RUG  O6  HO6  SING  N  N  20  
RUG  C1  O5   SING  N  N  21  
RUG  C1  N1   SING  N  N  22  
RUG  C1  H1   SING  N  N  23  
RUG  C7  N1   SING  Y  N  24  
RUG  N1  N2   SING  Y  N  25  
RUG  C7  C8   DOUB  Y  N  26  
RUG  C7  H7   SING  N  N  27  
RUG  N2  N3   DOUB  Y  N  28  
RUG  C8  N3   SING  Y  N  29  
RUG  C8  C9   SING  N  N  30  
RUG  C9  O9   SING  N  N  31  
RUG  C9  H9   SING  N  N  32  
RUG  C9  H9A  SING  N  N  33  
RUG  O9  HO9  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RUG  SMILES            ACDLabs               10.04  "n1nn(cc1CO)C2OC(C(O)C(O)C2O)CO"  
RUG  SMILES_CANONICAL  CACTVS                3.341  "OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)n2cc(CO)nn2"  
RUG  SMILES            CACTVS                3.341  "OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)n2cc(CO)nn2"  
RUG  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1c(nnn1[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)CO"  
RUG  SMILES            "OpenEye OEToolkits"  1.5.0  "c1c(nnn1C2C(C(C(C(O2)CO)O)O)O)CO"  
RUG  InChI             InChI                 1.03   "InChI=1S/C9H15N3O6/c13-2-4-1-12(11-10-4)9-8(17)7(16)6(15)5(3-14)18-9/h1,5-9,13-17H,2-3H2/t5-,6-,7+,8-,9-/m1/s1"  
RUG  InChIKey          InChI                 1.03   BHGZOVXPACYZLI-SYHAXYEDSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RUG  "SYSTEMATIC NAME"  ACDLabs               10.04  "1-beta-D-glucopyranosyl-4-(hydroxymethyl)-1H-1,2,3-triazole"  
RUG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[4-(hydroxymethyl)-1,2,3-triazol-1-yl]oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
RUG  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
RUG  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
RUG  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
RUG  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RUG  "Create component"          2009-02-05  RCSB  
RUG  "Modify descriptor"         2011-06-04  RCSB  
RUG  "Other modification"        2020-07-03  RCSB  
RUG  "Modify synonyms"           2020-07-17  RCSB  
RUG  "Modify internal type"      2020-07-17  RCSB  
RUG  "Modify linking type"       2020-07-17  RCSB  
RUG  "Modify atom id"            2020-07-17  RCSB  
RUG  "Modify component atom id"  2020-07-17  RCSB  
RUG  "Modify leaving atom flag"  2020-07-17  RCSB  
##
