data_RGG
#

_chem_comp.id                                   RGG
_chem_comp.name                                 "(2R)-2,3-dihydroxypropyl beta-D-galactopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C9 H18 O8"
_chem_comp.mon_nstd_parent_comp_id              GAL
_chem_comp.pdbx_synonyms                        
;(2R)-glyceryl-beta-D-galactopyranoside; (2R)-2,3-dihydroxypropyl beta-D-galactoside; (2R)-2,3-dihydroxypropyl
D-galactoside; (2R)-2,3-dihydroxypropyl galactoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-02-19
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       254.234
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RGG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3GA5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  RGG  "(2R)-glyceryl-beta-D-galactopyranoside"       PDB  ?  
2  RGG  "(2R)-2,3-dihydroxypropyl beta-D-galactoside"  PDB  ?  
3  RGG  "(2R)-2,3-dihydroxypropyl D-galactoside"       PDB  ?  
4  RGG  "(2R)-2,3-dihydroxypropyl galactoside"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RGG  "O3'"   "O3'"   O  0  1  N  N  N  -1.007  -5.218  -2.931   5.811  -0.041  -0.062  "O3'"   RGG   1  
RGG  "C3'"   "C3'"   C  0  1  N  N  N  -0.182  -4.104  -2.558   4.549   0.444  -0.525  "C3'"   RGG   2  
RGG  "C2'"   "C2'"   C  0  1  N  N  R   0.603  -4.491  -1.314   3.424  -0.384   0.099  "C2'"   RGG   3  
RGG  "O2'"   "O2'"   O  0  1  N  N  N   1.730  -3.607  -1.203   3.412  -0.182   1.513  "O2'"   RGG   4  
RGG  "C1'"   "C1'"   C  0  1  N  N  N  -0.348  -4.305  -0.134   2.082   0.053  -0.491  "C1'"   RGG   5  
RGG  O1      O1      O  0  1  N  N  N   0.339  -4.546   1.079   1.045  -0.798   0.004  O1      RGG   6  
RGG  C1      C1      C  0  1  N  N  R  -0.417  -4.305   2.267  -0.257  -0.473  -0.489  C1      RGG   7  
RGG  C2      C2      C  0  1  N  N  R   0.382  -4.836   3.455  -1.263  -1.517   0.003  C2      RGG   8  
RGG  O2      O2      O  0  1  N  N  N   0.344  -6.273   3.408  -0.915  -2.800  -0.522  O2      RGG   9  
RGG  C3      C3      C  0  1  N  N  S  -0.186  -4.390   4.793  -2.664  -1.130  -0.478  C3      RGG  10  
RGG  O3      O3      O  0  1  N  N  N   0.731  -4.737   5.849  -3.621  -2.058   0.038  O3      RGG  11  
RGG  C4      C4      C  0  1  N  N  R  -0.447  -2.886   4.792  -2.995   0.278   0.026  C4      RGG  12  
RGG  O4      O4      O  0  1  N  N  N   0.797  -2.178   4.710  -3.022   0.280   1.454  O4      RGG  13  
RGG  C5      C5      C  0  1  N  N  R  -1.333  -2.508   3.609  -1.921   1.253  -0.467  C5      RGG  14  
RGG  O5      O5      O  0  1  N  N  N  -0.689  -2.898   2.387  -0.639   0.818  -0.010  O5      RGG  15  
RGG  C6      C6      C  0  1  N  N  N  -1.566  -0.996   3.591  -2.211   2.651   0.082  C6      RGG  16  
RGG  O6      O6      O  0  1  N  N  N  -2.077  -0.572   2.316  -1.278   3.582  -0.470  O6      RGG  17  
RGG  "HO3'"  "HO3'"  H  0  0  N  N  N  -1.189  -5.180  -3.863   6.572   0.439  -0.418  "HO3'"  RGG  18  
RGG  "H3'"   "H3'"   H  0  1  N  N  N   0.510  -3.860  -3.377   4.434   1.489  -0.236  "H3'"   RGG  19  
RGG  "H3'A"  "H3'A"  H  0  0  N  N  N  -0.806  -3.221  -2.354   4.503   0.360  -1.610  "H3'A"  RGG  20  
RGG  "H2'"   "H2'"   H  0  1  N  N  N   0.973  -5.526  -1.348   3.589  -1.440  -0.116  "H2'"   RGG  21  
RGG  "HO2'"  "HO2'"  H  0  0  N  N  N   2.067  -3.412  -2.070   3.270   0.737   1.778  "HO2'"  RGG  22  
RGG  "H1'"   "H1'"   H  0  1  N  N  N  -0.734  -3.275  -0.136   1.876   1.083  -0.201  "H1'"   RGG  23  
RGG  "H1'A"  "H1'A"  H  0  0  N  N  N  -1.183  -5.015  -0.225   2.122  -0.018  -1.578  "H1'A"  RGG  24  
RGG  H1      H1      H  0  1  N  N  N  -1.386  -4.824   2.233  -0.242  -0.468  -1.579  H1      RGG  25  
RGG  H2      H2      H  0  1  N  N  N   1.405  -4.439   3.378  -1.248  -1.553   1.092  H2      RGG  26  
RGG  HO2     HO2     H  0  1  N  Y  N   0.336  -6.561   2.503  -0.036  -3.107  -0.260  HO2     RGG  27  
RGG  H3      H3      H  0  1  N  N  N  -1.143  -4.905   4.962  -2.693  -1.145  -1.568  H3      RGG  28  
RGG  HO3     HO3     H  0  1  N  Y  N   1.609  -4.813   5.494  -3.468  -2.973  -0.236  HO3     RGG  29  
RGG  H4      H4      H  0  1  N  N  N  -0.961  -2.613   5.725  -3.968   0.584  -0.357  H4      RGG  30  
RGG  HO4     HO4     H  0  1  N  Y  N   1.013  -2.021   3.798  -3.677  -0.320   1.836  HO4     RGG  31  
RGG  H5      H5      H  0  1  N  N  N  -2.299  -3.024   3.706  -1.929   1.281  -1.556  H5      RGG  32  
RGG  H61     H6      H  0  1  N  N  N  -2.294  -0.736   4.373  -3.224   2.946  -0.191  H61     RGG  33  
RGG  H62     H6A     H  0  1  N  N  N  -0.607  -0.489   3.773  -2.116   2.642   1.168  H62     RGG  34  
RGG  HO6     HO6     H  0  1  N  Y  N  -3.021  -0.478   2.368  -1.403   4.491  -0.165  HO6     RGG  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RGG  "O3'"  "C3'"   SING  N  N   1  
RGG  "C3'"  "C2'"   SING  N  N   2  
RGG  "C2'"  "O2'"   SING  N  N   3  
RGG  "C2'"  "C1'"   SING  N  N   4  
RGG  "C1'"  O1      SING  N  N   5  
RGG  O1     C1      SING  N  N   6  
RGG  C1     C2      SING  N  N   7  
RGG  C1     O5      SING  N  N   8  
RGG  C2     O2      SING  N  N   9  
RGG  C2     C3      SING  N  N  10  
RGG  C3     O3      SING  N  N  11  
RGG  C3     C4      SING  N  N  12  
RGG  C4     O4      SING  N  N  13  
RGG  C4     C5      SING  N  N  14  
RGG  C5     O5      SING  N  N  15  
RGG  C5     C6      SING  N  N  16  
RGG  C6     O6      SING  N  N  17  
RGG  "O3'"  "HO3'"  SING  N  N  18  
RGG  "C3'"  "H3'"   SING  N  N  19  
RGG  "C3'"  "H3'A"  SING  N  N  20  
RGG  "C2'"  "H2'"   SING  N  N  21  
RGG  "O2'"  "HO2'"  SING  N  N  22  
RGG  "C1'"  "H1'"   SING  N  N  23  
RGG  "C1'"  "H1'A"  SING  N  N  24  
RGG  C1     H1      SING  N  N  25  
RGG  C2     H2      SING  N  N  26  
RGG  O2     HO2     SING  N  N  27  
RGG  C3     H3      SING  N  N  28  
RGG  O3     HO3     SING  N  N  29  
RGG  C4     H4      SING  N  N  30  
RGG  O4     HO4     SING  N  N  31  
RGG  C5     H5      SING  N  N  32  
RGG  C6     H61     SING  N  N  33  
RGG  C6     H62     SING  N  N  34  
RGG  O6     HO6     SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RGG  SMILES            ACDLabs               10.04  "O(CC(O)CO)C1OC(C(O)C(O)C1O)CO"  
RGG  SMILES_CANONICAL  CACTVS                3.341  "OC[C@@H](O)CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O"  
RGG  SMILES            CACTVS                3.341  "OC[CH](O)CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O"  
RGG  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)OC[C@@H](CO)O)O)O)O)O"  
RGG  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C(O1)OCC(CO)O)O)O)O)O"  
RGG  InChI             InChI                 1.03   "InChI=1S/C9H18O8/c10-1-4(12)3-16-9-8(15)7(14)6(13)5(2-11)17-9/h4-15H,1-3H2/t4-,5-,6+,7+,8-,9-/m1/s1"  
RGG  InChIKey          InChI                 1.03   NHJUPBDCSOGIKX-NTXXKDEISA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RGG  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R)-2,3-dihydroxypropyl beta-D-galactopyranoside"  
RGG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3R,4S,5R,6R)-2-[(2R)-2,3-dihydroxypropoxy]-6-(hydroxymethyl)oxane-3,4,5-triol"  
#
_pdbx_chem_comp_related.comp_id            RGG
_pdbx_chem_comp_related.related_comp_id    GAL
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  RGG  C1   GAL  C1   "Carbohydrate core"  
 2  RGG  C2   GAL  C2   "Carbohydrate core"  
 3  RGG  C3   GAL  C3   "Carbohydrate core"  
 4  RGG  C4   GAL  C4   "Carbohydrate core"  
 5  RGG  C5   GAL  C5   "Carbohydrate core"  
 6  RGG  C6   GAL  C6   "Carbohydrate core"  
 7  RGG  O1   GAL  O1   "Carbohydrate core"  
 8  RGG  O2   GAL  O2   "Carbohydrate core"  
 9  RGG  O3   GAL  O3   "Carbohydrate core"  
10  RGG  O4   GAL  O4   "Carbohydrate core"  
11  RGG  O5   GAL  O5   "Carbohydrate core"  
12  RGG  O6   GAL  O6   "Carbohydrate core"  
13  RGG  H1   GAL  H1   "Carbohydrate core"  
14  RGG  H2   GAL  H2   "Carbohydrate core"  
15  RGG  H3   GAL  H3   "Carbohydrate core"  
16  RGG  H4   GAL  H4   "Carbohydrate core"  
17  RGG  H5   GAL  H5   "Carbohydrate core"  
18  RGG  H61  GAL  H61  "Carbohydrate core"  
19  RGG  H62  GAL  H62  "Carbohydrate core"  
20  RGG  HO2  GAL  HO2  "Carbohydrate core"  
21  RGG  HO3  GAL  HO3  "Carbohydrate core"  
22  RGG  HO4  GAL  HO4  "Carbohydrate core"  
23  RGG  HO6  GAL  HO6  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
RGG  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
RGG  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
RGG  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
RGG  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RGG  "Create component"          2009-02-19  PDBJ  
RGG  "Modify descriptor"         2011-06-04  RCSB  
RGG  "Other modification"        2020-07-03  RCSB  
RGG  "Modify parent residue"     2020-07-17  RCSB  
RGG  "Modify synonyms"           2020-07-17  RCSB  
RGG  "Modify atom id"            2020-07-17  RCSB  
RGG  "Modify component atom id"  2020-07-17  RCSB  
RGG  "Modify leaving atom flag"  2020-07-17  RCSB  
##
